EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000030046 (Gene tree)
Gene ID: 108427035
Gene Symbol: rbm17
Alias: zgc:55840
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 15801 bases
Position: chrKV575333.1:1087957-1103757
Accession: 108427035
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000022638	RRM_1	PF00076.22	2.7e-05	1	1
ENSPNAP00000037943	RRM_1	PF00076.22	3e-05	1	1
ENSPNAP00000022638	G-patch	PF01585.23	9.3e-13	1	1
ENSPNAP00000037943	G-patch	PF01585.23	1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000034874	-	1832	XM_017696929	ENSPNAP00000037943	418 (aa)	XP_017552418	UPI0008144E32
ENSPNAT00000034872	-	1185	-	ENSPNAP00000022638	394 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000030046's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000030046's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000030046	rbm17	100	79.294	ENSG00000134453	RBM17	100	79.294	Homo_sapiens
ENSPNAG00000030046	rbm17	99	85.442	ENSAPOG00000007101	rbm17	99	84.010	Acanthochromis_polyacanthus
ENSPNAG00000030046	rbm17	100	79.765	ENSAMEG00000002107	RBM17	100	79.765	Ailuropoda_melanoleuca
ENSPNAG00000030046	rbm17	100	84.938	ENSACIG00000006251	rbm17	100	83.457	Amphilophus_citrinellus
ENSPNAG00000030046	rbm17	100	85.579	ENSAOCG00000014892	rbm17	100	84.161	Amphiprion_ocellaris
ENSPNAG00000030046	rbm17	100	85.579	ENSAPEG00000022779	rbm17	100	84.161	Amphiprion_percula
ENSPNAG00000030046	rbm17	100	84.634	ENSATEG00000004406	rbm17	100	84.397	Anabas_testudineus
ENSPNAG00000030046	rbm17	100	79.765	ENSAPLG00000004190	RBM17	100	79.765	Anas_platyrhynchos
ENSPNAG00000030046	rbm17	90	76.864	ENSACAG00000005418	RBM17	99	74.036	Anolis_carolinensis
ENSPNAG00000030046	rbm17	100	79.529	ENSANAG00000030127	RBM17	98	86.777	Aotus_nancymaae
ENSPNAG00000030046	rbm17	100	72.292	ENSANAG00000019330	-	97	84.746	Aotus_nancymaae
ENSPNAG00000030046	rbm17	100	82.620	ENSACLG00000003928	rbm17	100	82.620	Astatotilapia_calliptera
ENSPNAG00000030046	rbm17	100	95.215	ENSAMXG00000005853	rbm17	100	95.215	Astyanax_mexicanus
ENSPNAG00000030046	rbm17	100	79.059	ENSBTAG00000021951	RBM17	100	79.059	Bos_taurus
ENSPNAG00000030046	rbm17	100	78.118	ENSBTAG00000011094	-	100	78.118	Bos_taurus
ENSPNAG00000030046	rbm17	74	32.609	WBGene00010233	F58B3.7	58	37.387	Caenorhabditis_elegans
ENSPNAG00000030046	rbm17	100	79.899	ENSCJAG00000020573	RBM17	100	79.529	Callithrix_jacchus
ENSPNAG00000030046	rbm17	100	79.765	ENSCAFG00000005206	RBM17	100	79.765	Canis_familiaris
ENSPNAG00000030046	rbm17	100	81.612	ENSCAFG00020005420	RBM17	100	78.841	Canis_lupus_dingo
ENSPNAG00000030046	rbm17	100	76.941	ENSCHIG00000019921	-	100	76.941	Capra_hircus
ENSPNAG00000030046	rbm17	100	80.605	ENSCHIG00000023204	-	100	79.059	Capra_hircus
ENSPNAG00000030046	rbm17	100	79.294	ENSTSYG00000001165	RBM17	98	88.889	Carlito_syrichta
ENSPNAG00000030046	rbm17	90	70.055	ENSCAPG00000006275	RBM17	100	66.484	Cavia_aperea
ENSPNAG00000030046	rbm17	100	80.549	ENSCPOG00000005679	RBM17	100	76.847	Cavia_porcellus
