EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000001765 (Gene tree)
Gene ID: 102216128
Gene Symbol: xrn2
Alias: wu:fb38g12|wu:fj53d06|zgc:55717
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 32060 bases
Position: chrJH419253.1:952275-984334
Accession: 102216128
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000002390	XRN_N	PF03159.18	1.4e-101	1	1
ENSPNYP00000002405	XRN_N	PF03159.18	9.4e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000002454	-	2649	XM_013910773	ENSPNYP00000002390	882 (aa)	XP_013766227	-
ENSPNYT00000002468	-	1605	-	ENSPNYP00000002405	534 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000001765's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000001765's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000001765	xrn2	97	73.757	ENSG00000088930	XRN2	90	73.757	Homo_sapiens
ENSPNYG00000001765	xrn2	98	88.555	ENSAPOG00000009818	xrn2	89	88.555	Acanthochromis_polyacanthus
ENSPNYG00000001765	xrn2	97	73.757	ENSAMEG00000012581	XRN2	90	73.757	Ailuropoda_melanoleuca
ENSPNYG00000001765	xrn2	98	85.185	ENSACIG00000015047	xrn2	95	89.060	Amphilophus_citrinellus
ENSPNYG00000001765	xrn2	98	89.249	ENSAOCG00000023632	xrn2	89	89.249	Amphiprion_ocellaris
ENSPNYG00000001765	xrn2	98	89.133	ENSAPEG00000014871	xrn2	89	89.133	Amphiprion_percula
ENSPNYG00000001765	xrn2	98	87.903	ENSATEG00000001273	xrn2	90	87.903	Anabas_testudineus
ENSPNYG00000001765	xrn2	94	72.619	ENSAPLG00000013869	XRN2	90	72.619	Anas_platyrhynchos
ENSPNYG00000001765	xrn2	96	73.757	ENSACAG00000005565	XRN2	89	73.757	Anolis_carolinensis
ENSPNYG00000001765	xrn2	97	73.757	ENSANAG00000020126	XRN2	90	73.757	Aotus_nancymaae
ENSPNYG00000001765	xrn2	100	99.887	ENSACLG00000010522	xrn2	100	99.887	Astatotilapia_calliptera
ENSPNYG00000001765	xrn2	98	81.285	ENSAMXG00000018301	xrn2	92	81.285	Astyanax_mexicanus
ENSPNYG00000001765	xrn2	97	73.210	ENSBTAG00000011304	XRN2	90	73.210	Bos_taurus
ENSPNYG00000001765	xrn2	98	51.254	WBGene00006964	xrn-2	88	53.580	Caenorhabditis_elegans
ENSPNYG00000001765	xrn2	97	73.526	ENSCJAG00000005611	XRN2	90	73.526	Callithrix_jacchus
ENSPNYG00000001765	xrn2	97	73.642	ENSCAFG00000005185	XRN2	90	73.642	Canis_familiaris
ENSPNYG00000001765	xrn2	97	73.642	ENSCAFG00020027479	XRN2	90	73.642	Canis_lupus_dingo
ENSPNYG00000001765	xrn2	97	72.864	ENSCHIG00000006921	XRN2	90	72.864	Capra_hircus
ENSPNYG00000001765	xrn2	97	73.526	ENSTSYG00000008315	XRN2	90	73.526	Carlito_syrichta
ENSPNYG00000001765	xrn2	97	61.894	ENSCAPG00000010773	XRN2	91	60.855	Cavia_aperea
ENSPNYG00000001765	xrn2	97	74.596	ENSCPOG00000009407	XRN2	90	74.596	Cavia_porcellus
