EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000000508 (Gene tree)
Gene ID: 102192664
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 49301 bases
Position: chrJH419229.1:429540-478840
Accession: 102192664
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000000702	S1	PF00575.23	2.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000000713	-	2832	-	ENSPNYP00000000702	943 (aa)	-	-
ENSPNYT00000000735	-	2478	XM_005727303	ENSPNYP00000000724	825 (aa)	XP_005727360	-

Gene Model

Click here to download ENSPNYG00000000508's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000000508's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000000508	si:ch211-117n7.8	96	50.157	ENSG00000068784	SRBD1	90	51.717	Homo_sapiens
ENSPNYG00000000508	si:ch211-117n7.8	100	77.744	ENSAPOG00000005103	si:ch211-117n7.8	97	77.442	Acanthochromis_polyacanthus
ENSPNYG00000000508	si:ch211-117n7.8	96	50.366	ENSAMEG00000005993	SRBD1	85	53.955	Ailuropoda_melanoleuca
ENSPNYG00000000508	si:ch211-117n7.8	99	80.020	ENSACIG00000009875	si:ch211-117n7.8	100	80.020	Amphilophus_citrinellus
ENSPNYG00000000508	si:ch211-117n7.8	100	76.210	ENSAOCG00000024718	si:ch211-117n7.8	97	76.210	Amphiprion_ocellaris
ENSPNYG00000000508	si:ch211-117n7.8	100	76.962	ENSAPEG00000002645	si:ch211-117n7.8	99	76.962	Amphiprion_percula
ENSPNYG00000000508	si:ch211-117n7.8	100	75.334	ENSATEG00000010844	si:ch211-117n7.8	97	75.334	Anabas_testudineus
ENSPNYG00000000508	si:ch211-117n7.8	95	52.495	ENSAPLG00000006313	SRBD1	97	51.423	Anas_platyrhynchos
ENSPNYG00000000508	si:ch211-117n7.8	99	49.389	ENSANAG00000025573	SRBD1	89	52.184	Aotus_nancymaae
ENSPNYG00000000508	si:ch211-117n7.8	100	90.232	ENSACLG00000024219	si:ch211-117n7.8	97	90.232	Astatotilapia_calliptera
ENSPNYG00000000508	si:ch211-117n7.8	99	62.129	ENSAMXG00000004294	SRBD1	97	62.948	Astyanax_mexicanus
ENSPNYG00000000508	si:ch211-117n7.8	96	49.149	ENSBTAG00000007508	SRBD1	86	51.981	Bos_taurus
ENSPNYG00000000508	si:ch211-117n7.8	68	30.389	WBGene00022830	ZK973.1	81	30.389	Caenorhabditis_elegans
ENSPNYG00000000508	si:ch211-117n7.8	97	50.156	ENSCJAG00000000727	SRBD1	91	51.482	Callithrix_jacchus
ENSPNYG00000000508	si:ch211-117n7.8	86	54.299	ENSCAFG00000002554	SRBD1	85	54.181	Canis_familiaris
ENSPNYG00000000508	si:ch211-117n7.8	86	55.181	ENSCAFG00020026284	SRBD1	98	54.862	Canis_lupus_dingo
ENSPNYG00000000508	si:ch211-117n7.8	89	53.837	ENSCHIG00000016535	SRBD1	86	53.494	Capra_hircus
ENSPNYG00000000508	si:ch211-117n7.8	99	50.810	ENSTSYG00000012797	SRBD1	96	51.090	Carlito_syrichta
ENSPNYG00000000508	si:ch211-117n7.8	96	51.012	ENSCPOG00000004773	SRBD1	95	50.691	Cavia_porcellus
ENSPNYG00000000508	si:ch211-117n7.8	96	50.365	ENSCCAG00000025589	SRBD1	90	51.885	Cebus_capucinus
ENSPNYG00000000508	si:ch211-117n7.8	96	50.314	ENSCATG00000039530	SRBD1	90	51.938	Cercocebus_atys