ENSPNAG00000030046	rbm17	100	79.529	ENSCCAG00000018655	RBM17	98	86.777	Cebus_capucinus
ENSPNAG00000030046	rbm17	100	80.856	ENSCATG00000041566	RBM17	97	87.500	Cercocebus_atys
ENSPNAG00000030046	rbm17	100	80.000	ENSCLAG00000012195	RBM17	99	80.000	Chinchilla_lanigera
ENSPNAG00000030046	rbm17	100	79.294	ENSCSAG00000013564	RBM17	100	79.294	Chlorocebus_sabaeus
ENSPNAG00000030046	rbm17	93	61.675	ENSCHOG00000005131	RBM17	100	58.883	Choloepus_hoffmanni
ENSPNAG00000030046	rbm17	100	79.059	ENSCPBG00000019836	RBM17	100	79.059	Chrysemys_picta_bellii
ENSPNAG00000030046	rbm17	100	44.681	ENSCSAVG00000008782	-	100	42.317	Ciona_savignyi
ENSPNAG00000030046	rbm17	98	72.304	ENSCANG00000023715	-	99	72.304	Colobus_angolensis_palliatus
ENSPNAG00000030046	rbm17	100	79.059	ENSCANG00000030987	RBM17	97	87.500	Colobus_angolensis_palliatus
ENSPNAG00000030046	rbm17	100	64.179	ENSCGRG00001009256	-	61	65.471	Cricetulus_griseus_chok1gshd
ENSPNAG00000030046	rbm17	100	80.000	ENSCGRG00001013842	Rbm17	100	80.000	Cricetulus_griseus_chok1gshd
ENSPNAG00000030046	rbm17	100	80.000	ENSCGRG00000006907	Rbm17	100	80.000	Cricetulus_griseus_crigri
ENSPNAG00000030046	rbm17	100	83.491	ENSCSEG00000018164	rbm17	100	81.604	Cynoglossus_semilaevis
ENSPNAG00000030046	rbm17	100	82.323	ENSCVAG00000002476	rbm17	100	82.323	Cyprinodon_variegatus
ENSPNAG00000030046	rbm17	100	88.389	ENSDARG00000031346	rbm17	100	88.389	Danio_rerio
ENSPNAG00000030046	rbm17	100	79.765	ENSDNOG00000035920	RBM17	100	79.765	Dasypus_novemcinctus
ENSPNAG00000030046	rbm17	99	36.264	FBgn0086683	Spf45	65	44.715	Drosophila_melanogaster
ENSPNAG00000030046	rbm17	87	83.810	ENSETEG00000006642	RBM17	81	83.810	Echinops_telfairi
ENSPNAG00000030046	rbm17	63	66.667	ENSEBUG00000010253	rbm17	81	66.667	Eptatretus_burgeri
ENSPNAG00000030046	rbm17	93	76.396	ENSEASG00005009236	-	100	76.396	Equus_asinus_asinus
ENSPNAG00000030046	rbm17	100	80.100	ENSEASG00005019205	-	100	76.866	Equus_asinus_asinus
ENSPNAG00000030046	rbm17	100	70.617	ENSECAG00000001379	-	100	70.353	Equus_caballus
ENSPNAG00000030046	rbm17	100	71.285	ENSECAG00000008939	RBM17	100	71.033	Equus_caballus
ENSPNAG00000030046	rbm17	86	63.043	ENSEEUG00000013077	RBM17	100	60.054	Erinaceus_europaeus
ENSPNAG00000030046	rbm17	100	84.149	ENSELUG00000006440	rbm17	100	83.916	Esox_lucius
ENSPNAG00000030046	rbm17	100	79.765	ENSFCAG00000031988	RBM17	100	79.765	Felis_catus
ENSPNAG00000030046	rbm17	100	79.765	ENSFALG00000001790	RBM17	100	79.765	Ficedula_albicollis
ENSPNAG00000030046	rbm17	100	80.000	ENSFDAG00000007470	RBM17	100	80.000	Fukomys_damarensis
ENSPNAG00000030046	rbm17	100	84.925	ENSFHEG00000001266	rbm17	100	83.488	Fundulus_heteroclitus
ENSPNAG00000030046	rbm17	99	78.759	ENSGMOG00000008438	rbm17	100	78.043	Gadus_morhua
ENSPNAG00000030046	rbm17	100	79.294	ENSGALG00000006332	RBM17	100	79.294	Gallus_gallus
ENSPNAG00000030046	rbm17	100	83.920	ENSGAFG00000019879	rbm17	100	82.742	Gambusia_affinis
ENSPNAG00000030046	rbm17	99	82.185	ENSGACG00000019174	rbm17	99	81.948	Gasterosteus_aculeatus
