EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000000251 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.3
Alias: -
Full Name: uncharacterized LOC102211808
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 3566 bases
Position: chrJH419206.1:9486901-9490466
Accession: 102211808
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000000331	Sua5_yciO_yrdC	PF01300.18	2.2e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000000339	-	2631	XM_005719747	ENSPNYP00000000331	877 (aa)	XP_005719804	-

Gene Model

Click here to download ENSPNYG00000000251's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000000251's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000000251	si:ch211-153b23.3	59	33.581	ENSPNYG00000000250	si:ch211-153b23.4	63	33.272

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000000251	si:ch211-153b23.3	58	31.407	ENSAPOG00000006178	si:ch211-153b23.4	59	31.407	Acanthochromis_polyacanthus
ENSPNYG00000000251	si:ch211-153b23.3	58	31.407	ENSAPOG00000006144	si:ch211-153b23.4	60	31.407	Acanthochromis_polyacanthus
ENSPNYG00000000251	si:ch211-153b23.3	100	73.182	ENSACIG00000006968	si:ch211-153b23.3	100	73.068	Amphilophus_citrinellus
ENSPNYG00000000251	si:ch211-153b23.3	100	82.139	ENSAOCG00000010974	si:ch211-153b23.3	100	82.139	Amphiprion_ocellaris
ENSPNYG00000000251	si:ch211-153b23.3	56	31.412	ENSAOCG00000010999	si:ch211-153b23.4	61	31.412	Amphiprion_ocellaris
ENSPNYG00000000251	si:ch211-153b23.3	100	82.366	ENSAPEG00000014700	si:ch211-153b23.3	100	82.366	Amphiprion_percula
ENSPNYG00000000251	si:ch211-153b23.3	56	31.890	ENSAPEG00000014665	si:ch211-153b23.4	60	31.890	Amphiprion_percula
ENSPNYG00000000251	si:ch211-153b23.3	100	80.861	ENSATEG00000004956	si:ch211-153b23.3	99	80.861	Anabas_testudineus
ENSPNYG00000000251	si:ch211-153b23.3	57	32.122	ENSATEG00000004948	si:ch211-153b23.4	59	32.122	Anabas_testudineus
ENSPNYG00000000251	si:ch211-153b23.3	59	33.766	ENSACLG00000005471	si:ch211-153b23.4	58	33.766	Astatotilapia_calliptera
ENSPNYG00000000251	si:ch211-153b23.3	100	99.430	ENSACLG00000005894	si:ch211-153b23.3	100	99.430	Astatotilapia_calliptera
ENSPNYG00000000251	si:ch211-153b23.3	100	70.615	ENSAMXG00000038564	si:ch211-153b23.3	99	70.615	Astyanax_mexicanus
ENSPNYG00000000251	si:ch211-153b23.3	59	32.576	ENSAMXG00000013879	si:ch211-153b23.4	61	32.576	Astyanax_mexicanus
ENSPNYG00000000251	si:ch211-153b23.3	99	77.072	ENSCSEG00000014853	si:ch211-153b23.3	100	77.072	Cynoglossus_semilaevis
ENSPNYG00000000251	si:ch211-153b23.3	57	33.143	ENSCVAG00000021145	si:ch211-153b23.4	64	33.333	Cyprinodon_variegatus
ENSPNYG00000000251	si:ch211-153b23.3	100	79.682	ENSCVAG00000021124	si:ch211-153b23.3	100	79.682	Cyprinodon_variegatus