ENSPNYG00000000508	si:ch211-117n7.8	99	49.492	ENSCLAG00000008623	SRBD1	84	54.940	Chinchilla_lanigera
ENSPNYG00000000508	si:ch211-117n7.8	96	49.948	ENSCSAG00000013350	SRBD1	90	51.823	Chlorocebus_sabaeus
ENSPNYG00000000508	si:ch211-117n7.8	73	74.419	ENSCHOG00000003805	SRBD1	70	74.419	Choloepus_hoffmanni
ENSPNYG00000000508	si:ch211-117n7.8	85	56.019	ENSCPBG00000005677	SRBD1	84	56.019	Chrysemys_picta_bellii
ENSPNYG00000000508	si:ch211-117n7.8	80	39.447	ENSCING00000005950	-	99	39.447	Ciona_intestinalis
ENSPNYG00000000508	si:ch211-117n7.8	80	40.637	ENSCSAVG00000000861	-	99	40.637	Ciona_savignyi
ENSPNYG00000000508	si:ch211-117n7.8	91	51.960	ENSCANG00000016307	SRBD1	89	51.794	Colobus_angolensis_palliatus
ENSPNYG00000000508	si:ch211-117n7.8	86	54.231	ENSCGRG00001000513	Srbd1	85	54.231	Cricetulus_griseus_chok1gshd
ENSPNYG00000000508	si:ch211-117n7.8	86	54.231	ENSCGRG00000002283	Srbd1	85	54.231	Cricetulus_griseus_crigri
ENSPNYG00000000508	si:ch211-117n7.8	100	68.432	ENSCSEG00000000856	si:ch211-117n7.8	97	68.534	Cynoglossus_semilaevis
ENSPNYG00000000508	si:ch211-117n7.8	100	72.690	ENSCVAG00000020212	si:ch211-117n7.8	98	72.690	Cyprinodon_variegatus
ENSPNYG00000000508	si:ch211-117n7.8	86	52.996	ENSDNOG00000018686	SRBD1	84	52.879	Dasypus_novemcinctus
ENSPNYG00000000508	si:ch211-117n7.8	99	49.796	ENSDORG00000010468	Srbd1	84	54.545	Dipodomys_ordii
ENSPNYG00000000508	si:ch211-117n7.8	80	33.501	FBgn0051156	CG31156	79	33.501	Drosophila_melanogaster
ENSPNYG00000000508	si:ch211-117n7.8	76	55.596	ENSETEG00000000739	SRBD1	77	55.435	Echinops_telfairi
ENSPNYG00000000508	si:ch211-117n7.8	74	46.648	ENSEBUG00000008902	si:ch211-117n7.8	95	46.648	Eptatretus_burgeri
ENSPNYG00000000508	si:ch211-117n7.8	96	49.737	ENSEASG00005003132	SRBD1	98	54.815	Equus_asinus_asinus
ENSPNYG00000000508	si:ch211-117n7.8	86	53.946	ENSECAG00000013865	SRBD1	83	54.064	Equus_caballus
ENSPNYG00000000508	si:ch211-117n7.8	100	63.547	ENSELUG00000012592	si:ch211-117n7.8	97	62.930	Esox_lucius
ENSPNYG00000000508	si:ch211-117n7.8	86	54.181	ENSFCAG00000005101	SRBD1	84	53.892	Felis_catus
ENSPNYG00000000508	si:ch211-117n7.8	88	55.257	ENSFALG00000012966	SRBD1	96	51.856	Ficedula_albicollis
ENSPNYG00000000508	si:ch211-117n7.8	96	50.909	ENSFDAG00000016670	SRBD1	88	53.497	Fukomys_damarensis
ENSPNYG00000000508	si:ch211-117n7.8	100	74.119	ENSFHEG00000019480	si:ch211-117n7.8	97	74.018	Fundulus_heteroclitus
ENSPNYG00000000508	si:ch211-117n7.8	50	71.464	ENSGMOG00000018010	-	96	71.464	Gadus_morhua
ENSPNYG00000000508	si:ch211-117n7.8	85	56.766	ENSGALG00000009990	SRBD1	97	51.534	Gallus_gallus
ENSPNYG00000000508	si:ch211-117n7.8	100	73.727	ENSGAFG00000019664	si:ch211-117n7.8	97	73.727	Gambusia_affinis
ENSPNYG00000000508	si:ch211-117n7.8	64	83.228	ENSGACG00000010794	si:ch211-117n7.8	100	83.228	Gasterosteus_aculeatus
