EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000000932 (Gene tree)
Gene ID: 102192891
Gene Symbol: snd1
Alias: SN4TDR|TDRD11|p100L|p100S|wu:fc27g10
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 177320 bases
Position: chrJH419257.1:2201096-2378415
Accession: 102192891
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000001227	TUDOR	PF00567.24	3.5e-28	1	1
ENSPNYP00000001227	SNase	PF00565.17	1.2e-64	1	4
ENSPNYP00000001227	SNase	PF00565.17	1.2e-64	2	4
ENSPNYP00000001227	SNase	PF00565.17	1.2e-64	3	4
ENSPNYP00000001227	SNase	PF00565.17	1.2e-64	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000001247	-	4071	XM_013910931	ENSPNYP00000001227	910 (aa)	XP_013766385	UPI0006AAE8E1

Gene Model

Click here to download ENSPNYG00000000932's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000000932's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000000932	snd1	99	83.964	ENSG00000197157	SND1	99	82.967	Homo_sapiens
ENSPNYG00000000932	snd1	100	95.170	ENSAPOG00000017599	snd1	100	95.170	Acanthochromis_polyacanthus
ENSPNYG00000000932	snd1	100	83.151	ENSAMEG00000004664	SND1	94	83.151	Ailuropoda_melanoleuca
ENSPNYG00000000932	snd1	100	92.536	ENSACIG00000003551	snd1	100	92.536	Amphilophus_citrinellus
ENSPNYG00000000932	snd1	100	94.951	ENSAOCG00000014166	snd1	100	94.951	Amphiprion_ocellaris
ENSPNYG00000000932	snd1	100	94.731	ENSAPEG00000007067	snd1	100	94.731	Amphiprion_percula
ENSPNYG00000000932	snd1	98	94.295	ENSATEG00000018475	snd1	89	94.295	Anabas_testudineus
ENSPNYG00000000932	snd1	99	84.076	ENSANAG00000034463	SND1	99	84.312	Aotus_nancymaae
ENSPNYG00000000932	snd1	100	99.890	ENSACLG00000022897	snd1	100	99.890	Astatotilapia_calliptera
ENSPNYG00000000932	snd1	99	90.110	ENSAMXG00000016318	snd1	99	90.110	Astyanax_mexicanus
ENSPNYG00000000932	snd1	99	84.298	ENSBTAG00000010692	SND1	99	83.297	Bos_taurus
ENSPNYG00000000932	snd1	98	46.739	WBGene00006626	tsn-1	99	47.065	Caenorhabditis_elegans
ENSPNYG00000000932	snd1	99	83.853	ENSCJAG00000017668	SND1	99	84.086	Callithrix_jacchus
ENSPNYG00000000932	snd1	100	83.443	ENSCAFG00000001700	SND1	100	83.443	Canis_familiaris
ENSPNYG00000000932	snd1	100	83.443	ENSCAFG00020021639	SND1	100	83.443	Canis_lupus_dingo
ENSPNYG00000000932	snd1	99	84.187	ENSCHIG00000023390	SND1	98	84.424	Capra_hircus
ENSPNYG00000000932	snd1	70	86.667	ENSTSYG00000004979	SND1	96	86.667	Carlito_syrichta
ENSPNYG00000000932	snd1	98	73.192	ENSCAPG00000010677	SND1	98	73.192	Cavia_aperea
ENSPNYG00000000932	snd1	99	83.964	ENSCPOG00000006251	SND1	99	82.967	Cavia_porcellus
