EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000029666 (Gene tree)
Gene ID: 108433844
Gene Symbol: srfbp1
Alias: fc54c06|wu:fc54c06|zgc:56062
Full Name: serum response factor binding protein 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 7537 bases
Position: chrKV575429.1:1012644-1020180
Accession: 108433844
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000037694	BUD22	PF09073.10	7.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000034461	-	3214	XM_017708676	ENSPNAP00000037694	696 (aa)	XP_017564165	UPI0008142569

Gene Model

Click here to download ENSPNAG00000029666's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000029666's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000029666	srfbp1	91	52.985	ENSG00000151304	SRFBP1	71	52.985	Homo_sapiens
ENSPNAG00000029666	srfbp1	73	58.015	ENSAPOG00000021469	-	67	58.015	Acanthochromis_polyacanthus
ENSPNAG00000029666	srfbp1	60	53.097	ENSAMEG00000018050	SRFBP1	66	53.097	Ailuropoda_melanoleuca
ENSPNAG00000029666	srfbp1	68	58.779	ENSAOCG00000002182	-	66	59.231	Amphiprion_ocellaris
ENSPNAG00000029666	srfbp1	89	52.459	ENSACAG00000003779	SRFBP1	68	52.459	Anolis_carolinensis
ENSPNAG00000029666	srfbp1	80	80.000	ENSANAG00000022485	SRFBP1	63	80.000	Aotus_nancymaae
ENSPNAG00000029666	srfbp1	65	51.908	ENSBTAG00000014320	SRFBP1	70	51.908	Bos_taurus
ENSPNAG00000029666	srfbp1	91	53.731	ENSCJAG00000017177	SRFBP1	71	53.731	Callithrix_jacchus
ENSPNAG00000029666	srfbp1	90	56.693	ENSCAFG00000000512	SRFBP1	70	56.693	Canis_familiaris
ENSPNAG00000029666	srfbp1	90	56.693	ENSCAFG00020009389	SRFBP1	70	56.693	Canis_lupus_dingo
ENSPNAG00000029666	srfbp1	66	55.833	ENSTSYG00000008630	-	69	54.472	Carlito_syrichta
ENSPNAG00000029666	srfbp1	93	49.686	ENSCPOG00000004695	SRFBP1	74	52.055	Cavia_porcellus
ENSPNAG00000029666	srfbp1	91	53.731	ENSCATG00000040904	SRFBP1	71	53.731	Cercocebus_atys
ENSPNAG00000029666	srfbp1	69	49.275	ENSCLAG00000003630	SRFBP1	72	49.275	Chinchilla_lanigera
ENSPNAG00000029666	srfbp1	91	53.731	ENSCSAG00000014636	SRFBP1	100	53.731	Chlorocebus_sabaeus
ENSPNAG00000029666	srfbp1	65	52.985	ENSCANG00000041298	SRFBP1	71	52.985	Colobus_angolensis_palliatus
ENSPNAG00000029666	srfbp1	97	48.295	ENSCGRG00001000718	Srfbp1	69	55.970	Cricetulus_griseus_chok1gshd
ENSPNAG00000029666	srfbp1	93	47.799	ENSCGRG00000010837	Srfbp1	83	54.622	Cricetulus_griseus_crigri
ENSPNAG00000029666	srfbp1	69	57.931	ENSCSEG00000011789	-	85	57.639	Cynoglossus_semilaevis
ENSPNAG00000029666	srfbp1	72	47.458	ENSEASG00005012421	SRFBP1	70	54.962	Equus_asinus_asinus
ENSPNAG00000029666	srfbp1	72	47.458	ENSECAG00000015330	SRFBP1	70	54.962	Equus_caballus
ENSPNAG00000029666	srfbp1	64	51.493	ENSFCAG00000035118	SRFBP1	71	51.493	Felis_catus
ENSPNAG00000029666	srfbp1	65	46.610	ENSFALG00000007595	SRFBP1	70	46.610	Ficedula_albicollis
ENSPNAG00000029666	srfbp1	69	49.351	ENSGALG00000005316	SRFBP1	72	51.471	Gallus_gallus
ENSPNAG00000029666	srfbp1	62	51.786	ENSGAGG00000024915	SRFBP1	68	51.786	Gopherus_agassizii
ENSPNAG00000029666	srfbp1	91	52.985	ENSGGOG00000007725	SRFBP1	71	52.985	Gorilla_gorilla
ENSPNAG00000029666	srfbp1	65	56.716	ENSSTOG00000029184	SRFBP1	69	56.716	Ictidomys_tridecemlineatus
ENSPNAG00000029666	srfbp1	61	51.304	ENSJJAG00000013229	Srfbp1	69	51.304	Jaculus_jaculus
ENSPNAG00000029666	srfbp1	77	48.555	ENSLBEG00000013924	-	76	56.204	Labrus_bergylta
ENSPNAG00000029666	srfbp1	90	56.061	ENSLOCG00000008772	SRFBP1	70	53.383	Lepisosteus_oculatus
ENSPNAG00000029666	srfbp1	96	45.238	ENSLAFG00000015303	SRFBP1	98	52.672	Loxodonta_africana
ENSPNAG00000029666	srfbp1	91	53.731	ENSMFAG00000031263	SRFBP1	71	53.731	Macaca_fascicularis
ENSPNAG00000029666	srfbp1	91	53.731	ENSMMUG00000021009	SRFBP1	71	53.731	Macaca_mulatta
