EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000001944 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: tyrosyl-DNA phosphodiesterase 2-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 3722 bases
Position: chrJH421606.1:793-4514
Accession: 102210138
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000002473	Exo_endo_phos	PF03372.23	6.5e-07	1	1
ENSPNYP00000002489	Exo_endo_phos	PF03372.23	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000002554	-	963	XM_005755753	ENSPNYP00000002489	320 (aa)	XP_005755810	-
ENSPNYT00000002538	-	717	-	ENSPNYP00000002473	238 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000001944's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000001944's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000001944	-	71	71.658	ENSPNYG00000011504	tdp2b	64	71.282

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000001944	-	83	49.282	ENSG00000111802	TDP2	69	49.282	Homo_sapiens
ENSPNYG00000001944	-	69	61.677	ENSAPOG00000018379	-	59	61.677	Acanthochromis_polyacanthus
ENSPNYG00000001944	-	72	51.429	ENSAMEG00000010230	TDP2	64	51.124	Ailuropoda_melanoleuca
ENSPNYG00000001944	-	74	60.000	ENSAOCG00000010081	-	88	55.665	Amphiprion_ocellaris
ENSPNYG00000001944	-	75	56.354	ENSAPEG00000004208	-	62	57.627	Amphiprion_percula
ENSPNYG00000001944	-	73	57.955	ENSATEG00000010663	-	70	50.230	Anabas_testudineus
ENSPNYG00000001944	-	79	48.980	ENSACAG00000002332	TDP2	53	48.980	Anolis_carolinensis
ENSPNYG00000001944	-	71	51.744	ENSANAG00000020033	TDP2	50	51.648	Aotus_nancymaae
ENSPNYG00000001944	-	82	84.772	ENSACLG00000016174	tdp2b	60	95.429	Astatotilapia_calliptera
ENSPNYG00000001944	-	72	94.220	ENSACLG00000016132	tdp2b	62	92.935	Astatotilapia_calliptera
ENSPNYG00000001944	-	79	73.158	ENSACLG00000016148	tdp2b	64	78.090	Astatotilapia_calliptera
ENSPNYG00000001944	-	66	50.000	ENSAMXG00000036549	tdp2a	60	45.355	Astyanax_mexicanus
ENSPNYG00000001944	-	69	49.701	ENSBTAG00000000365	TDP2	50	47.253	Bos_taurus
ENSPNYG00000001944	-	71	51.744	ENSCJAG00000021963	-	50	50.000	Callithrix_jacchus
ENSPNYG00000001944	-	72	52.299	ENSCJAG00000006074	TDP2	59	51.397	Callithrix_jacchus
ENSPNYG00000001944	-	72	50.000	ENSCAFG00000010428	TDP2	61	50.562	Canis_familiaris
ENSPNYG00000001944	-	72	50.000	ENSCAFG00020009994	TDP2	61	50.562	Canis_lupus_dingo
ENSPNYG00000001944	-	85	44.175	ENSCHIG00000015294	-	70	44.175	Capra_hircus
ENSPNYG00000001944	-	69	52.096	ENSTSYG00000037199	TDP2	58	50.562	Carlito_syrichta
ENSPNYG00000001944	-	72	50.867	ENSCPOG00000006390	TDP2	63	44.978	Cavia_porcellus
ENSPNYG00000001944	-	72	52.299	ENSCCAG00000022734	TDP2	59	51.397	Cebus_capucinus
ENSPNYG00000001944	-	83	48.571	ENSCATG00000022076	TDP2	69	48.571	Cercocebus_atys
ENSPNYG00000001944	-	72	51.445	ENSCLAG00000002072	TDP2	63	45.217	Chinchilla_lanigera
ENSPNYG00000001944	-	71	51.744	ENSCSAG00000007769	TDP2	50	50.279	Chlorocebus_sabaeus
ENSPNYG00000001944	-	83	49.519	ENSCANG00000040122	TDP2	69	49.519	Colobus_angolensis_palliatus
ENSPNYG00000001944	-	78	60.000	ENSCVAG00000003114	tdp2b	55	59.296	Cyprinodon_variegatus
ENSPNYG00000001944	-	75	56.354	ENSDARG00000035954	tdp2b	60	47.619	Danio_rerio
ENSPNYG00000001944	-	69	52.695	ENSETEG00000019096	TDP2	60	52.695	Echinops_telfairi