ENSPNYG00000000932	snd1	99	84.076	ENSCCAG00000036847	SND1	98	84.312	Cebus_capucinus
ENSPNYG00000000932	snd1	99	84.187	ENSCATG00000035214	SND1	99	84.424	Cercocebus_atys
ENSPNYG00000000932	snd1	99	84.187	ENSCLAG00000011796	SND1	100	83.333	Chinchilla_lanigera
ENSPNYG00000000932	snd1	99	84.187	ENSCSAG00000010182	SND1	99	83.187	Chlorocebus_sabaeus
ENSPNYG00000000932	snd1	78	76.471	ENSCHOG00000002218	SND1	86	76.471	Choloepus_hoffmanni
ENSPNYG00000000932	snd1	100	83.644	ENSCPBG00000018094	SND1	100	83.644	Chrysemys_picta_bellii
ENSPNYG00000000932	snd1	98	57.364	ENSCING00000000524	-	99	56.786	Ciona_intestinalis
ENSPNYG00000000932	snd1	99	57.503	ENSCSAVG00000008807	-	99	57.503	Ciona_savignyi
ENSPNYG00000000932	snd1	99	84.187	ENSCANG00000035119	SND1	99	83.187	Colobus_angolensis_palliatus
ENSPNYG00000000932	snd1	99	83.853	ENSCGRG00001022514	Snd1	100	83.114	Cricetulus_griseus_chok1gshd
ENSPNYG00000000932	snd1	97	84.086	ENSCGRG00000012277	Snd1	99	84.086	Cricetulus_griseus_crigri
ENSPNYG00000000932	snd1	100	92.426	ENSCSEG00000008661	snd1	100	92.426	Cynoglossus_semilaevis
ENSPNYG00000000932	snd1	100	94.072	ENSCVAG00000010316	snd1	100	94.072	Cyprinodon_variegatus
ENSPNYG00000000932	snd1	100	89.485	ENSDARG00000006766	snd1	99	91.182	Danio_rerio
ENSPNYG00000000932	snd1	97	82.340	ENSDNOG00000006795	SND1	100	82.340	Dasypus_novemcinctus
ENSPNYG00000000932	snd1	99	83.964	ENSDORG00000000336	Snd1	99	82.967	Dipodomys_ordii
ENSPNYG00000000932	snd1	99	50.862	FBgn0035121	Tudor-SN	99	50.532	Drosophila_melanogaster
ENSPNYG00000000932	snd1	90	91.667	ENSETEG00000000375	SND1	92	91.667	Echinops_telfairi
ENSPNYG00000000932	snd1	68	64.921	ENSEBUG00000014201	-	84	76.630	Eptatretus_burgeri
ENSPNYG00000000932	snd1	99	82.804	ENSEASG00005008513	SND1	99	81.838	Equus_asinus_asinus
ENSPNYG00000000932	snd1	99	83.964	ENSECAG00000011451	SND1	99	82.967	Equus_caballus
ENSPNYG00000000932	snd1	99	74.610	ENSEEUG00000014737	SND1	99	73.846	Erinaceus_europaeus
ENSPNYG00000000932	snd1	99	88.462	ENSELUG00000001805	snd1	96	88.462	Esox_lucius
ENSPNYG00000000932	snd1	100	83.333	ENSFCAG00000008289	SND1	100	83.333	Felis_catus
ENSPNYG00000000932	snd1	98	83.929	ENSFDAG00000015881	SND1	100	82.895	Fukomys_damarensis
ENSPNYG00000000932	snd1	100	92.266	ENSFHEG00000004093	snd1	99	93.857	Fundulus_heteroclitus
ENSPNYG00000000932	snd1	75	84.746	ENSGMOG00000018932	snd1	66	84.746	Gadus_morhua
ENSPNYG00000000932	snd1	100	94.621	ENSGAFG00000008421	snd1	100	94.621	Gambusia_affinis
ENSPNYG00000000932	snd1	100	60.304	ENSGACG00000019793	snd1	100	60.304	Gasterosteus_aculeatus
