EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000030007 (Gene tree)
Gene ID: 108430435
Gene Symbol: si:ch211-271b14.1
Alias: si:ch211-271b14.1|zgc:152816
Full Name: uncharacterized LOC108430435
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 27393 bases
Position: chrKV575373.1:1699730-1727122
Accession: 108430435
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000037909	RRM_5	PF13893.6	5.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000034824	-	4493	XM_017702917	ENSPNAP00000037909	944 (aa)	XP_017558406	UPI00081450F4

Gene Model

Click here to download ENSPNAG00000030007's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000030007's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000030007	si:ch211-271b14.1	54	59.016	ENSG00000015479	MATR3	97	33.898	Homo_sapiens
ENSPNAG00000030007	si:ch211-271b14.1	56	59.016	ENSCANG00000028224	-	51	59.016	Colobus_angolensis_palliatus
ENSPNAG00000030007	si:ch211-271b14.1	99	52.632	ENSELUG00000021651	si:ch211-271b14.1	79	52.632	Esox_lucius
ENSPNAG00000030007	si:ch211-271b14.1	62	67.308	ENSFALG00000003071	-	52	40.678	Ficedula_albicollis
ENSPNAG00000030007	si:ch211-271b14.1	69	51.899	ENSFDAG00000017675	-	54	51.899	Fukomys_damarensis
ENSPNAG00000030007	si:ch211-271b14.1	53	59.016	ENSHGLG00100006442	-	51	59.016	Heterocephalus_glaber_male
ENSPNAG00000030007	si:ch211-271b14.1	63	48.276	ENSLBEG00000018267	matr3l1.1	63	30.346	Labrus_bergylta
ENSPNAG00000030007	si:ch211-271b14.1	56	59.016	ENSMNEG00000042856	-	52	59.016	Macaca_nemestrina
ENSPNAG00000030007	si:ch211-271b14.1	56	59.016	ENSMLEG00000041178	-	56	59.016	Mandrillus_leucophaeus
ENSPNAG00000030007	si:ch211-271b14.1	53	66.667	ENSMICG00000012438	-	50	66.667	Microcebus_murinus
ENSPNAG00000030007	si:ch211-271b14.1	56	50.633	MGP_CAROLIEiJ_G0022108	Matr3	65	50.633	Mus_caroli
ENSPNAG00000030007	si:ch211-271b14.1	55	50.633	MGP_PahariEiJ_G0018842	Matr3	55	50.633	Mus_pahari
ENSPNAG00000030007	si:ch211-271b14.1	56	50.633	MGP_SPRETEiJ_G0023020	Matr3	65	50.633	Mus_spretus
ENSPNAG00000030007	si:ch211-271b14.1	56	59.016	ENSPANG00000012018	-	52	59.016	Papio_anubis