EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000001939 (Gene tree)
Gene ID: 102199484
Gene Symbol: prpf6
Alias: c20orf14|fc12b02|wu:fa05f07|wu:fc12b02|zgc:65913
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 13035 bases
Position: chrJH419305.1:930644-943678
Accession: 102199484
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000002511	PRP1_N	PF06424.12	1.4e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000002577	-	2679	XM_013912755	ENSPNYP00000002511	892 (aa)	XP_013768209	UPI0003AF90A4

Gene Model

Click here to download ENSPNYG00000001939's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000001939's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000001939	prpf6	96	80.765	ENSG00000101161	PRPF6	100	75.478	Homo_sapiens
ENSPNYG00000001939	prpf6	100	84.497	ENSAPOG00000010395	prpf6	100	84.497	Acanthochromis_polyacanthus
ENSPNYG00000001939	prpf6	70	89.888	ENSAMEG00000001916	PRPF6	99	74.973	Ailuropoda_melanoleuca
ENSPNYG00000001939	prpf6	100	84.908	ENSACIG00000019862	prpf6	100	84.908	Amphilophus_citrinellus
ENSPNYG00000001939	prpf6	100	84.600	ENSAOCG00000012988	prpf6	100	84.600	Amphiprion_ocellaris
ENSPNYG00000001939	prpf6	96	79.892	ENSAPEG00000008301	prpf6	100	73.899	Amphiprion_percula
ENSPNYG00000001939	prpf6	100	83.881	ENSATEG00000005581	prpf6	100	83.881	Anabas_testudineus
ENSPNYG00000001939	prpf6	96	81.296	ENSACAG00000006464	PRPF6	95	76.008	Anolis_carolinensis
ENSPNYG00000001939	prpf6	96	80.765	ENSANAG00000012661	PRPF6	100	75.478	Aotus_nancymaae
ENSPNYG00000001939	prpf6	100	85.934	ENSACLG00000025875	prpf6	100	85.934	Astatotilapia_calliptera
ENSPNYG00000001939	prpf6	96	83.051	ENSAMXG00000001929	prpf6	100	75.640	Astyanax_mexicanus
ENSPNYG00000001939	prpf6	96	81.190	ENSBTAG00000011656	PRPF6	100	75.902	Bos_taurus
ENSPNYG00000001939	prpf6	96	80.765	ENSCJAG00000010616	PRPF6	100	75.478	Callithrix_jacchus
ENSPNYG00000001939	prpf6	96	81.296	ENSCAFG00000013165	PRPF6	100	76.008	Canis_familiaris
ENSPNYG00000001939	prpf6	96	81.296	ENSCAFG00020002050	PRPF6	100	76.008	Canis_lupus_dingo
ENSPNYG00000001939	prpf6	96	81.190	ENSCHIG00000018187	PRPF6	100	75.902	Capra_hircus
ENSPNYG00000001939	prpf6	96	81.190	ENSTSYG00000007814	PRPF6	100	75.902	Carlito_syrichta
ENSPNYG00000001939	prpf6	93	73.391	ENSCAPG00000015077	PRPF6	100	74.183	Cavia_aperea
ENSPNYG00000001939	prpf6	70	90.048	ENSCPOG00000007518	PRPF6	100	76.327	Cavia_porcellus
ENSPNYG00000001939	prpf6	70	84.430	ENSCCAG00000024564	PRPF6	100	84.430	Cebus_capucinus
ENSPNYG00000001939	prpf6	96	80.871	ENSCATG00000037473	PRPF6	100	75.584	Cercocebus_atys