ENSPNYG00000000251	si:ch211-153b23.3	59	33.771	ENSDARG00000077169	si:ch211-153b23.4	59	33.585	Danio_rerio
ENSPNYG00000000251	si:ch211-153b23.3	100	70.707	ENSDARG00000104919	si:ch211-153b23.3	99	70.819	Danio_rerio
ENSPNYG00000000251	si:ch211-153b23.3	80	88.073	ENSELUG00000004912	si:ch211-153b23.3	99	88.073	Esox_lucius
ENSPNYG00000000251	si:ch211-153b23.3	57	32.190	ENSFALG00000011343	-	59	32.190	Ficedula_albicollis
ENSPNYG00000000251	si:ch211-153b23.3	100	80.726	ENSFHEG00000010030	si:ch211-153b23.3	99	80.726	Fundulus_heteroclitus
ENSPNYG00000000251	si:ch211-153b23.3	71	30.455	ENSFHEG00000010001	si:ch211-153b23.4	77	30.612	Fundulus_heteroclitus
ENSPNYG00000000251	si:ch211-153b23.3	100	79.909	ENSGAFG00000007455	si:ch211-153b23.3	99	79.909	Gambusia_affinis
ENSPNYG00000000251	si:ch211-153b23.3	59	32.514	ENSGACG00000018253	si:ch211-153b23.4	60	32.514	Gasterosteus_aculeatus
ENSPNYG00000000251	si:ch211-153b23.3	56	32.821	ENSHBUG00000000013	si:ch211-153b23.4	65	32.821	Haplochromis_burtoni
ENSPNYG00000000251	si:ch211-153b23.3	100	99.772	ENSHBUG00000001760	si:ch211-153b23.3	100	99.772	Haplochromis_burtoni
ENSPNYG00000000251	si:ch211-153b23.3	100	70.408	ENSIPUG00000015213	si:ch211-153b23.3	99	70.408	Ictalurus_punctatus
ENSPNYG00000000251	si:ch211-153b23.3	58	33.333	ENSKMAG00000006829	si:ch211-153b23.4	63	33.270	Kryptolebias_marmoratus
ENSPNYG00000000251	si:ch211-153b23.3	99	79.205	ENSKMAG00000006792	si:ch211-153b23.3	99	79.205	Kryptolebias_marmoratus
ENSPNYG00000000251	si:ch211-153b23.3	59	33.208	ENSKMAG00000006919	-	59	33.208	Kryptolebias_marmoratus
ENSPNYG00000000251	si:ch211-153b23.3	100	80.568	ENSLBEG00000026324	si:ch211-153b23.3	99	80.568	Labrus_bergylta
ENSPNYG00000000251	si:ch211-153b23.3	94	57.500	ENSLACG00000005800	-	99	57.143	Latimeria_chalumnae
ENSPNYG00000000251	si:ch211-153b23.3	84	62.500	ENSLOCG00000015063	si:ch211-153b23.3	98	62.500	Lepisosteus_oculatus
ENSPNYG00000000251	si:ch211-153b23.3	100	79.841	ENSMAMG00000009328	si:ch211-153b23.3	100	79.841	Mastacembelus_armatus
ENSPNYG00000000251	si:ch211-153b23.3	59	32.319	ENSMAMG00000009358	si:ch211-153b23.4	63	32.319	Mastacembelus_armatus
ENSPNYG00000000251	si:ch211-153b23.3	59	32.576	ENSMAMG00000009277	si:ch211-153b23.4	62	32.576	Mastacembelus_armatus
ENSPNYG00000000251	si:ch211-153b23.3	59	33.581	ENSMZEG00005011433	si:ch211-153b23.4	63	33.272	Maylandia_zebra
ENSPNYG00000000251	si:ch211-153b23.3	100	99.202	ENSMZEG00005011450	si:ch211-153b23.3	100	99.202	Maylandia_zebra
ENSPNYG00000000251	si:ch211-153b23.3	100	79.954	ENSMMOG00000004436	si:ch211-153b23.3	99	79.954	Mola_mola
ENSPNYG00000000251	si:ch211-153b23.3	59	33.088	ENSNBRG00000013392	si:ch211-153b23.4	65	33.088	Neolamprologus_brichardi
