EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000000204 (Gene tree)
Gene ID: 102213413
Gene Symbol: hnrnph1
Alias: zgc:77712
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 8897 bases
Position: chrJH419206.1:7946218-7955114
Accession: 102213413
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000000270	zf-RNPHF	PF08080.12	1e-11	1	1
ENSPNYP00000000269	zf-RNPHF	PF08080.12	8e-09	1	1
ENSPNYP00000000270	RRM_1	PF00076.22	1.8e-33	1	3
ENSPNYP00000000270	RRM_1	PF00076.22	1.8e-33	2	3
ENSPNYP00000000270	RRM_1	PF00076.22	1.8e-33	3	3
ENSPNYP00000000269	RRM_1	PF00076.22	2.8e-33	1	3
ENSPNYP00000000269	RRM_1	PF00076.22	2.8e-33	2	3
ENSPNYP00000000269	RRM_1	PF00076.22	2.8e-33	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000000278	-	1110	-	ENSPNYP00000000270	369 (aa)	-	-
ENSPNYT00000000277	-	4629	XM_013908373	ENSPNYP00000000269	406 (aa)	XP_013763827	UPI0003EBE93E

Gene Model

Click here to download ENSPNYG00000000204's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000000204's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000000204	hnrnph1	94	60.160	ENSPNYG00000016363	hnrnph3	97	59.288
ENSPNYG00000000204	hnrnph1	94	42.571	ENSPNYG00000005379	grsf1	78	44.713