ENSPNYG00000001939	prpf6	96	78.108	ENSCLAG00000003854	PRPF6	100	72.824	Chinchilla_lanigera
ENSPNYG00000001939	prpf6	96	76.241	ENSCSAG00000016742	PRPF6	100	70.992	Chlorocebus_sabaeus
ENSPNYG00000001939	prpf6	74	94.048	ENSCHOG00000003315	-	76	94.595	Choloepus_hoffmanni
ENSPNYG00000001939	prpf6	98	89.888	ENSCPBG00000013964	PRPF6	96	76.302	Chrysemys_picta_bellii
ENSPNYG00000001939	prpf6	95	62.896	ENSCING00000008817	-	99	57.911	Ciona_intestinalis
ENSPNYG00000001939	prpf6	96	80.659	ENSCANG00000038230	PRPF6	100	75.372	Colobus_angolensis_palliatus
ENSPNYG00000001939	prpf6	96	81.615	ENSCGRG00001022666	Prpf6	100	76.327	Cricetulus_griseus_chok1gshd
ENSPNYG00000001939	prpf6	96	84.372	ENSCSEG00000018561	prpf6	100	79.607	Cynoglossus_semilaevis
ENSPNYG00000001939	prpf6	100	82.957	ENSCVAG00000010550	prpf6	100	82.957	Cyprinodon_variegatus
ENSPNYG00000001939	prpf6	100	81.557	ENSDARG00000091367	prpf6	100	76.614	Danio_rerio
ENSPNYG00000001939	prpf6	96	80.871	ENSDNOG00000040544	PRPF6	100	75.690	Dasypus_novemcinctus
ENSPNYG00000001939	prpf6	78	80.444	ENSDORG00000005406	Prpf6	100	74.329	Dipodomys_ordii
ENSPNYG00000001939	prpf6	69	71.244	FBgn0036828	CG6841	66	71.244	Drosophila_melanogaster
ENSPNYG00000001939	prpf6	83	88.235	ENSETEG00000004447	PRPF6	81	88.122	Echinops_telfairi
ENSPNYG00000001939	prpf6	96	75.450	ENSEBUG00000008835	prpf6	100	70.296	Eptatretus_burgeri
ENSPNYG00000001939	prpf6	96	80.000	ENSEASG00005023115	PRPF6	100	79.572	Equus_asinus_asinus
ENSPNYG00000001939	prpf6	96	76.939	ENSECAG00000013983	PRPF6	100	71.656	Equus_caballus
ENSPNYG00000001939	prpf6	85	95.833	ENSEEUG00000000180	PRPF6	67	95.833	Erinaceus_europaeus
ENSPNYG00000001939	prpf6	97	83.457	ENSELUG00000001945	prpf6	94	70.961	Esox_lucius
ENSPNYG00000001939	prpf6	70	89.727	ENSFCAG00000001183	PRPF6	100	76.008	Felis_catus
ENSPNYG00000001939	prpf6	70	89.888	ENSFALG00000010326	-	98	76.110	Ficedula_albicollis
ENSPNYG00000001939	prpf6	70	85.072	ENSFALG00000006046	-	97	71.748	Ficedula_albicollis
ENSPNYG00000001939	prpf6	70	90.048	ENSFDAG00000006451	PRPF6	100	74.858	Fukomys_damarensis
ENSPNYG00000001939	prpf6	100	83.470	ENSFHEG00000000560	prpf6	100	83.470	Fundulus_heteroclitus
ENSPNYG00000001939	prpf6	96	81.336	ENSGMOG00000015622	prpf6	99	80.806	Gadus_morhua
ENSPNYG00000001939	prpf6	96	81.509	ENSGALG00000006001	PRPF6	100	76.327	Gallus_gallus
ENSPNYG00000001939	prpf6	100	86.540	ENSGAFG00000021109	prpf6	100	84.963	Gambusia_affinis
ENSPNYG00000001939	prpf6	97	82.521	ENSGACG00000002576	prpf6	100	82.521	Gasterosteus_aculeatus
ENSPNYG00000001939	prpf6	98	90.048	ENSGAGG00000008653	PRPF6	96	76.408	Gopherus_agassizii