ENSPNAG00000029666	srfbp1	91	53.731	ENSMNEG00000040870	SRFBP1	71	53.731	Macaca_nemestrina
ENSPNAG00000029666	srfbp1	68	52.555	ENSMAUG00000009431	Srfbp1	70	52.555	Mesocricetus_auratus
ENSPNAG00000029666	srfbp1	97	45.198	ENSMOCG00000006206	Srfbp1	68	55.385	Microtus_ochrogaster
ENSPNAG00000029666	srfbp1	91	59.055	ENSMALG00000001812	-	90	60.656	Monopterus_albus
ENSPNAG00000029666	srfbp1	78	45.732	MGP_CAROLIEiJ_G0022271	Srfbp1	70	52.985	Mus_caroli
ENSPNAG00000029666	srfbp1	95	46.341	ENSMUSG00000024528	Srfbp1	69	53.731	Mus_musculus
ENSPNAG00000029666	srfbp1	96	46.951	MGP_PahariEiJ_G0019004	Srfbp1	69	53.731	Mus_pahari
ENSPNAG00000029666	srfbp1	95	46.341	MGP_SPRETEiJ_G0023184	Srfbp1	69	53.731	Mus_spretus
ENSPNAG00000029666	srfbp1	64	53.543	ENSNGAG00000013229	Srfbp1	69	53.543	Nannospalax_galili
ENSPNAG00000029666	srfbp1	70	61.111	ENSNBRG00000001146	-	72	60.870	Neolamprologus_brichardi
ENSPNAG00000029666	srfbp1	91	52.985	ENSNLEG00000011949	SRFBP1	71	52.985	Nomascus_leucogenys
ENSPNAG00000029666	srfbp1	75	45.122	ENSOANG00000010042	-	67	46.835	Ornithorhynchus_anatinus
ENSPNAG00000029666	srfbp1	64	55.224	ENSOCUG00000009556	SRFBP1	69	55.224	Oryctolagus_cuniculus
ENSPNAG00000029666	srfbp1	68	55.970	ENSORLG00015000238	-	81	55.970	Oryzias_latipes_hsok
ENSPNAG00000029666	srfbp1	91	53.731	ENSPPAG00000035848	SRFBP1	71	53.731	Pan_paniscus
ENSPNAG00000029666	srfbp1	64	52.672	ENSPPRG00000001695	SRFBP1	71	51.493	Panthera_pardus
ENSPNAG00000029666	srfbp1	91	53.731	ENSPTRG00000017172	SRFBP1	71	53.731	Pan_troglodytes
ENSPNAG00000029666	srfbp1	91	53.731	ENSPANG00000003799	SRFBP1	71	53.731	Papio_anubis
ENSPNAG00000029666	srfbp1	50	55.039	ENSPKIG00000024291	-	71	55.039	Paramormyrops_kingsleyae
ENSPNAG00000029666	srfbp1	70	46.711	ENSPSIG00000010650	SRFBP1	74	48.252	Pelodiscus_sinensis
ENSPNAG00000029666	srfbp1	95	47.904	ENSPCIG00000028532	SRFBP1	66	56.693	Phascolarctos_cinereus
ENSPNAG00000029666	srfbp1	69	60.150	ENSPREG00000017248	-	75	59.124	Poecilia_reticulata
ENSPNAG00000029666	srfbp1	90	55.906	ENSPPYG00000015714	SRFBP1	71	52.985	Pongo_abelii
ENSPNAG00000029666	srfbp1	64	53.731	ENSPCOG00000027331	SRFBP1	71	53.731	Propithecus_coquereli
ENSPNAG00000029666	srfbp1	74	60.870	ENSPNYG00000010355	-	72	60.870	Pundamilia_nyererei
ENSPNAG00000029666	srfbp1	90	55.385	ENSRNOG00000014808	Srfbp1	71	53.472	Rattus_norvegicus
ENSPNAG00000029666	srfbp1	60	48.413	ENSRBIG00000031064	SRFBP1	70	48.413	Rhinopithecus_bieti
ENSPNAG00000029666	srfbp1	91	53.731	ENSRROG00000026932	SRFBP1	71	53.731	Rhinopithecus_roxellana
ENSPNAG00000029666	srfbp1	80	80.645	ENSSBOG00000015464	-	63	80.645	Saimiri_boliviensis_boliviensis
ENSPNAG00000029666	srfbp1	74	57.480	ENSSHAG00000016003	SRFBP1	69	57.480	Sarcophilus_harrisii
ENSPNAG00000029666	srfbp1	91	59.712	ENSSDUG00000001828	-	87	59.712	Seriola_dumerili
ENSPNAG00000029666	srfbp1	70	52.482	ENSSARG00000010669	SRFBP1	73	52.482	Sorex_araneus
ENSPNAG00000029666	srfbp1	68	51.562	ENSSPUG00000009204	SRFBP1	69	51.562	Sphenodon_punctatus
ENSPNAG00000029666	srfbp1	95	63.934	ENSSPAG00000010728	-	86	64.463	Stegastes_partitus
ENSPNAG00000029666	srfbp1	90	56.452	ENSSSCG00000022656	SRFBP1	69	56.452	Sus_scrofa
ENSPNAG00000029666	srfbp1	73	62.205	ENSTNIG00000009267	-	70	62.205	Tetraodon_nigroviridis
ENSPNAG00000029666	srfbp1	87	55.357	ENSUAMG00000016707	SRFBP1	68	55.357	Ursus_americanus
ENSPNAG00000029666	srfbp1	66	54.622	ENSUMAG00000018340	SRFBP1	73	52.000	Ursus_maritimus
ENSPNAG00000029666	srfbp1	64	53.435	ENSVPAG00000005714	SRFBP1	71	53.435	Vicugna_pacos
ENSPNAG00000029666	srfbp1	90	56.589	ENSXETG00000004681	srfbp1	69	56.589	Xenopus_tropicalis
ENSPNAG00000029666	srfbp1	90	58.015	ENSXCOG00000003410	-	73	58.015	Xiphophorus_couchianus