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000000204	hnrnph1	100	97.789	ENSAPOG00000016614	hnrnph1	100	97.789	Acanthochromis_polyacanthus
ENSPNYG00000000204	hnrnph1	99	98.936	ENSACIG00000008964	hnrnph1	98	98.936	Amphilophus_citrinellus
ENSPNYG00000000204	hnrnph1	100	98.280	ENSAOCG00000008372	hnrnph1	100	98.280	Amphiprion_ocellaris
ENSPNYG00000000204	hnrnph1	100	98.034	ENSAPEG00000012980	hnrnph1	100	98.034	Amphiprion_percula
ENSPNYG00000000204	hnrnph1	100	98.526	ENSATEG00000002792	hnrnph1	100	98.526	Anabas_testudineus
ENSPNYG00000000204	hnrnph1	97	83.424	ENSACAG00000016323	-	91	75.779	Anolis_carolinensis
ENSPNYG00000000204	hnrnph1	99	100.000	ENSACLG00000003313	hnrnph1	98	100.000	Astatotilapia_calliptera
ENSPNYG00000000204	hnrnph1	99	83.047	ENSAMXG00000030703	hnrnph1l	84	82.555	Astyanax_mexicanus
ENSPNYG00000000204	hnrnph1	100	84.223	ENSAMXG00000002483	hnrnph1	99	89.182	Astyanax_mexicanus
ENSPNYG00000000204	hnrnph1	100	93.888	ENSCSEG00000015891	hnrnph1	100	95.110	Cynoglossus_semilaevis
ENSPNYG00000000204	hnrnph1	100	96.305	ENSCVAG00000014097	hnrnph1	100	96.305	Cyprinodon_variegatus
ENSPNYG00000000204	hnrnph1	95	88.432	ENSDARG00000005551	hnrnph1l	99	85.995	Danio_rerio
ENSPNYG00000000204	hnrnph1	93	88.158	ENSDARG00000040881	hnrnph1	94	88.684	Danio_rerio
ENSPNYG00000000204	hnrnph1	98	89.167	ENSELUG00000006715	hnrnph1	97	90.000	Esox_lucius
ENSPNYG00000000204	hnrnph1	96	84.474	ENSELUG00000021437	-	99	87.105	Esox_lucius
ENSPNYG00000000204	hnrnph1	100	94.335	ENSFHEG00000008474	hnrnph1	100	93.103	Fundulus_heteroclitus
ENSPNYG00000000204	hnrnph1	99	85.946	ENSGMOG00000006782	hnrnph1	97	88.804	Gadus_morhua
ENSPNYG00000000204	hnrnph1	100	98.030	ENSGAFG00000006280	hnrnph1	100	98.030	Gambusia_affinis
ENSPNYG00000000204	hnrnph1	100	91.400	ENSGACG00000018352	hnrnph1	99	90.049	Gasterosteus_aculeatus
ENSPNYG00000000204	hnrnph1	100	100.000	ENSHBUG00000010547	hnrnph1	100	100.000	Haplochromis_burtoni
ENSPNYG00000000204	hnrnph1	97	90.652	ENSHCOG00000004513	hnrnph1	100	88.361	Hippocampus_comes
ENSPNYG00000000204	hnrnph1	100	83.010	ENSIPUG00000018262	hnrnph1	100	85.194	Ictalurus_punctatus
ENSPNYG00000000204	hnrnph1	96	84.181	ENSIPUG00000024047	hnrnph1l	96	81.327	Ictalurus_punctatus
ENSPNYG00000000204	hnrnph1	100	96.088	ENSKMAG00000018802	hnrnph1	100	96.088	Kryptolebias_marmoratus
ENSPNYG00000000204	hnrnph1	100	97.052	ENSLBEG00000027811	hnrnph1	100	97.052	Labrus_bergylta
ENSPNYG00000000204	hnrnph1	98	85.067	ENSLOCG00000012510	hnrnph1	91	82.134	Lepisosteus_oculatus
ENSPNYG00000000204	hnrnph1	98	57.576	ENSMMUG00000017392	-	86	55.319	Macaca_mulatta
ENSPNYG00000000204	hnrnph1	98	57.576	ENSMNEG00000030544	-	86	55.319	Macaca_nemestrina
ENSPNYG00000000204	hnrnph1	99	93.989	ENSMAMG00000011478	hnrnph1	98	93.989	Mastacembelus_armatus
ENSPNYG00000000204	hnrnph1	100	100.000	ENSMZEG00005009791	hnrnph1	100	100.000	Maylandia_zebra
ENSPNYG00000000204	hnrnph1	93	94.737	ENSMMOG00000009064	hnrnph1	98	94.474	Mola_mola
ENSPNYG00000000204	hnrnph1	78	53.488	ENSMODG00000002200	-	99	51.952	Monodelphis_domestica
ENSPNYG00000000204	hnrnph1	98	95.238	ENSMALG00000003999	hnrnph1	99	95.238	Monopterus_albus
ENSPNYG00000000204	hnrnph1	100	99.729	ENSNBRG00000015406	hnrnph1	100	99.729	Neolamprologus_brichardi
ENSPNYG00000000204	hnrnph1	100	99.754	ENSONIG00000017754	hnrnph1	100	99.754	Oreochromis_niloticus
ENSPNYG00000000204	hnrnph1	100	95.884	ENSORLG00000006932	hnrnph1	100	95.884	Oryzias_latipes
ENSPNYG00000000204	hnrnph1	100	95.884	ENSORLG00020007881	hnrnph1	100	95.884	Oryzias_latipes_hni
ENSPNYG00000000204	hnrnph1	100	95.884	ENSORLG00015005306	hnrnph1	100	95.884	Oryzias_latipes_hsok
ENSPNYG00000000204	hnrnph1	100	97.794	ENSOMEG00000009827	hnrnph1	100	97.794	Oryzias_melastigma
ENSPNYG00000000204	hnrnph1	100	88.020	ENSPKIG00000018203	hnrnph1l	100	86.308	Paramormyrops_kingsleyae
ENSPNYG00000000204	hnrnph1	98	83.836	ENSPKIG00000009532	-	93	81.095	Paramormyrops_kingsleyae
ENSPNYG00000000204	hnrnph1	100	92.629	ENSPMGG00000012151	hnrnph1	100	93.612	Periophthalmus_magnuspinnatus
ENSPNYG00000000204	hnrnph1	100	98.522	ENSPFOG00000004097	hnrnph1	100	98.522	Poecilia_formosa
ENSPNYG00000000204	hnrnph1	100	98.522	ENSPLAG00000011771	hnrnph1	100	98.522	Poecilia_latipinna
ENSPNYG00000000204	hnrnph1	100	98.276	ENSPMEG00000019446	hnrnph1	100	98.276	Poecilia_mexicana
ENSPNYG00000000204	hnrnph1	100	98.276	ENSPREG00000005780	hnrnph1	100	98.276	Poecilia_reticulata
ENSPNYG00000000204	hnrnph1	99	84.352	ENSPNAG00000002784	hnrnph1l	99	83.292	Pygocentrus_nattereri
ENSPNYG00000000204	hnrnph1	98	87.855	ENSPNAG00000000439	hnrnph1	100	85.922	Pygocentrus_nattereri
ENSPNYG00000000204	hnrnph1	97	90.657	ENSSFOG00015022796	hnrnph1l	100	88.078	Scleropages_formosus
ENSPNYG00000000204	hnrnph1	98	86.301	ENSSFOG00015016055	-	94	89.501	Scleropages_formosus
ENSPNYG00000000204	hnrnph1	98	92.758	ENSSMAG00000007820	hnrnph1	96	93.701	Scophthalmus_maximus
ENSPNYG00000000204	hnrnph1	100	98.280	ENSSDUG00000008785	hnrnph1	100	98.280	Seriola_dumerili
ENSPNYG00000000204	hnrnph1	100	98.280	ENSSLDG00000010685	hnrnph1	100	98.280	Seriola_lalandi_dorsalis
ENSPNYG00000000204	hnrnph1	100	97.543	ENSSPAG00000009921	hnrnph1	100	97.543	Stegastes_partitus
ENSPNYG00000000204	hnrnph1	100	95.813	ENSTRUG00000020069	hnrnph1	100	95.813	Takifugu_rubripes
ENSPNYG00000000204	hnrnph1	97	81.471	ENSXETG00000018321	hnrnph1	83	83.471	Xenopus_tropicalis
ENSPNYG00000000204	hnrnph1	98	95.493	ENSXCOG00000009133	hnrnph1	97	94.373	Xiphophorus_couchianus
ENSPNYG00000000204	hnrnph1	98	94.648	ENSXMAG00000021332	hnrnph1	99	98.138	Xiphophorus_maculatus