ENSPNAG00000030046	rbm17	100	79.059	ENSGAGG00000019906	RBM17	100	79.059	Gopherus_agassizii
ENSPNAG00000030046	rbm17	100	85.545	ENSHBUG00000016624	rbm17	100	84.123	Haplochromis_burtoni
ENSPNAG00000030046	rbm17	100	80.000	ENSHGLG00000011580	RBM17	100	80.000	Heterocephalus_glaber_female
ENSPNAG00000030046	rbm17	100	80.000	ENSHGLG00100010460	RBM17	100	80.000	Heterocephalus_glaber_male
ENSPNAG00000030046	rbm17	99	81.473	ENSHCOG00000010865	rbm17	100	80.760	Hippocampus_comes
ENSPNAG00000030046	rbm17	100	90.758	ENSIPUG00000007699	Rbm17	100	90.758	Ictalurus_punctatus
ENSPNAG00000030046	rbm17	100	80.000	ENSSTOG00000013591	RBM17	100	80.000	Ictidomys_tridecemlineatus
ENSPNAG00000030046	rbm17	100	58.588	ENSJJAG00000000993	-	100	56.235	Jaculus_jaculus
ENSPNAG00000030046	rbm17	100	80.000	ENSJJAG00000022886	Rbm17	100	80.000	Jaculus_jaculus
ENSPNAG00000030046	rbm17	100	82.620	ENSKMAG00000021400	rbm17	100	82.701	Kryptolebias_marmoratus
ENSPNAG00000030046	rbm17	100	84.634	ENSLBEG00000000881	rbm17	100	84.397	Labrus_bergylta
ENSPNAG00000030046	rbm17	99	67.133	ENSLACG00000017297	RBM17	99	62.588	Latimeria_chalumnae
ENSPNAG00000030046	rbm17	100	83.568	ENSLOCG00000015659	rbm17	100	83.568	Lepisosteus_oculatus
ENSPNAG00000030046	rbm17	100	79.765	ENSLAFG00000011629	RBM17	100	79.765	Loxodonta_africana
ENSPNAG00000030046	rbm17	100	80.856	ENSMFAG00000035521	RBM17	97	87.500	Macaca_fascicularis
ENSPNAG00000030046	rbm17	100	79.294	ENSMMUG00000015152	RBM17	97	87.500	Macaca_mulatta
ENSPNAG00000030046	rbm17	100	80.856	ENSMNEG00000017264	RBM17	97	87.500	Macaca_nemestrina
ENSPNAG00000030046	rbm17	100	80.856	ENSMLEG00000029340	RBM17	97	87.500	Mandrillus_leucophaeus
ENSPNAG00000030046	rbm17	100	83.924	ENSMAMG00000000387	rbm17	100	84.397	Mastacembelus_armatus
ENSPNAG00000030046	rbm17	100	85.545	ENSMZEG00005015179	rbm17	100	84.123	Maylandia_zebra
ENSPNAG00000030046	rbm17	100	79.157	ENSMGAG00000003981	RBM17	100	79.157	Meleagris_gallopavo
ENSPNAG00000030046	rbm17	100	80.000	ENSMAUG00000019247	Rbm17	100	80.000	Mesocricetus_auratus
ENSPNAG00000030046	rbm17	100	79.765	ENSMICG00000003976	-	100	79.765	Microcebus_murinus
ENSPNAG00000030046	rbm17	100	74.178	ENSMICG00000041489	-	100	71.596	Microcebus_murinus
ENSPNAG00000030046	rbm17	92	66.038	ENSMOCG00000014517	-	99	66.577	Microtus_ochrogaster
ENSPNAG00000030046	rbm17	100	80.000	ENSMOCG00000011847	Rbm17	100	80.000	Microtus_ochrogaster
ENSPNAG00000030046	rbm17	100	79.657	ENSMMOG00000010264	rbm17	100	75.980	Mola_mola
ENSPNAG00000030046	rbm17	100	79.765	ENSMODG00000016648	RBM17	100	79.765	Monodelphis_domestica
ENSPNAG00000030046	rbm17	100	84.434	ENSMALG00000010597	rbm17	100	84.434	Monopterus_albus
ENSPNAG00000030046	rbm17	100	79.765	MGP_CAROLIEiJ_G0023173	Rbm17	100	79.765	Mus_caroli
ENSPNAG00000030046	rbm17	100	79.765	ENSMUSG00000037197	Rbm17	100	79.765	Mus_musculus
ENSPNAG00000030046	rbm17	100	79.765	MGP_PahariEiJ_G0019233	Rbm17	100	79.765	Mus_pahari
