EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000001938 (Gene tree)
Gene ID: 106455937
Gene Symbol: prdm14
Alias: fc16b12|wu:fc16b12
Full Name: PR/SET domain 14
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 3952 bases
Position: chrJH419212.1:4238910-4242861
Accession: 106455937
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000002494	zf-C2H2	PF00096.26	5.7e-21	1	2
ENSPNYP00000002494	zf-C2H2	PF00096.26	5.7e-21	2	2
ENSPNYP00000002494	zf-met	PF12874.7	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000002559	-	1803	XM_013915617	ENSPNYP00000002494	600 (aa)	XP_013771071	UPI0006AAA885

Gene Model

Click here to download ENSPNYG00000001938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000001938's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000001938	prdm14	52	37.278	ENSPNYG00000012194	prdm5	95	37.278
ENSPNYG00000001938	prdm14	55	38.662	ENSPNYG00000013589	-	74	35.962
ENSPNYG00000001938	prdm14	57	34.074	ENSPNYG00000022279	PRDM15	63	34.074
ENSPNYG00000001938	prdm14	55	36.226	ENSPNYG00000009607	prdm12b	69	36.594

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000001938	prdm14	100	82.843	ENSACIG00000022698	prdm14	100	85.784	Amphilophus_citrinellus
ENSPNYG00000001938	prdm14	100	87.908	ENSACLG00000025407	prdm14	100	92.308	Astatotilapia_calliptera
ENSPNYG00000001938	prdm14	63	72.944	ENSAMXG00000000512	prdm14	90	66.287	Astyanax_mexicanus
ENSPNYG00000001938	prdm14	89	51.779	ENSBTAG00000000060	PRDM14	67	66.142	Bos_taurus
ENSPNYG00000001938	prdm14	63	65.274	ENSCHIG00000009297	PRDM14	67	65.274	Capra_hircus
ENSPNYG00000001938	prdm14	69	62.802	ENSTSYG00000010610	PRDM14	91	67.021	Carlito_syrichta
ENSPNYG00000001938	prdm14	62	64.987	ENSCPOG00000027176	PRDM14	73	64.987	Cavia_porcellus
ENSPNYG00000001938	prdm14	63	56.878	ENSCCAG00000026032	PRDM14	64	58.995	Cebus_capucinus
ENSPNYG00000001938	prdm14	91	49.652	ENSCLAG00000001937	PRDM14	99	49.738	Chinchilla_lanigera
ENSPNYG00000001938	prdm14	83	72.167	ENSGACG00000002829	prdm14	100	70.891	Gasterosteus_aculeatus
ENSPNYG00000001938	prdm14	100	99.000	ENSHBUG00000019660	prdm14	100	99.000	Haplochromis_burtoni
ENSPNYG00000001938	prdm14	100	99.002	ENSMZEG00005021597	prdm14	100	99.002	Maylandia_zebra
ENSPNYG00000001938	prdm14	100	98.003	ENSNBRG00000023669	prdm14	100	98.003	Neolamprologus_brichardi
ENSPNYG00000001938	prdm14	86	51.103	ENSODEG00000003245	PRDM14	95	50.185	Octodon_degus
ENSPNYG00000001938	prdm14	63	65.535	ENSOARG00000003528	PRDM14	77	65.535	Ovis_aries
ENSPNYG00000001938	prdm14	100	84.768	ENSSDUG00000013311	prdm14	100	84.437	Seriola_dumerili
ENSPNYG00000001938	prdm14	100	84.934	ENSSLDG00000006506	prdm14	100	84.603	Seriola_lalandi_dorsalis
ENSPNYG00000001938	prdm14	62	86.898	ENSTNIG00000008194	prdm14	99	86.898	Tetraodon_nigroviridis