ENSPNYG00000000508	si:ch211-117n7.8	85	56.615	ENSGAGG00000006166	SRBD1	99	56.257	Gopherus_agassizii
ENSPNYG00000000508	si:ch211-117n7.8	99	49.696	ENSGGOG00000005910	SRBD1	92	52.260	Gorilla_gorilla
ENSPNYG00000000508	si:ch211-117n7.8	100	86.426	ENSHBUG00000013207	si:ch211-117n7.8	99	86.426	Haplochromis_burtoni
ENSPNYG00000000508	si:ch211-117n7.8	99	49.898	ENSHGLG00000018153	-	84	54.502	Heterocephalus_glaber_female
ENSPNYG00000000508	si:ch211-117n7.8	99	49.898	ENSHGLG00100015183	-	94	50.697	Heterocephalus_glaber_male
ENSPNYG00000000508	si:ch211-117n7.8	99	63.762	ENSIPUG00000009661	srbd1	97	63.808	Ictalurus_punctatus
ENSPNYG00000000508	si:ch211-117n7.8	86	55.012	ENSSTOG00000005898	SRBD1	85	55.012	Ictidomys_tridecemlineatus
ENSPNYG00000000508	si:ch211-117n7.8	99	48.118	ENSJJAG00000022244	Srbd1	95	48.729	Jaculus_jaculus
ENSPNYG00000000508	si:ch211-117n7.8	100	76.555	ENSKMAG00000003473	si:ch211-117n7.8	97	76.085	Kryptolebias_marmoratus
ENSPNYG00000000508	si:ch211-117n7.8	100	74.722	ENSLBEG00000027518	si:ch211-117n7.8	97	74.419	Labrus_bergylta
ENSPNYG00000000508	si:ch211-117n7.8	86	55.257	ENSLACG00000009790	SRBD1	99	55.140	Latimeria_chalumnae
ENSPNYG00000000508	si:ch211-117n7.8	99	59.086	ENSLOCG00000016360	si:ch211-117n7.8	97	57.712	Lepisosteus_oculatus
ENSPNYG00000000508	si:ch211-117n7.8	96	50.210	ENSMFAG00000042026	SRBD1	90	51.827	Macaca_fascicularis
ENSPNYG00000000508	si:ch211-117n7.8	92	51.938	ENSMMUG00000003490	SRBD1	90	51.827	Macaca_mulatta
ENSPNYG00000000508	si:ch211-117n7.8	96	49.160	ENSMNEG00000034701	SRBD1	90	50.721	Macaca_nemestrina
ENSPNYG00000000508	si:ch211-117n7.8	96	50.314	ENSMLEG00000000745	SRBD1	90	51.938	Mandrillus_leucophaeus
ENSPNYG00000000508	si:ch211-117n7.8	100	76.615	ENSMAMG00000021921	si:ch211-117n7.8	97	77.128	Mastacembelus_armatus
ENSPNYG00000000508	si:ch211-117n7.8	100	90.332	ENSMZEG00005027369	si:ch211-117n7.8	97	90.332	Maylandia_zebra
ENSPNYG00000000508	si:ch211-117n7.8	81	55.886	ENSMGAG00000010273	SRBD1	99	55.817	Meleagris_gallopavo
ENSPNYG00000000508	si:ch211-117n7.8	80	52.898	ENSMAUG00000013916	Srbd1	95	52.898	Mesocricetus_auratus
ENSPNYG00000000508	si:ch211-117n7.8	96	50.676	ENSMICG00000007835	SRBD1	95	50.894	Microcebus_murinus
ENSPNYG00000000508	si:ch211-117n7.8	86	53.874	ENSMOCG00000018716	Srbd1	85	54.112	Microtus_ochrogaster
ENSPNYG00000000508	si:ch211-117n7.8	99	73.490	ENSMMOG00000007507	si:ch211-117n7.8	100	73.388	Mola_mola
ENSPNYG00000000508	si:ch211-117n7.8	100	75.101	ENSMALG00000001562	si:ch211-117n7.8	97	75.504	Monopterus_albus
ENSPNYG00000000508	si:ch211-117n7.8	96	50.474	MGP_CAROLIEiJ_G0021934	Srbd1	99	58.882	Mus_caroli
ENSPNYG00000000508	si:ch211-117n7.8	99	49.693	ENSMUSG00000024135	Srbd1	96	56.343	Mus_musculus
ENSPNYG00000000508	si:ch211-117n7.8	99	49.078	MGP_PahariEiJ_G0020924	Srbd1	91	51.835	Mus_pahari