ENSPNYG00000001765	xrn2	97	73.642	ENSCATG00000040350	XRN2	91	73.642	Cercocebus_atys
ENSPNYG00000001765	xrn2	97	73.988	ENSCLAG00000013419	XRN2	90	73.988	Chinchilla_lanigera
ENSPNYG00000001765	xrn2	97	73.642	ENSCSAG00000011094	XRN2	90	73.642	Chlorocebus_sabaeus
ENSPNYG00000001765	xrn2	66	88.172	ENSCHOG00000013404	XRN2	63	88.172	Choloepus_hoffmanni
ENSPNYG00000001765	xrn2	97	73.908	ENSCPBG00000023533	XRN2	90	74.023	Chrysemys_picta_bellii
ENSPNYG00000001765	xrn2	91	61.144	ENSCING00000022336	-	100	59.408	Ciona_intestinalis
ENSPNYG00000001765	xrn2	98	56.648	ENSCSAVG00000011217	-	93	67.470	Ciona_savignyi
ENSPNYG00000001765	xrn2	97	73.642	ENSCANG00000040240	XRN2	90	73.642	Colobus_angolensis_palliatus
ENSPNYG00000001765	xrn2	97	74.365	ENSCGRG00001010676	Xrn2	92	74.480	Cricetulus_griseus_chok1gshd
ENSPNYG00000001765	xrn2	94	73.127	ENSCGRG00000006378	Xrn2	89	73.246	Cricetulus_griseus_crigri
ENSPNYG00000001765	xrn2	94	74.225	ENSCSEG00000005628	xrn2	100	76.834	Cynoglossus_semilaevis
ENSPNYG00000001765	xrn2	98	84.091	ENSCVAG00000018999	xrn2	98	88.337	Cyprinodon_variegatus
ENSPNYG00000001765	xrn2	96	82.204	ENSDARG00000101900	xrn2	96	83.939	Danio_rerio
ENSPNYG00000001765	xrn2	97	73.526	ENSDNOG00000001895	XRN2	90	73.526	Dasypus_novemcinctus
ENSPNYG00000001765	xrn2	97	72.139	ENSDORG00000005434	Xrn2	90	72.139	Dipodomys_ordii
ENSPNYG00000001765	xrn2	93	53.118	FBgn0031868	Rat1	92	52.511	Drosophila_melanogaster
ENSPNYG00000001765	xrn2	87	77.129	ENSETEG00000001740	XRN2	82	77.129	Echinops_telfairi
ENSPNYG00000001765	xrn2	99	64.991	ENSEBUG00000016136	xrn2	100	67.883	Eptatretus_burgeri
ENSPNYG00000001765	xrn2	97	74.246	ENSEASG00005002484	XRN2	90	74.246	Equus_asinus_asinus
ENSPNYG00000001765	xrn2	91	92.308	ENSECAG00000018988	XRN2	86	92.308	Equus_caballus
ENSPNYG00000001765	xrn2	72	96.000	ENSEEUG00000009265	XRN2	67	96.000	Erinaceus_europaeus
ENSPNYG00000001765	xrn2	98	81.725	ENSELUG00000000552	xrn2	90	81.725	Esox_lucius
ENSPNYG00000001765	xrn2	97	73.526	ENSFCAG00000007970	XRN2	90	73.526	Felis_catus
ENSPNYG00000001765	xrn2	97	73.148	ENSFALG00000004508	XRN2	90	73.148	Ficedula_albicollis
ENSPNYG00000001765	xrn2	97	73.642	ENSFDAG00000016311	XRN2	90	73.642	Fukomys_damarensis
ENSPNYG00000001765	xrn2	94	79.497	ENSFHEG00000013039	xrn2	98	79.885	Fundulus_heteroclitus
ENSPNYG00000001765	xrn2	93	78.193	ENSGMOG00000013436	xrn2	100	78.313	Gadus_morhua
ENSPNYG00000001765	xrn2	97	72.569	ENSGALG00000008372	XRN2	90	72.569	Gallus_gallus
ENSPNYG00000001765	xrn2	98	85.780	ENSGAFG00000014284	xrn2	99	85.780	Gambusia_affinis
ENSPNYG00000001765	xrn2	94	81.431	ENSGACG00000011870	xrn2	100	81.026	Gasterosteus_aculeatus