ENSPNAG00000030046	rbm17	100	79.765	MGP_SPRETEiJ_G0024091	Rbm17	100	79.765	Mus_spretus
ENSPNAG00000030046	rbm17	86	77.717	ENSMPUG00000016359	RBM17	96	77.717	Mustela_putorius_furo
ENSPNAG00000030046	rbm17	100	78.169	ENSMLUG00000002302	-	100	78.169	Myotis_lucifugus
ENSPNAG00000030046	rbm17	100	75.587	ENSMLUG00000025709	-	100	75.186	Myotis_lucifugus
ENSPNAG00000030046	rbm17	100	80.000	ENSNGAG00000000741	Rbm17	100	80.000	Nannospalax_galili
ENSPNAG00000030046	rbm17	100	57.431	ENSNGAG00000000663	-	95	76.404	Nannospalax_galili
ENSPNAG00000030046	rbm17	100	80.856	ENSNBRG00000018148	rbm17	100	80.856	Neolamprologus_brichardi
ENSPNAG00000030046	rbm17	100	80.000	ENSNLEG00000033350	RBM17	98	86.777	Nomascus_leucogenys
ENSPNAG00000030046	rbm17	100	74.824	ENSMEUG00000011347	RBM17	100	74.824	Notamacropus_eugenii
ENSPNAG00000030046	rbm17	100	79.812	ENSODEG00000004393	RBM17	100	79.812	Octodon_degus
ENSPNAG00000030046	rbm17	97	62.654	ENSODEG00000007286	-	99	62.654	Octodon_degus
ENSPNAG00000030046	rbm17	100	85.782	ENSONIG00000011838	rbm17	100	84.360	Oreochromis_niloticus
ENSPNAG00000030046	rbm17	100	78.824	ENSOANG00000015455	RBM17	100	79.529	Ornithorhynchus_anatinus
ENSPNAG00000030046	rbm17	100	83.688	ENSORLG00000028798	rbm17	100	81.797	Oryzias_latipes
ENSPNAG00000030046	rbm17	100	83.688	ENSORLG00020004593	rbm17	100	80.605	Oryzias_latipes_hni
ENSPNAG00000030046	rbm17	100	83.924	ENSORLG00015000033	rbm17	99	82.033	Oryzias_latipes_hsok
ENSPNAG00000030046	rbm17	100	83.924	ENSOMEG00000012060	rbm17	100	89.937	Oryzias_melastigma
ENSPNAG00000030046	rbm17	100	80.000	ENSOGAG00000015687	RBM17	100	80.000	Otolemur_garnettii
ENSPNAG00000030046	rbm17	100	79.059	ENSOARG00000012975	RBM17	100	79.059	Ovis_aries
ENSPNAG00000030046	rbm17	100	79.294	ENSPPAG00000032347	RBM17	98	86.777	Pan_paniscus
ENSPNAG00000030046	rbm17	100	79.765	ENSPPRG00000010706	RBM17	100	79.765	Panthera_pardus
ENSPNAG00000030046	rbm17	100	79.765	ENSPTIG00000007596	RBM17	100	79.765	Panthera_tigris_altaica
ENSPNAG00000030046	rbm17	100	79.294	ENSPTRG00000002265	RBM17	98	86.777	Pan_troglodytes
ENSPNAG00000030046	rbm17	100	80.856	ENSPANG00000023425	RBM17	97	87.500	Papio_anubis
ENSPNAG00000030046	rbm17	100	81.910	ENSPKIG00000005048	-	100	81.910	Paramormyrops_kingsleyae
ENSPNAG00000030046	rbm17	100	82.864	ENSPKIG00000025526	rbm17	100	82.864	Paramormyrops_kingsleyae
ENSPNAG00000030046	rbm17	100	78.271	ENSPSIG00000012332	RBM17	100	78.271	Pelodiscus_sinensis
ENSPNAG00000030046	rbm17	100	78.908	ENSPMGG00000007980	rbm17	100	79.156	Periophthalmus_magnuspinnatus
ENSPNAG00000030046	rbm17	100	80.000	ENSPEMG00000014320	Rbm17	100	80.000	Peromyscus_maniculatus_bairdii
ENSPNAG00000030046	rbm17	100	79.391	ENSPCIG00000019260	-	100	76.815	Phascolarctos_cinereus
ENSPNAG00000030046	rbm17	100	85.106	ENSPFOG00000013271	rbm17	100	85.106	Poecilia_formosa
ENSPNAG00000030046	rbm17	100	85.343	ENSPLAG00000004455	rbm17	100	85.343	Poecilia_latipinna
ENSPNAG00000030046	rbm17	100	85.106	ENSPMEG00000014864	rbm17	100	85.106	Poecilia_mexicana