ENSPNYG00000001939	prpf6	96	80.765	ENSGGOG00000016876	PRPF6	100	75.478	Gorilla_gorilla
ENSPNYG00000001939	prpf6	100	85.934	ENSHBUG00000004496	prpf6	100	85.934	Haplochromis_burtoni
ENSPNYG00000001939	prpf6	96	78.473	ENSHGLG00000009222	PRPF6	100	76.221	Heterocephalus_glaber_female
ENSPNYG00000001939	prpf6	93	77.280	ENSHGLG00100016600	PRPF6	100	77.280	Heterocephalus_glaber_male
ENSPNYG00000001939	prpf6	100	82.136	ENSHCOG00000011513	prpf6	100	82.136	Hippocampus_comes
ENSPNYG00000001939	prpf6	100	79.571	ENSIPUG00000004912	prpf6	100	79.162	Ictalurus_punctatus
ENSPNYG00000001939	prpf6	96	76.022	ENSSTOG00000002922	PRPF6	100	73.383	Ictidomys_tridecemlineatus
ENSPNYG00000001939	prpf6	70	90.048	ENSJJAG00000000836	Prpf6	100	76.327	Jaculus_jaculus
ENSPNYG00000001939	prpf6	99	84.320	ENSKMAG00000017800	prpf6	100	84.086	Kryptolebias_marmoratus
ENSPNYG00000001939	prpf6	100	83.060	ENSLBEG00000012582	prpf6	100	83.060	Labrus_bergylta
ENSPNYG00000001939	prpf6	98	81.943	ENSLOCG00000004827	prpf6	96	77.802	Lepisosteus_oculatus
ENSPNYG00000001939	prpf6	96	80.871	ENSLAFG00000005272	PRPF6	100	75.584	Loxodonta_africana
ENSPNYG00000001939	prpf6	96	80.659	ENSMFAG00000037542	PRPF6	100	75.372	Macaca_fascicularis
ENSPNYG00000001939	prpf6	96	76.417	ENSMMUG00000015558	PRPF6	100	79.487	Macaca_mulatta
ENSPNYG00000001939	prpf6	96	72.757	ENSMNEG00000045555	PRPF6	100	72.216	Macaca_nemestrina
ENSPNYG00000001939	prpf6	100	85.641	ENSMAMG00000010718	prpf6	100	83.778	Mastacembelus_armatus
ENSPNYG00000001939	prpf6	89	84.091	ENSMZEG00005026539	prpf6	100	80.251	Maylandia_zebra
ENSPNYG00000001939	prpf6	96	85.154	ENSMZEG00005015261	-	100	85.154	Maylandia_zebra
ENSPNYG00000001939	prpf6	78	80.999	ENSMGAG00000006634	PRPF6	100	76.035	Meleagris_gallopavo
ENSPNYG00000001939	prpf6	96	81.615	ENSMAUG00000013969	Prpf6	100	76.327	Mesocricetus_auratus
ENSPNYG00000001939	prpf6	78	80.028	ENSMICG00000017793	PRPF6	98	72.783	Microcebus_murinus
ENSPNYG00000001939	prpf6	96	81.509	ENSMOCG00000001701	Prpf6	100	76.221	Microtus_ochrogaster
ENSPNYG00000001939	prpf6	96	83.316	ENSMMOG00000020419	prpf6	100	83.316	Mola_mola
ENSPNYG00000001939	prpf6	93	80.877	ENSMODG00000017051	PRPF6	99	73.780	Monodelphis_domestica
ENSPNYG00000001939	prpf6	95	83.676	ENSMALG00000000089	prpf6	100	83.676	Monopterus_albus
ENSPNYG00000001939	prpf6	96	84.879	MGP_CAROLIEiJ_G0024814	Prpf6	100	96.296	Mus_caroli
ENSPNYG00000001939	prpf6	96	81.615	ENSMUSG00000002455	Prpf6	100	96.296	Mus_musculus
ENSPNYG00000001939	prpf6	96	81.615	MGP_PahariEiJ_G0026262	Prpf6	100	96.296	Mus_pahari
ENSPNYG00000001939	prpf6	96	81.615	MGP_SPRETEiJ_G0025741	Prpf6	100	96.296	Mus_spretus