ENSPNYG00000000932	snd1	99	84.187	ENSGGOG00000009614	SND1	99	84.424	Gorilla_gorilla
ENSPNYG00000000932	snd1	100	99.560	ENSHBUG00000019135	snd1	100	99.560	Haplochromis_burtoni
ENSPNYG00000000932	snd1	99	83.853	ENSHGLG00000003618	SND1	99	82.857	Heterocephalus_glaber_female
ENSPNYG00000000932	snd1	99	83.187	ENSHGLG00100012449	SND1	99	83.187	Heterocephalus_glaber_male
ENSPNYG00000000932	snd1	100	92.206	ENSHCOG00000005266	snd1	100	92.206	Hippocampus_comes
ENSPNYG00000000932	snd1	99	88.584	ENSIPUG00000013279	snd1	99	88.584	Ictalurus_punctatus
ENSPNYG00000000932	snd1	99	84.187	ENSSTOG00000002140	SND1	99	83.187	Ictidomys_tridecemlineatus
ENSPNYG00000000932	snd1	99	84.076	ENSJJAG00000009561	Snd1	99	83.077	Jaculus_jaculus
ENSPNYG00000000932	snd1	100	94.182	ENSKMAG00000016997	snd1	100	94.182	Kryptolebias_marmoratus
ENSPNYG00000000932	snd1	100	93.194	ENSLBEG00000013563	snd1	100	93.194	Labrus_bergylta
ENSPNYG00000000932	snd1	98	88.606	ENSLOCG00000015537	snd1	99	87.704	Lepisosteus_oculatus
ENSPNYG00000000932	snd1	99	83.516	ENSLAFG00000009696	SND1	99	83.516	Loxodonta_africana
ENSPNYG00000000932	snd1	99	84.187	ENSMFAG00000038114	SND1	99	84.424	Macaca_fascicularis
ENSPNYG00000000932	snd1	99	84.187	ENSMMUG00000015432	SND1	99	83.187	Macaca_mulatta
ENSPNYG00000000932	snd1	99	84.187	ENSMNEG00000039808	SND1	100	84.442	Macaca_nemestrina
ENSPNYG00000000932	snd1	99	84.076	ENSMLEG00000029040	SND1	100	84.329	Mandrillus_leucophaeus
ENSPNYG00000000932	snd1	100	94.951	ENSMAMG00000011739	snd1	100	94.951	Mastacembelus_armatus
ENSPNYG00000000932	snd1	100	99.890	ENSMZEG00005005681	snd1	100	99.890	Maylandia_zebra
ENSPNYG00000000932	snd1	99	84.076	ENSMICG00000000097	SND1	99	83.077	Microcebus_murinus
ENSPNYG00000000932	snd1	99	84.298	ENSMOCG00000005040	Snd1	99	83.297	Microtus_ochrogaster
ENSPNYG00000000932	snd1	100	93.524	ENSMMOG00000001795	snd1	100	93.524	Mola_mola
ENSPNYG00000000932	snd1	98	83.929	ENSMODG00000015182	SND1	100	82.895	Monodelphis_domestica
ENSPNYG00000000932	snd1	100	94.182	ENSMALG00000012071	snd1	100	94.182	Monopterus_albus
ENSPNYG00000000932	snd1	98	84.152	MGP_CAROLIEiJ_G0028159	Snd1	99	84.317	Mus_caroli
ENSPNYG00000000932	snd1	98	83.929	ENSMUSG00000001424	Snd1	99	82.747	Mus_musculus
ENSPNYG00000000932	snd1	98	84.152	MGP_PahariEiJ_G0021917	Snd1	99	84.317	Mus_pahari
ENSPNYG00000000932	snd1	98	84.152	MGP_SPRETEiJ_G0029159	Snd1	99	83.003	Mus_spretus
ENSPNYG00000000932	snd1	100	83.333	ENSMPUG00000006545	SND1	100	83.333	Mustela_putorius_furo
ENSPNYG00000000932	snd1	97	83.166	ENSMLUG00000017130	SND1	99	83.166	Myotis_lucifugus
