EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000001047 (Gene tree)
Gene ID: 102195179
Gene Symbol: -
Alias: -
Full Name: tetratricopeptide repeat protein 31-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 10123 bases
Position: chrJH419476.1:63997-74119
Accession: 102195179
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000001272	RRM_1	PF00076.22	2.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000001294	-	3204	XM_005750366	ENSPNYP00000001272	609 (aa)	XP_005750423	UPI0003AF5236

Gene Model

Click here to download ENSPNYG00000001047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000001047's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000001047	-	57	42.975	ENSPNYG00000018262	si:dkey-33c12.4	61	40.048
ENSPNYG00000001047	-	52	32.075	ENSPNYG00000023304	-	50	43.478

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000001047	-	75	37.605	ENSAPOG00000005058	si:dkey-33c12.4	60	39.759	Acanthochromis_polyacanthus
ENSPNYG00000001047	-	66	38.028	ENSAPOG00000001034	-	62	38.028	Acanthochromis_polyacanthus
ENSPNYG00000001047	-	51	38.119	ENSAPOG00000019633	zgc:123010	56	38.119	Acanthochromis_polyacanthus
ENSPNYG00000001047	-	100	64.480	ENSAPOG00000022403	-	95	64.640	Acanthochromis_polyacanthus
ENSPNYG00000001047	-	100	65.238	ENSAOCG00000000431	-	95	65.238	Amphiprion_ocellaris
ENSPNYG00000001047	-	52	38.119	ENSAOCG00000005910	zgc:123010	51	38.119	Amphiprion_ocellaris
ENSPNYG00000001047	-	60	42.547	ENSAOCG00000020066	si:dkey-33c12.4	50	41.848	Amphiprion_ocellaris
ENSPNYG00000001047	-	52	38.119	ENSAPEG00000014305	zgc:123010	54	38.119	Amphiprion_percula
ENSPNYG00000001047	-	100	65.714	ENSAPEG00000023603	-	95	65.714	Amphiprion_percula
ENSPNYG00000001047	-	100	62.500	ENSATEG00000018302	-	95	63.666	Anabas_testudineus
ENSPNYG00000001047	-	70	40.611	ENSATEG00000018885	si:dkey-33c12.4	63	42.180	Anabas_testudineus
ENSPNYG00000001047	-	100	98.030	ENSACLG00000003019	-	100	98.030	Astatotilapia_calliptera
ENSPNYG00000001047	-	74	36.920	ENSACLG00000014192	si:dkey-33c12.4	64	39.623	Astatotilapia_calliptera
ENSPNYG00000001047	-	51	36.923	ENSACLG00000012346	-	50	36.923	Astatotilapia_calliptera
ENSPNYG00000001047	-	79	43.662	ENSAMXG00000010871	si:dkey-33c12.4	59	48.201	Astyanax_mexicanus
ENSPNYG00000001047	-	62	33.684	ENSCPBG00000024454	-	50	32.987	Chrysemys_picta_bellii
ENSPNYG00000001047	-	99	52.146	ENSCSEG00000002755	-	95	52.579	Cynoglossus_semilaevis
ENSPNYG00000001047	-	100	57.484	ENSCVAG00000004187	-	100	55.943	Cyprinodon_variegatus
ENSPNYG00000001047	-	53	43.438	ENSCVAG00000006564	-	59	38.875	Cyprinodon_variegatus
ENSPNYG00000001047	-	77	43.424	ENSDARG00000057890	si:dkey-33c12.4	69	42.827	Danio_rerio
ENSPNYG00000001047	-	52	34.395	ENSEBUG00000001368	-	57	32.668	Eptatretus_burgeri
ENSPNYG00000001047	-	95	43.189	ENSELUG00000001633	-	82	44.602	Esox_lucius
ENSPNYG00000001047	-	52	37.156	ENSELUG00000022008	zgc:123010	65	37.559	Esox_lucius
ENSPNYG00000001047	-	84	41.667	ENSELUG00000002009	si:dkey-33c12.4	65	63.971	Esox_lucius
ENSPNYG00000001047	-	69	34.568	ENSFHEG00000002306	zgc:123010	51	38.916	Fundulus_heteroclitus
ENSPNYG00000001047	-	57	40.896	ENSFHEG00000005521	si:dkey-33c12.4	59	39.175	Fundulus_heteroclitus
ENSPNYG00000001047	-	94	55.857	ENSFHEG00000009983	-	96	54.499	Fundulus_heteroclitus
ENSPNYG00000001047	-	100	59.968	ENSGAFG00000016594	-	95	58.533	Gambusia_affinis
ENSPNYG00000001047	-	52	44.954	ENSGAFG00000017596	si:dkey-33c12.4	56	41.495	Gambusia_affinis
ENSPNYG00000001047	-	50	48.936	ENSGACG00000004936	-	78	48.936	Gasterosteus_aculeatus
ENSPNYG00000001047	-	74	36.998	ENSHBUG00000010735	si:dkey-33c12.4	61	39.618	Haplochromis_burtoni
ENSPNYG00000001047	-	51	36.923	ENSHBUG00000016720	-	50	36.923	Haplochromis_burtoni
ENSPNYG00000001047	-	83	44.933	ENSIPUG00000005998	si:dkey-33c12.4	58	48.768	Ictalurus_punctatus