ENSPNYG00000001939	prpf6	85	79.830	ENSMPUG00000008673	PRPF6	98	74.272	Mustela_putorius_furo
ENSPNYG00000001939	prpf6	70	90.209	ENSNGAG00000003365	Prpf6	100	76.433	Nannospalax_galili
ENSPNYG00000001939	prpf6	100	85.832	ENSNBRG00000015025	prpf6	100	85.832	Neolamprologus_brichardi
ENSPNYG00000001939	prpf6	96	80.659	ENSNLEG00000010208	PRPF6	100	75.372	Nomascus_leucogenys
ENSPNYG00000001939	prpf6	96	83.735	ENSMEUG00000009824	-	82	83.992	Notamacropus_eugenii
ENSPNYG00000001939	prpf6	70	81.059	ENSODEG00000004841	PRPF6	100	81.059	Octodon_degus
ENSPNYG00000001939	prpf6	100	85.524	ENSONIG00000017406	prpf6	100	85.524	Oreochromis_niloticus
ENSPNYG00000001939	prpf6	70	89.888	ENSOANG00000004920	PRPF6	100	76.221	Ornithorhynchus_anatinus
ENSPNYG00000001939	prpf6	95	79.292	ENSOCUG00000014151	PRPF6	100	73.955	Oryctolagus_cuniculus
ENSPNYG00000001939	prpf6	100	82.752	ENSORLG00000009592	prpf6	100	82.752	Oryzias_latipes
ENSPNYG00000001939	prpf6	100	82.854	ENSORLG00020001458	prpf6	100	82.854	Oryzias_latipes_hni
ENSPNYG00000001939	prpf6	100	82.854	ENSORLG00015018762	prpf6	100	82.854	Oryzias_latipes_hsok
ENSPNYG00000001939	prpf6	100	83.265	ENSOMEG00000012174	prpf6	100	83.265	Oryzias_melastigma
ENSPNYG00000001939	prpf6	96	80.344	ENSOGAG00000007573	PRPF6	100	76.262	Otolemur_garnettii
ENSPNYG00000001939	prpf6	96	80.765	ENSOARG00000008776	PRPF6	99	75.478	Ovis_aries
ENSPNYG00000001939	prpf6	96	80.765	ENSPPAG00000008686	PRPF6	100	75.478	Pan_paniscus
ENSPNYG00000001939	prpf6	70	89.727	ENSPPRG00000008497	PRPF6	100	76.008	Panthera_pardus
ENSPNYG00000001939	prpf6	70	89.727	ENSPTIG00000011184	PRPF6	97	75.490	Panthera_tigris_altaica
ENSPNYG00000001939	prpf6	96	80.765	ENSPTRG00000013765	PRPF6	100	75.478	Pan_troglodytes
ENSPNYG00000001939	prpf6	96	80.446	ENSPANG00000024135	PRPF6	100	75.159	Papio_anubis
ENSPNYG00000001939	prpf6	98	93.098	ENSPKIG00000005627	prpf6	99	76.514	Paramormyrops_kingsleyae
ENSPNYG00000001939	prpf6	78	80.721	ENSPSIG00000007717	PRPF6	100	74.745	Pelodiscus_sinensis
ENSPNYG00000001939	prpf6	70	93.429	ENSPMGG00000008925	prpf6	99	93.429	Periophthalmus_magnuspinnatus
ENSPNYG00000001939	prpf6	96	81.615	ENSPEMG00000016036	Prpf6	100	76.327	Peromyscus_maniculatus_bairdii
ENSPNYG00000001939	prpf6	98	76.803	ENSPMAG00000006144	prpf6	100	74.948	Petromyzon_marinus
ENSPNYG00000001939	prpf6	96	81.615	ENSPCIG00000017909	PRPF6	100	76.327	Phascolarctos_cinereus
ENSPNYG00000001939	prpf6	100	85.378	ENSPFOG00000006431	prpf6	99	80.184	Poecilia_formosa
ENSPNYG00000001939	prpf6	100	83.573	ENSPLAG00000005974	prpf6	100	83.573	Poecilia_latipinna
ENSPNYG00000001939	prpf6	100	83.778	ENSPMEG00000009977	prpf6	100	83.778	Poecilia_mexicana