ENSPNYG00000000932	snd1	99	83.964	ENSNGAG00000011186	Snd1	99	82.967	Nannospalax_galili
ENSPNYG00000000932	snd1	100	99.670	ENSNBRG00000006681	snd1	100	99.670	Neolamprologus_brichardi
ENSPNYG00000000932	snd1	99	83.516	ENSNLEG00000012263	SND1	100	84.442	Nomascus_leucogenys
ENSPNYG00000000932	snd1	91	91.667	ENSOPRG00000013405	SND1	92	91.667	Ochotona_princeps
ENSPNYG00000000932	snd1	99	84.187	ENSODEG00000011502	SND1	100	83.315	Octodon_degus
ENSPNYG00000000932	snd1	100	99.121	ENSONIG00000011481	snd1	97	99.121	Oreochromis_niloticus
ENSPNYG00000000932	snd1	98	83.596	ENSOANG00000000817	SND1	98	83.596	Ornithorhynchus_anatinus
ENSPNYG00000000932	snd1	99	82.747	ENSOCUG00000001620	SND1	99	82.747	Oryctolagus_cuniculus
ENSPNYG00000000932	snd1	100	92.645	ENSORLG00000015201	snd1	100	92.645	Oryzias_latipes
ENSPNYG00000000932	snd1	100	92.865	ENSORLG00020013991	snd1	100	92.865	Oryzias_latipes_hni
ENSPNYG00000000932	snd1	100	92.865	ENSORLG00015012436	snd1	100	92.865	Oryzias_latipes_hsok
ENSPNYG00000000932	snd1	100	93.633	ENSOMEG00000006406	snd1	100	93.633	Oryzias_melastigma
ENSPNYG00000000932	snd1	99	84.000	ENSOGAG00000013356	SND1	93	83.333	Otolemur_garnettii
ENSPNYG00000000932	snd1	97	82.074	ENSOARG00000002149	SND1	100	82.074	Ovis_aries
ENSPNYG00000000932	snd1	99	84.076	ENSPPAG00000042947	SND1	99	83.705	Pan_paniscus
ENSPNYG00000000932	snd1	100	83.333	ENSPPRG00000004494	SND1	100	83.333	Panthera_pardus
ENSPNYG00000000932	snd1	100	83.224	ENSPTIG00000014214	SND1	100	83.224	Panthera_tigris_altaica
ENSPNYG00000000932	snd1	99	84.076	ENSPTRG00000023911	SND1	99	84.312	Pan_troglodytes
ENSPNYG00000000932	snd1	97	84.424	ENSPANG00000011997	SND1	99	84.424	Papio_anubis
ENSPNYG00000000932	snd1	99	86.976	ENSPKIG00000023494	snd1	99	86.369	Paramormyrops_kingsleyae
ENSPNYG00000000932	snd1	92	93.421	ENSPMGG00000003629	snd1	100	93.421	Periophthalmus_magnuspinnatus
ENSPNYG00000000932	snd1	99	84.076	ENSPEMG00000010240	Snd1	99	83.077	Peromyscus_maniculatus_bairdii
ENSPNYG00000000932	snd1	97	73.928	ENSPMAG00000007915	-	99	73.928	Petromyzon_marinus
ENSPNYG00000000932	snd1	98	84.487	ENSPCIG00000011561	SND1	100	83.443	Phascolarctos_cinereus
ENSPNYG00000000932	snd1	100	94.621	ENSPFOG00000001557	snd1	100	94.621	Poecilia_formosa
ENSPNYG00000000932	snd1	100	94.841	ENSPLAG00000018459	snd1	97	94.841	Poecilia_latipinna
ENSPNYG00000000932	snd1	100	94.621	ENSPMEG00000006803	snd1	100	94.621	Poecilia_mexicana
ENSPNYG00000000932	snd1	100	94.512	ENSPREG00000002189	snd1	100	94.512	Poecilia_reticulata
ENSPNYG00000000932	snd1	91	91.667	ENSPPYG00000017972	SND1	99	91.667	Pongo_abelii