ENSPNYG00000001765	xrn2	97	74.078	ENSGAGG00000004884	XRN2	90	73.908	Gopherus_agassizii
ENSPNYG00000001765	xrn2	97	73.642	ENSGGOG00000013738	XRN2	90	73.642	Gorilla_gorilla
ENSPNYG00000001765	xrn2	100	96.475	ENSHBUG00000005077	xrn2	100	96.475	Haplochromis_burtoni
ENSPNYG00000001765	xrn2	97	73.095	ENSHGLG00000014831	XRN2	90	73.095	Heterocephalus_glaber_female
ENSPNYG00000001765	xrn2	97	73.095	ENSHGLG00100013130	XRN2	90	73.095	Heterocephalus_glaber_male
ENSPNYG00000001765	xrn2	98	84.083	ENSHCOG00000011994	xrn2	96	80.432	Hippocampus_comes
ENSPNYG00000001765	xrn2	96	80.641	ENSIPUG00000006639	xrn2	90	80.641	Ictalurus_punctatus
ENSPNYG00000001765	xrn2	97	73.642	ENSSTOG00000000589	XRN2	90	73.642	Ictidomys_tridecemlineatus
ENSPNYG00000001765	xrn2	97	74.451	ENSJJAG00000022128	Xrn2	90	74.451	Jaculus_jaculus
ENSPNYG00000001765	xrn2	94	82.012	ENSLBEG00000010041	xrn2	100	85.328	Labrus_bergylta
ENSPNYG00000001765	xrn2	93	74.910	ENSLACG00000008307	XRN2	98	75.061	Latimeria_chalumnae
ENSPNYG00000001765	xrn2	96	76.588	ENSLOCG00000016874	xrn2	93	78.715	Lepisosteus_oculatus
ENSPNYG00000001765	xrn2	97	73.788	ENSLAFG00000014624	XRN2	90	73.788	Loxodonta_africana
ENSPNYG00000001765	xrn2	97	73.642	ENSMFAG00000038122	XRN2	90	73.642	Macaca_fascicularis
ENSPNYG00000001765	xrn2	97	73.642	ENSMMUG00000011405	XRN2	90	73.642	Macaca_mulatta
ENSPNYG00000001765	xrn2	97	73.526	ENSMNEG00000040626	XRN2	90	73.526	Macaca_nemestrina
ENSPNYG00000001765	xrn2	97	73.526	ENSMLEG00000041897	XRN2	90	73.526	Mandrillus_leucophaeus
ENSPNYG00000001765	xrn2	98	88.249	ENSMAMG00000008633	xrn2	90	88.249	Mastacembelus_armatus
ENSPNYG00000001765	xrn2	100	97.632	ENSMZEG00005022362	xrn2	100	97.632	Maylandia_zebra
ENSPNYG00000001765	xrn2	97	72.120	ENSMGAG00000003196	XRN2	90	72.120	Meleagris_gallopavo
ENSPNYG00000001765	xrn2	97	74.480	ENSMAUG00000021842	Xrn2	90	74.365	Mesocricetus_auratus
ENSPNYG00000001765	xrn2	97	73.757	ENSMICG00000008126	XRN2	90	73.757	Microcebus_murinus
ENSPNYG00000001765	xrn2	97	73.642	ENSMOCG00000012588	Xrn2	90	73.642	Microtus_ochrogaster
ENSPNYG00000001765	xrn2	98	85.374	ENSMMOG00000017576	xrn2	98	85.264	Mola_mola
ENSPNYG00000001765	xrn2	98	72.945	ENSMODG00000006163	XRN2	91	72.945	Monodelphis_domestica
ENSPNYG00000001765	xrn2	98	85.877	ENSMALG00000011355	xrn2	99	85.118	Monopterus_albus
ENSPNYG00000001765	xrn2	97	73.873	MGP_CAROLIEiJ_G0024400	Xrn2	90	73.873	Mus_caroli
ENSPNYG00000001765	xrn2	97	74.018	ENSMUSG00000027433	Xrn2	90	74.018	Mus_musculus
ENSPNYG00000001765	xrn2	97	73.903	MGP_PahariEiJ_G0025843	Xrn2	90	73.903	Mus_pahari
ENSPNYG00000001765	xrn2	97	74.018	MGP_SPRETEiJ_G0025318	Xrn2	94	88.119	Mus_spretus