ENSPNYG00000000251	si:ch211-153b23.3	100	99.088	ENSNBRG00000013370	si:ch211-153b23.3	100	99.088	Neolamprologus_brichardi
ENSPNYG00000000251	si:ch211-153b23.3	59	33.581	ENSONIG00000017875	si:ch211-153b23.4	59	33.581	Oreochromis_niloticus
ENSPNYG00000000251	si:ch211-153b23.3	100	77.903	ENSORLG00000006161	si:ch211-153b23.3	99	77.903	Oryzias_latipes
ENSPNYG00000000251	si:ch211-153b23.3	97	78.923	ENSORLG00020000910	si:ch211-153b23.3	100	78.923	Oryzias_latipes_hni
ENSPNYG00000000251	si:ch211-153b23.3	97	78.037	ENSORLG00015003698	si:ch211-153b23.3	100	78.037	Oryzias_latipes_hsok
ENSPNYG00000000251	si:ch211-153b23.3	100	78.555	ENSOMEG00000007661	si:ch211-153b23.3	99	78.668	Oryzias_melastigma
ENSPNYG00000000251	si:ch211-153b23.3	99	50.165	ENSPKIG00000021029	-	99	50.276	Paramormyrops_kingsleyae
ENSPNYG00000000251	si:ch211-153b23.3	97	71.445	ENSPKIG00000022450	si:ch211-153b23.3	100	71.445	Paramormyrops_kingsleyae
ENSPNYG00000000251	si:ch211-153b23.3	82	77.551	ENSPMGG00000001311	si:ch211-153b23.3	99	77.551	Periophthalmus_magnuspinnatus
ENSPNYG00000000251	si:ch211-153b23.3	100	80.090	ENSPFOG00000012289	si:ch211-153b23.3	99	79.842	Poecilia_formosa
ENSPNYG00000000251	si:ch211-153b23.3	99	80.795	ENSPLAG00000016320	si:ch211-153b23.3	100	80.795	Poecilia_latipinna
ENSPNYG00000000251	si:ch211-153b23.3	100	81.066	ENSPMEG00000008884	si:ch211-153b23.3	99	80.817	Poecilia_mexicana
ENSPNYG00000000251	si:ch211-153b23.3	58	32.700	ENSPMEG00000007538	si:ch211-153b23.4	63	32.700	Poecilia_mexicana
ENSPNYG00000000251	si:ch211-153b23.3	100	71.542	ENSPNAG00000019592	si:ch211-153b23.3	99	71.542	Pygocentrus_nattereri
ENSPNYG00000000251	si:ch211-153b23.3	68	49.839	ENSSFOG00015009030	-	96	49.839	Scleropages_formosus
ENSPNYG00000000251	si:ch211-153b23.3	100	71.910	ENSSFOG00015010910	si:ch211-153b23.3	99	71.910	Scleropages_formosus
ENSPNYG00000000251	si:ch211-153b23.3	99	81.663	ENSSMAG00000005446	si:ch211-153b23.3	100	81.663	Scophthalmus_maximus
ENSPNYG00000000251	si:ch211-153b23.3	59	32.448	ENSSDUG00000006671	si:ch211-153b23.4	64	32.448	Seriola_dumerili
ENSPNYG00000000251	si:ch211-153b23.3	100	80.861	ENSSLDG00000008629	si:ch211-153b23.3	100	80.861	Seriola_lalandi_dorsalis
ENSPNYG00000000251	si:ch211-153b23.3	99	75.172	ENSTRUG00000020530	si:ch211-153b23.3	100	75.629	Takifugu_rubripes
ENSPNYG00000000251	si:ch211-153b23.3	93	81.579	ENSTNIG00000008962	si:ch211-153b23.3	99	81.579	Tetraodon_nigroviridis
ENSPNYG00000000251	si:ch211-153b23.3	100	80.866	ENSXMAG00000029318	si:ch211-153b23.3	99	80.866	Xiphophorus_maculatus
ENSPNYG00000000251	si:ch211-153b23.3	59	32.008	ENSXMAG00000021388	si:ch211-153b23.4	62	32.453	Xiphophorus_maculatus