ENSPNYG00000001939	prpf6	100	83.676	ENSPREG00000017993	prpf6	95	83.676	Poecilia_reticulata
ENSPNYG00000001939	prpf6	96	80.085	ENSPPYG00000011256	PRPF6	100	74.709	Pongo_abelii
ENSPNYG00000001939	prpf6	90	90.265	ENSPCAG00000006536	PRPF6	88	90.265	Procavia_capensis
ENSPNYG00000001939	prpf6	70	89.246	ENSPCOG00000016881	PRPF6	100	75.478	Propithecus_coquereli
ENSPNYG00000001939	prpf6	96	75.133	ENSPVAG00000014316	PRPF6	100	70.064	Pteropus_vampyrus
ENSPNYG00000001939	prpf6	100	81.967	ENSPNAG00000015606	prpf6	100	76.049	Pygocentrus_nattereri
ENSPNYG00000001939	prpf6	96	81.509	ENSRNOG00000051498	Prpf6	100	76.221	Rattus_norvegicus
ENSPNYG00000001939	prpf6	96	80.659	ENSRBIG00000043613	PRPF6	100	75.372	Rhinopithecus_bieti
ENSPNYG00000001939	prpf6	96	77.778	ENSRROG00000040969	PRPF6	100	83.573	Rhinopithecus_roxellana
ENSPNYG00000001939	prpf6	67	89.869	ENSSBOG00000020632	PRPF6	100	57.658	Saimiri_boliviensis_boliviensis
ENSPNYG00000001939	prpf6	96	81.615	ENSSHAG00000016810	PRPF6	100	76.327	Sarcophilus_harrisii
ENSPNYG00000001939	prpf6	95	83.548	ENSSFOG00015020859	prpf6	100	76.907	Scleropages_formosus
ENSPNYG00000001939	prpf6	100	82.341	ENSSMAG00000008112	prpf6	100	82.341	Scophthalmus_maximus
ENSPNYG00000001939	prpf6	100	84.394	ENSSDUG00000016142	prpf6	100	84.394	Seriola_dumerili
ENSPNYG00000001939	prpf6	100	84.394	ENSSLDG00000025283	prpf6	99	84.394	Seriola_lalandi_dorsalis
ENSPNYG00000001939	prpf6	89	79.342	ENSSPUG00000018260	PRPF6	100	73.696	Sphenodon_punctatus
ENSPNYG00000001939	prpf6	100	84.394	ENSSPAG00000015850	prpf6	100	84.394	Stegastes_partitus
ENSPNYG00000001939	prpf6	97	79.895	ENSSSCG00000029119	PRPF6	98	74.394	Sus_scrofa
ENSPNYG00000001939	prpf6	70	90.048	ENSTGUG00000007221	PRPF6	100	76.190	Taeniopygia_guttata
ENSPNYG00000001939	prpf6	100	83.265	ENSTRUG00000002920	prpf6	100	83.265	Takifugu_rubripes
ENSPNYG00000001939	prpf6	96	83.847	ENSTNIG00000017873	prpf6	100	80.871	Tetraodon_nigroviridis
ENSPNYG00000001939	prpf6	88	95.000	ENSTBEG00000005348	PRPF6	85	92.778	Tupaia_belangeri
ENSPNYG00000001939	prpf6	70	89.246	ENSTTRG00000013068	PRPF6	100	75.690	Tursiops_truncatus
ENSPNYG00000001939	prpf6	85	91.259	ENSUMAG00000021631	PRPF6	98	74.074	Ursus_maritimus
ENSPNYG00000001939	prpf6	96	81.296	ENSVVUG00000014948	PRPF6	100	76.008	Vulpes_vulpes
ENSPNYG00000001939	prpf6	96	80.745	ENSXETG00000012054	prpf6	97	75.452	Xenopus_tropicalis
ENSPNYG00000001939	prpf6	100	83.778	ENSXCOG00000008082	prpf6	100	83.778	Xiphophorus_couchianus
ENSPNYG00000001939	prpf6	100	83.676	ENSXMAG00000015581	prpf6	100	83.676	Xiphophorus_maculatus