ENSPNYG00000001765	xrn2	97	72.222	ENSMPUG00000001198	XRN2	84	72.222	Mustela_putorius_furo
ENSPNYG00000001765	xrn2	97	73.843	ENSMLUG00000001536	XRN2	90	73.843	Myotis_lucifugus
ENSPNYG00000001765	xrn2	97	74.596	ENSNGAG00000018138	Xrn2	90	74.596	Nannospalax_galili
ENSPNYG00000001765	xrn2	100	97.294	ENSNBRG00000008062	xrn2	100	97.294	Neolamprologus_brichardi
ENSPNYG00000001765	xrn2	97	73.757	ENSNLEG00000009991	XRN2	90	73.757	Nomascus_leucogenys
ENSPNYG00000001765	xrn2	55	93.333	ENSMEUG00000008622	-	53	93.333	Notamacropus_eugenii
ENSPNYG00000001765	xrn2	66	72.105	ENSOPRG00000001397	-	63	72.105	Ochotona_princeps
ENSPNYG00000001765	xrn2	97	73.642	ENSODEG00000010745	-	90	73.642	Octodon_degus
ENSPNYG00000001765	xrn2	95	68.009	ENSODEG00000000860	-	91	67.654	Octodon_degus
ENSPNYG00000001765	xrn2	98	95.607	ENSONIG00000018720	xrn2	91	92.264	Oreochromis_niloticus
ENSPNYG00000001765	xrn2	97	73.642	ENSOANG00000015673	XRN2	90	73.642	Ornithorhynchus_anatinus
ENSPNYG00000001765	xrn2	97	74.104	ENSOCUG00000013468	XRN2	90	74.104	Oryctolagus_cuniculus
ENSPNYG00000001765	xrn2	98	86.290	ENSORLG00000017213	xrn2	98	85.829	Oryzias_latipes
ENSPNYG00000001765	xrn2	98	86.290	ENSORLG00020001824	xrn2	90	86.290	Oryzias_latipes_hni
ENSPNYG00000001765	xrn2	98	85.829	ENSORLG00015019747	xrn2	90	85.829	Oryzias_latipes_hsok
ENSPNYG00000001765	xrn2	98	85.714	ENSOMEG00000019820	xrn2	89	85.714	Oryzias_melastigma
ENSPNYG00000001765	xrn2	97	73.873	ENSOGAG00000001068	XRN2	90	73.873	Otolemur_garnettii
ENSPNYG00000001765	xrn2	94	72.262	ENSOARG00000004443	XRN2	90	72.262	Ovis_aries
ENSPNYG00000001765	xrn2	97	73.642	ENSPPAG00000033549	XRN2	90	73.642	Pan_paniscus
ENSPNYG00000001765	xrn2	97	73.526	ENSPPRG00000008732	XRN2	90	73.526	Panthera_pardus
ENSPNYG00000001765	xrn2	94	72.944	ENSPTIG00000015683	XRN2	87	72.944	Panthera_tigris_altaica
ENSPNYG00000001765	xrn2	97	73.642	ENSPTRG00000013308	XRN2	90	73.642	Pan_troglodytes
ENSPNYG00000001765	xrn2	97	73.642	ENSPANG00000018088	XRN2	90	73.642	Papio_anubis
ENSPNYG00000001765	xrn2	97	79.745	ENSPKIG00000016889	xrn2	89	79.745	Paramormyrops_kingsleyae
ENSPNYG00000001765	xrn2	87	74.550	ENSPSIG00000014666	XRN2	100	74.550	Pelodiscus_sinensis
ENSPNYG00000001765	xrn2	97	74.018	ENSPEMG00000000111	Xrn2	90	74.018	Peromyscus_maniculatus_bairdii
ENSPNYG00000001765	xrn2	59	63.127	ENSPMAG00000002576	xrn2	99	68.437	Petromyzon_marinus
ENSPNYG00000001765	xrn2	98	85.270	ENSPFOG00000004182	xrn2	90	85.270	Poecilia_formosa
ENSPNYG00000001765	xrn2	98	85.436	ENSPLAG00000007351	xrn2	98	85.436	Poecilia_latipinna
ENSPNYG00000001765	xrn2	91	84.540	ENSPMEG00000011798	xrn2	89	84.540	Poecilia_mexicana