ENSPNYG00000000508	si:ch211-117n7.8	99	49.693	MGP_SPRETEiJ_G0022850	Srbd1	91	52.392	Mus_spretus
ENSPNYG00000000508	si:ch211-117n7.8	96	51.143	ENSMLUG00000007039	SRBD1	96	50.729	Myotis_lucifugus
ENSPNYG00000000508	si:ch211-117n7.8	86	52.359	ENSNGAG00000011893	Srbd1	85	52.359	Nannospalax_galili
ENSPNYG00000000508	si:ch211-117n7.8	100	94.753	ENSNBRG00000012873	si:ch211-117n7.8	99	94.753	Neolamprologus_brichardi
ENSPNYG00000000508	si:ch211-117n7.8	96	49.738	ENSNLEG00000016877	SRBD1	90	51.495	Nomascus_leucogenys
ENSPNYG00000000508	si:ch211-117n7.8	96	50.483	ENSODEG00000012095	SRBD1	95	50.596	Octodon_degus
ENSPNYG00000000508	si:ch211-117n7.8	100	89.325	ENSONIG00000000945	si:ch211-117n7.8	100	90.250	Oreochromis_niloticus
ENSPNYG00000000508	si:ch211-117n7.8	96	50.575	ENSOCUG00000015385	SRBD1	95	51.003	Oryctolagus_cuniculus
ENSPNYG00000000508	si:ch211-117n7.8	99	69.161	ENSORLG00000004427	si:ch211-117n7.8	97	69.161	Oryzias_latipes
ENSPNYG00000000508	si:ch211-117n7.8	99	72.020	ENSORLG00020012792	si:ch211-117n7.8	97	72.020	Oryzias_latipes_hni
ENSPNYG00000000508	si:ch211-117n7.8	99	71.790	ENSORLG00015018598	si:ch211-117n7.8	97	71.790	Oryzias_latipes_hsok
ENSPNYG00000000508	si:ch211-117n7.8	100	71.313	ENSOMEG00000012229	si:ch211-117n7.8	96	81.061	Oryzias_melastigma
ENSPNYG00000000508	si:ch211-117n7.8	96	48.753	ENSOGAG00000001076	SRBD1	91	50.219	Otolemur_garnettii
ENSPNYG00000000508	si:ch211-117n7.8	89	50.110	ENSOARG00000005958	SRBD1	87	49.780	Ovis_aries
ENSPNYG00000000508	si:ch211-117n7.8	86	54.654	ENSPPAG00000038442	SRBD1	90	52.009	Pan_paniscus
ENSPNYG00000000508	si:ch211-117n7.8	86	54.481	ENSPPRG00000003449	SRBD1	84	54.363	Panthera_pardus
ENSPNYG00000000508	si:ch211-117n7.8	86	54.481	ENSPTIG00000012495	SRBD1	84	54.363	Panthera_tigris_altaica
ENSPNYG00000000508	si:ch211-117n7.8	86	54.255	ENSPTRG00000011889	SRBD1	90	51.659	Pan_troglodytes
ENSPNYG00000000508	si:ch211-117n7.8	92	51.938	ENSPANG00000008063	SRBD1	90	51.827	Papio_anubis
ENSPNYG00000000508	si:ch211-117n7.8	96	59.872	ENSPKIG00000021973	si:ch211-117n7.8	96	59.574	Paramormyrops_kingsleyae
ENSPNYG00000000508	si:ch211-117n7.8	85	55.781	ENSPSIG00000008992	SRBD1	84	55.529	Pelodiscus_sinensis
ENSPNYG00000000508	si:ch211-117n7.8	100	69.121	ENSPMGG00000013348	si:ch211-117n7.8	99	69.293	Periophthalmus_magnuspinnatus
ENSPNYG00000000508	si:ch211-117n7.8	86	52.521	ENSPEMG00000020684	Srbd1	84	52.521	Peromyscus_maniculatus_bairdii
ENSPNYG00000000508	si:ch211-117n7.8	100	75.051	ENSPFOG00000010650	si:ch211-117n7.8	97	74.847	Poecilia_formosa
ENSPNYG00000000508	si:ch211-117n7.8	100	75.153	ENSPLAG00000002141	si:ch211-117n7.8	97	74.949	Poecilia_latipinna
ENSPNYG00000000508	si:ch211-117n7.8	100	75.153	ENSPMEG00000018537	si:ch211-117n7.8	97	74.949	Poecilia_mexicana