ENSPNYG00000001047	-	99	60.582	ENSKMAG00000006468	-	97	59.265	Kryptolebias_marmoratus
ENSPNYG00000001047	-	54	41.641	ENSKMAG00000016610	si:dkey-33c12.4	54	39.305	Kryptolebias_marmoratus
ENSPNYG00000001047	-	72	30.180	ENSKMAG00000021350	zgc:123010	52	31.471	Kryptolebias_marmoratus
ENSPNYG00000001047	-	100	54.267	ENSLBEG00000028046	-	95	52.181	Labrus_bergylta
ENSPNYG00000001047	-	60	38.482	ENSLBEG00000017203	-	59	37.333	Labrus_bergylta
ENSPNYG00000001047	-	60	38.814	ENSLBEG00000021088	-	58	37.736	Labrus_bergylta
ENSPNYG00000001047	-	75	38.971	ENSLACG00000004602	-	51	54.299	Latimeria_chalumnae
ENSPNYG00000001047	-	84	44.722	ENSLOCG00000001861	-	58	48.921	Lepisosteus_oculatus
ENSPNYG00000001047	-	70	40.323	ENSMAMG00000000111	si:dkey-33c12.4	61	41.262	Mastacembelus_armatus
ENSPNYG00000001047	-	99	57.120	ENSMAMG00000004311	-	99	54.140	Mastacembelus_armatus
ENSPNYG00000001047	-	57	42.975	ENSMZEG00005014276	si:dkey-33c12.4	61	40.048	Maylandia_zebra
ENSPNYG00000001047	-	51	36.923	ENSMZEG00005014740	-	64	36.923	Maylandia_zebra
ENSPNYG00000001047	-	100	99.343	ENSMZEG00005000585	-	100	99.343	Maylandia_zebra
ENSPNYG00000001047	-	76	37.292	ENSMALG00000002265	si:dkey-33c12.4	74	36.895	Monopterus_albus
ENSPNYG00000001047	-	100	61.014	ENSMALG00000003167	-	95	61.014	Monopterus_albus
ENSPNYG00000001047	-	100	94.146	ENSONIG00000007538	-	96	97.183	Oreochromis_niloticus
ENSPNYG00000001047	-	99	58.333	ENSORLG00000030385	-	95	57.372	Oryzias_latipes
ENSPNYG00000001047	-	75	34.259	ENSORLG00000007675	zgc:123010	51	42.614	Oryzias_latipes
ENSPNYG00000001047	-	75	34.259	ENSORLG00020003457	zgc:123010	54	40.838	Oryzias_latipes_hni
ENSPNYG00000001047	-	99	58.173	ENSORLG00015008400	-	95	57.051	Oryzias_latipes_hsok
ENSPNYG00000001047	-	76	33.333	ENSORLG00015008373	zgc:123010	50	40.314	Oryzias_latipes_hsok
ENSPNYG00000001047	-	99	57.870	ENSOMEG00000009428	-	95	57.234	Oryzias_melastigma
ENSPNYG00000001047	-	67	33.439	ENSOMEG00000003408	zgc:123010	50	39.267	Oryzias_melastigma
ENSPNYG00000001047	-	63	30.311	ENSPKIG00000015521	zgc:123010	59	38.158	Paramormyrops_kingsleyae
ENSPNYG00000001047	-	83	45.401	ENSPKIG00000011819	-	57	48.175	Paramormyrops_kingsleyae
ENSPNYG00000001047	-	77	64.211	ENSPFOG00000017092	-	96	63.158	Poecilia_formosa
ENSPNYG00000001047	-	99	59.680	ENSPMEG00000009905	-	97	59.680	Poecilia_mexicana
ENSPNYG00000001047	-	99	60.160	ENSPREG00000016861	-	97	59.680	Poecilia_reticulata
ENSPNYG00000001047	-	66	47.619	ENSPNAG00000018386	si:dkey-33c12.4	78	43.503	Pygocentrus_nattereri
ENSPNYG00000001047	-	61	36.154	ENSPNAG00000007579	zgc:123010	72	33.540	Pygocentrus_nattereri
ENSPNYG00000001047	-	65	47.487	ENSSFOG00015005186	-	57	48.750	Scleropages_formosus
ENSPNYG00000001047	-	76	42.857	ENSSFOG00015009199	-	61	45.521	Scleropages_formosus
ENSPNYG00000001047	-	99	60.640	ENSSMAG00000010960	-	95	58.909	Scophthalmus_maximus
ENSPNYG00000001047	-	85	36.197	ENSSMAG00000008147	si:dkey-33c12.4	55	40.256	Scophthalmus_maximus
ENSPNYG00000001047	-	85	31.078	ENSSMAG00000002904	zgc:123010	76	35.484	Scophthalmus_maximus
ENSPNYG00000001047	-	66	42.105	ENSSDUG00000003213	si:dkey-33c12.4	64	41.404	Seriola_dumerili
ENSPNYG00000001047	-	99	64.696	ENSSDUG00000010976	-	99	64.377	Seriola_dumerili
ENSPNYG00000001047	-	96	65.017	ENSSLDG00000012846	-	99	64.356	Seriola_lalandi_dorsalis
ENSPNYG00000001047	-	66	42.105	ENSSLDG00000009448	si:dkey-33c12.4	60	41.404	Seriola_lalandi_dorsalis
ENSPNYG00000001047	-	61	42.487	ENSSPAG00000022577	-	59	40.811	Stegastes_partitus
ENSPNYG00000001047	-	100	64.070	ENSSPAG00000004843	-	95	64.070	Stegastes_partitus
ENSPNYG00000001047	-	56	40.000	ENSTRUG00000022374	si:dkey-33c12.4	53	39.011	Takifugu_rubripes
ENSPNYG00000001047	-	99	44.065	ENSTRUG00000000057	-	95	41.290	Takifugu_rubripes
ENSPNYG00000001047	-	66	34.568	ENSXMAG00000002598	zgc:123010	52	41.758	Xiphophorus_maculatus