ENSPNYG00000001765	xrn2	98	85.253	ENSPREG00000012452	xrn2	97	85.253	Poecilia_reticulata
ENSPNYG00000001765	xrn2	97	73.410	ENSPPYG00000010755	XRN2	90	73.410	Pongo_abelii
ENSPNYG00000001765	xrn2	97	69.470	ENSPCAG00000011191	XRN2	90	69.470	Procavia_capensis
ENSPNYG00000001765	xrn2	97	67.052	ENSPCOG00000016468	XRN2	89	67.052	Propithecus_coquereli
ENSPNYG00000001765	xrn2	89	63.675	ENSPVAG00000004596	XRN2	83	63.675	Pteropus_vampyrus
ENSPNYG00000001765	xrn2	98	79.438	ENSPNAG00000010956	xrn2	91	79.438	Pygocentrus_nattereri
ENSPNYG00000001765	xrn2	97	74.596	ENSRNOG00000011785	Xrn2	90	74.596	Rattus_norvegicus
ENSPNYG00000001765	xrn2	93	75.362	ENSRBIG00000036193	XRN2	100	75.362	Rhinopithecus_bieti
ENSPNYG00000001765	xrn2	97	73.642	ENSRROG00000044400	XRN2	81	73.642	Rhinopithecus_roxellana
ENSPNYG00000001765	xrn2	80	48.366	YOR048C	RAT1	59	52.415	Saccharomyces_cerevisiae
ENSPNYG00000001765	xrn2	97	73.757	ENSSBOG00000021014	XRN2	90	73.757	Saimiri_boliviensis_boliviensis
ENSPNYG00000001765	xrn2	97	81.787	ENSSFOG00015001091	xrn2	90	81.787	Scleropages_formosus
ENSPNYG00000001765	xrn2	98	86.836	ENSSMAG00000007834	xrn2	88	86.836	Scophthalmus_maximus
ENSPNYG00000001765	xrn2	98	85.698	ENSSDUG00000012802	xrn2	100	85.601	Seriola_dumerili
ENSPNYG00000001765	xrn2	98	88.364	ENSSLDG00000021273	xrn2	98	88.364	Seriola_lalandi_dorsalis
ENSPNYG00000001765	xrn2	68	96.000	ENSSARG00000005859	-	62	96.000	Sorex_araneus
ENSPNYG00000001765	xrn2	97	71.724	ENSSPUG00000005485	XRN2	89	71.724	Sphenodon_punctatus
ENSPNYG00000001765	xrn2	98	89.133	ENSSPAG00000016027	xrn2	89	89.133	Stegastes_partitus
ENSPNYG00000001765	xrn2	97	72.254	ENSSSCG00000007109	XRN2	90	72.254	Sus_scrofa
ENSPNYG00000001765	xrn2	97	71.889	ENSTGUG00000007535	XRN2	90	71.889	Taeniopygia_guttata
ENSPNYG00000001765	xrn2	98	85.270	ENSTRUG00000015489	xrn2	88	85.270	Takifugu_rubripes
ENSPNYG00000001765	xrn2	98	84.041	ENSTNIG00000010712	xrn2	90	84.041	Tetraodon_nigroviridis
ENSPNYG00000001765	xrn2	97	73.757	ENSTBEG00000004119	XRN2	90	73.757	Tupaia_belangeri
ENSPNYG00000001765	xrn2	90	75.398	ENSTTRG00000009087	XRN2	83	75.398	Tursiops_truncatus
ENSPNYG00000001765	xrn2	97	73.873	ENSUAMG00000024634	XRN2	93	72.370	Ursus_americanus
ENSPNYG00000001765	xrn2	94	73.063	ENSUMAG00000004012	XRN2	85	73.063	Ursus_maritimus
ENSPNYG00000001765	xrn2	85	67.678	ENSVPAG00000010694	XRN2	81	67.678	Vicugna_pacos
ENSPNYG00000001765	xrn2	97	73.642	ENSVVUG00000012178	XRN2	90	73.642	Vulpes_vulpes
ENSPNYG00000001765	xrn2	96	75.995	ENSXETG00000023501	xrn2	90	75.995	Xenopus_tropicalis
ENSPNYG00000001765	xrn2	98	85.616	ENSXMAG00000000242	xrn2	92	84.672	Xiphophorus_maculatus