ENSPNYG00000000508	si:ch211-117n7.8	100	74.256	ENSPREG00000003258	si:ch211-117n7.8	97	74.051	Poecilia_reticulata
ENSPNYG00000000508	si:ch211-117n7.8	96	46.523	ENSPPYG00000012444	SRBD1	88	48.004	Pongo_abelii
ENSPNYG00000000508	si:ch211-117n7.8	77	49.137	ENSPCAG00000005629	SRBD1	80	48.738	Procavia_capensis
ENSPNYG00000000508	si:ch211-117n7.8	96	43.992	ENSPCOG00000017669	SRBD1	94	44.034	Propithecus_coquereli
ENSPNYG00000000508	si:ch211-117n7.8	75	53.783	ENSPVAG00000001782	SRBD1	72	53.645	Pteropus_vampyrus
ENSPNYG00000000508	si:ch211-117n7.8	97	63.407	ENSPNAG00000013492	SRBD1	97	62.168	Pygocentrus_nattereri
ENSPNYG00000000508	si:ch211-117n7.8	85	54.197	ENSRNOG00000014720	Srbd1	83	54.197	Rattus_norvegicus
ENSPNYG00000000508	si:ch211-117n7.8	96	49.790	ENSRBIG00000033486	SRBD1	89	51.848	Rhinopithecus_bieti
ENSPNYG00000000508	si:ch211-117n7.8	96	49.790	ENSRROG00000041599	SRBD1	89	51.848	Rhinopithecus_roxellana
ENSPNYG00000000508	si:ch211-117n7.8	99	49.287	ENSSBOG00000024982	SRBD1	90	51.881	Saimiri_boliviensis_boliviensis
ENSPNYG00000000508	si:ch211-117n7.8	99	58.091	ENSSFOG00015001128	si:ch211-117n7.8	91	62.932	Scleropages_formosus
ENSPNYG00000000508	si:ch211-117n7.8	100	74.372	ENSSMAG00000018256	si:ch211-117n7.8	97	74.372	Scophthalmus_maximus
ENSPNYG00000000508	si:ch211-117n7.8	100	77.083	ENSSLDG00000023189	si:ch211-117n7.8	99	77.083	Seriola_lalandi_dorsalis
ENSPNYG00000000508	si:ch211-117n7.8	96	47.932	ENSSARG00000009740	SRBD1	96	47.604	Sorex_araneus
ENSPNYG00000000508	si:ch211-117n7.8	87	56.465	ENSSPUG00000010475	SRBD1	94	56.243	Sphenodon_punctatus
ENSPNYG00000000508	si:ch211-117n7.8	100	75.453	ENSSPAG00000008092	-	99	76.406	Stegastes_partitus
ENSPNYG00000000508	si:ch211-117n7.8	96	50.626	ENSSSCG00000008445	SRBD1	83	53.892	Sus_scrofa
ENSPNYG00000000508	si:ch211-117n7.8	85	56.086	ENSTGUG00000003878	SRBD1	100	55.900	Taeniopygia_guttata
ENSPNYG00000000508	si:ch211-117n7.8	100	70.441	ENSTRUG00000007080	si:ch211-117n7.8	98	74.775	Takifugu_rubripes
ENSPNYG00000000508	si:ch211-117n7.8	99	69.422	ENSTNIG00000007464	si:ch211-117n7.8	97	68.825	Tetraodon_nigroviridis
ENSPNYG00000000508	si:ch211-117n7.8	90	53.810	ENSTTRG00000011871	SRBD1	86	57.065	Tursiops_truncatus
ENSPNYG00000000508	si:ch211-117n7.8	86	54.417	ENSUAMG00000008126	SRBD1	97	54.513	Ursus_americanus
ENSPNYG00000000508	si:ch211-117n7.8	86	54.181	ENSUMAG00000012902	SRBD1	83	54.299	Ursus_maritimus
ENSPNYG00000000508	si:ch211-117n7.8	86	53.955	ENSVPAG00000006825	SRBD1	93	53.239	Vicugna_pacos
ENSPNYG00000000508	si:ch211-117n7.8	86	54.363	ENSVVUG00000005389	SRBD1	85	54.245	Vulpes_vulpes
ENSPNYG00000000508	si:ch211-117n7.8	99	44.916	ENSXETG00000002760	srbd1	96	44.225	Xenopus_tropicalis
ENSPNYG00000000508	si:ch211-117n7.8	100	74.338	ENSXMAG00000016861	si:ch211-117n7.8	97	74.134	Xiphophorus_maculatus