ENSPNAG00000030046	rbm17	100	85.273	ENSPREG00000015589	rbm17	100	85.273	Poecilia_reticulata
ENSPNAG00000030046	rbm17	81	55.620	ENSPPYG00000019042	-	100	55.620	Pongo_abelii
ENSPNAG00000030046	rbm17	100	79.294	ENSPPYG00000002067	RBM17	100	79.294	Pongo_abelii
ENSPNAG00000030046	rbm17	99	58.865	ENSPPYG00000019881	-	100	58.865	Pongo_abelii
ENSPNAG00000030046	rbm17	100	72.235	ENSPCAG00000016879	RBM17	100	72.235	Procavia_capensis
ENSPNAG00000030046	rbm17	100	80.402	ENSPCOG00000027881	RBM17	100	79.529	Propithecus_coquereli
ENSPNAG00000030046	rbm17	100	71.529	ENSPVAG00000015499	RBM17	100	70.574	Pteropus_vampyrus
ENSPNAG00000030046	rbm17	100	78.338	ENSPNYG00000015274	rbm17	100	71.868	Pundamilia_nyererei
ENSPNAG00000030046	rbm17	100	80.000	ENSRNOG00000018767	Rbm17	100	80.000	Rattus_norvegicus
ENSPNAG00000030046	rbm17	100	80.000	ENSRBIG00000043727	RBM17	97	87.500	Rhinopithecus_bieti
ENSPNAG00000030046	rbm17	100	80.856	ENSRROG00000044142	RBM17	97	87.500	Rhinopithecus_roxellana
ENSPNAG00000030046	rbm17	100	70.588	ENSSBOG00000023653	-	100	64.941	Saimiri_boliviensis_boliviensis
ENSPNAG00000030046	rbm17	100	79.294	ENSSBOG00000031661	-	93	88.696	Saimiri_boliviensis_boliviensis
ENSPNAG00000030046	rbm17	100	80.000	ENSSHAG00000012480	-	100	80.000	Sarcophilus_harrisii
ENSPNAG00000030046	rbm17	100	83.803	ENSSFOG00015009892	rbm17	100	83.803	Scleropages_formosus
ENSPNAG00000030046	rbm17	100	81.567	ENSSMAG00000012368	rbm17	100	79.724	Scophthalmus_maximus
ENSPNAG00000030046	rbm17	100	85.354	ENSSDUG00000015015	rbm17	100	84.455	Seriola_dumerili
ENSPNAG00000030046	rbm17	100	85.354	ENSSLDG00000014486	rbm17	100	84.455	Seriola_lalandi_dorsalis
ENSPNAG00000030046	rbm17	50	79.817	ENSSARG00000001792	-	79	79.817	Sorex_araneus
ENSPNAG00000030046	rbm17	99	79.009	ENSSPUG00000001036	RBM17	99	79.009	Sphenodon_punctatus
ENSPNAG00000030046	rbm17	100	85.106	ENSSPAG00000002338	rbm17	100	83.688	Stegastes_partitus
ENSPNAG00000030046	rbm17	100	78.824	ENSSSCG00000011134	RBM17	100	78.824	Sus_scrofa
ENSPNAG00000030046	rbm17	100	80.235	ENSTGUG00000002013	RBM17	100	80.235	Taeniopygia_guttata
ENSPNAG00000030046	rbm17	100	82.506	ENSTRUG00000010698	rbm17	100	82.270	Takifugu_rubripes
ENSPNAG00000030046	rbm17	100	82.979	ENSTNIG00000006892	rbm17	100	82.742	Tetraodon_nigroviridis
ENSPNAG00000030046	rbm17	100	62.129	ENSTBEG00000014686	RBM17	100	62.129	Tupaia_belangeri
ENSPNAG00000030046	rbm17	90	77.604	ENSTTRG00000001344	RBM17	100	74.740	Tursiops_truncatus
ENSPNAG00000030046	rbm17	100	81.612	ENSUAMG00000009499	RBM17	100	78.841	Ursus_americanus
ENSPNAG00000030046	rbm17	100	81.360	ENSUMAG00000012237	RBM17	100	79.765	Ursus_maritimus
ENSPNAG00000030046	rbm17	100	69.327	ENSVPAG00000005497	RBM17	81	86.726	Vicugna_pacos
ENSPNAG00000030046	rbm17	100	81.612	ENSVVUG00000006780	RBM17	100	78.841	Vulpes_vulpes
ENSPNAG00000030046	rbm17	99	76.066	ENSXETG00000018123	rbm17	100	76.066	Xenopus_tropicalis
ENSPNAG00000030046	rbm17	100	84.323	ENSXMAG00000008674	rbm17	100	84.323	Xiphophorus_maculatus