ENSPNYG00000000932	snd1	99	74.276	ENSPCAG00000011305	SND1	99	73.516	Procavia_capensis
ENSPNYG00000000932	snd1	99	84.187	ENSPCOG00000026791	SND1	100	84.442	Propithecus_coquereli
ENSPNYG00000000932	snd1	99	82.405	ENSPVAG00000013945	SND1	99	81.429	Pteropus_vampyrus
ENSPNYG00000000932	snd1	99	90.549	ENSPNAG00000001206	snd1	99	90.549	Pygocentrus_nattereri
ENSPNYG00000000932	snd1	98	83.929	ENSRNOG00000031173	Snd1	100	83.089	Rattus_norvegicus
ENSPNYG00000000932	snd1	70	87.079	ENSRBIG00000027782	-	93	87.121	Rhinopithecus_bieti
ENSPNYG00000000932	snd1	99	84.187	ENSRROG00000033020	SND1	99	83.187	Rhinopithecus_roxellana
ENSPNYG00000000932	snd1	99	84.076	ENSSBOG00000032461	SND1	99	84.312	Saimiri_boliviensis_boliviensis
ENSPNYG00000000932	snd1	98	81.124	ENSSHAG00000015359	SND1	100	81.124	Sarcophilus_harrisii
ENSPNYG00000000932	snd1	98	87.583	ENSSFOG00015001103	snd1	99	86.710	Scleropages_formosus
ENSPNYG00000000932	snd1	100	93.633	ENSSMAG00000001932	snd1	95	93.633	Scophthalmus_maximus
ENSPNYG00000000932	snd1	100	94.841	ENSSDUG00000002699	snd1	94	94.841	Seriola_dumerili
ENSPNYG00000000932	snd1	100	87.596	ENSSLDG00000001950	snd1	100	87.596	Seriola_lalandi_dorsalis
ENSPNYG00000000932	snd1	86	79.381	ENSSARG00000004877	SND1	92	79.381	Sorex_araneus
ENSPNYG00000000932	snd1	70	80.243	ENSSPUG00000017586	SND1	96	80.243	Sphenodon_punctatus
ENSPNYG00000000932	snd1	73	94.416	ENSSPAG00000021398	snd1	99	94.416	Stegastes_partitus
ENSPNYG00000000932	snd1	99	84.187	ENSSSCG00000016590	SND1	99	83.187	Sus_scrofa
ENSPNYG00000000932	snd1	100	93.792	ENSTRUG00000014067	snd1	100	91.877	Takifugu_rubripes
ENSPNYG00000000932	snd1	100	92.865	ENSTNIG00000011019	snd1	100	92.865	Tetraodon_nigroviridis
ENSPNYG00000000932	snd1	93	78.588	ENSTBEG00000003999	SND1	100	78.588	Tupaia_belangeri
ENSPNYG00000000932	snd1	99	79.955	ENSTTRG00000006059	SND1	99	79.011	Tursiops_truncatus
ENSPNYG00000000932	snd1	69	76.440	ENSUAMG00000002820	-	89	76.440	Ursus_americanus
ENSPNYG00000000932	snd1	87	83.840	ENSUAMG00000005604	-	93	83.840	Ursus_americanus
ENSPNYG00000000932	snd1	100	83.333	ENSUMAG00000005960	SND1	100	83.333	Ursus_maritimus
ENSPNYG00000000932	snd1	77	91.667	ENSVPAG00000008302	SND1	74	91.667	Vicugna_pacos
ENSPNYG00000000932	snd1	100	83.333	ENSVVUG00000007226	SND1	100	83.333	Vulpes_vulpes
ENSPNYG00000000932	snd1	97	80.947	ENSXETG00000023043	snd1	100	80.936	Xenopus_tropicalis
ENSPNYG00000000932	snd1	92	91.924	ENSXCOG00000013629	snd1	99	91.924	Xiphophorus_couchianus
ENSPNYG00000000932	snd1	100	95.060	ENSXMAG00000011469	snd1	100	95.060	Xiphophorus_maculatus