ENSPNYG00000001944	-	81	45.312	ENSELUG00000009321	tdp2a	59	44.271	Esox_lucius
ENSPNYG00000001944	-	67	59.006	ENSELUG00000016449	tdp2b	52	52.551	Esox_lucius
ENSPNYG00000001944	-	72	50.000	ENSFCAG00000025612	TDP2	55	47.264	Felis_catus
ENSPNYG00000001944	-	69	53.892	ENSFALG00000004710	TDP2	57	47.087	Ficedula_albicollis
ENSPNYG00000001944	-	71	52.047	ENSFDAG00000006512	TDP2	62	50.279	Fukomys_damarensis
ENSPNYG00000001944	-	67	60.625	ENSFHEG00000013560	-	62	56.180	Fundulus_heteroclitus
ENSPNYG00000001944	-	68	53.988	ENSGAGG00000002853	TDP2	56	43.913	Gopherus_agassizii
ENSPNYG00000001944	-	83	49.282	ENSGGOG00000014237	TDP2	69	49.282	Gorilla_gorilla
ENSPNYG00000001944	-	73	76.705	ENSHBUG00000005421	-	76	76.374	Haplochromis_burtoni
ENSPNYG00000001944	-	69	53.892	ENSHGLG00000008655	TDP2	62	44.737	Heterocephalus_glaber_female
ENSPNYG00000001944	-	69	53.892	ENSHGLG00100019087	TDP2	62	44.737	Heterocephalus_glaber_male
ENSPNYG00000001944	-	68	59.394	ENSKMAG00000015485	-	53	59.394	Kryptolebias_marmoratus
ENSPNYG00000001944	-	68	50.909	ENSLACG00000008852	TDP2	53	45.876	Latimeria_chalumnae
ENSPNYG00000001944	-	71	52.326	ENSLOCG00000005817	tdp2b	64	51.955	Lepisosteus_oculatus
ENSPNYG00000001944	-	69	51.807	ENSLAFG00000002567	TDP2	50	50.279	Loxodonta_africana
ENSPNYG00000001944	-	83	49.282	ENSMFAG00000045296	TDP2	69	49.282	Macaca_fascicularis
ENSPNYG00000001944	-	71	51.744	ENSMMUG00000009803	TDP2	50	50.279	Macaca_mulatta
ENSPNYG00000001944	-	83	48.804	ENSMNEG00000038003	TDP2	69	48.804	Macaca_nemestrina
ENSPNYG00000001944	-	83	48.804	ENSMLEG00000028883	TDP2	69	48.804	Mandrillus_leucophaeus
ENSPNYG00000001944	-	81	58.586	ENSMAMG00000013654	tdp2b	55	58.794	Mastacembelus_armatus
ENSPNYG00000001944	-	82	76.650	ENSMZEG00005004103	tdp2b	58	86.286	Maylandia_zebra
ENSPNYG00000001944	-	72	79.532	ENSMZEG00005004153	tdp2b	64	78.771	Maylandia_zebra
ENSPNYG00000001944	-	71	94.706	ENSMZEG00005004055	tdp2b	57	94.706	Maylandia_zebra
ENSPNYG00000001944	-	73	78.161	ENSMZEG00005004077	tdp2b	61	77.654	Maylandia_zebra
ENSPNYG00000001944	-	74	94.350	ENSMZEG00005004126	tdp2b	62	93.923	Maylandia_zebra
ENSPNYG00000001944	-	73	92.045	ENSMZEG00005003980	-	60	92.391	Maylandia_zebra
ENSPNYG00000001944	-	68	52.121	ENSMGAG00000008014	TDP2	55	45.813	Meleagris_gallopavo
ENSPNYG00000001944	-	72	50.867	ENSMICG00000000039	TDP2	61	49.444	Microcebus_murinus
ENSPNYG00000001944	-	68	51.515	ENSMODG00000011653	TDP2	66	44.037	Monodelphis_domestica
ENSPNYG00000001944	-	76	56.906	ENSMALG00000005368	-	62	56.906	Monopterus_albus
ENSPNYG00000001944	-	70	50.888	ENSMLUG00000013506	TDP2	65	43.333	Myotis_lucifugus
ENSPNYG00000001944	-	83	49.282	ENSNLEG00000002447	TDP2	67	49.282	Nomascus_leucogenys
ENSPNYG00000001944	-	89	46.948	ENSOPRG00000016299	TDP2	58	46.948	Ochotona_princeps
ENSPNYG00000001944	-	72	50.867	ENSODEG00000014018	TDP2	59	51.163	Octodon_degus
ENSPNYG00000001944	-	71	50.000	ENSOCUG00000013773	TDP2	56	45.320	Oryctolagus_cuniculus
ENSPNYG00000001944	-	69	56.548	ENSORLG00000001661	-	65	54.237	Oryzias_latipes
ENSPNYG00000001944	-	69	56.548	ENSORLG00020004634	-	65	54.237	Oryzias_latipes_hni
ENSPNYG00000001944	-	69	44.578	ENSORLG00015008190	-	61	43.353	Oryzias_latipes_hsok
ENSPNYG00000001944	-	87	48.325	ENSOMEG00000015899	-	61	55.625	Oryzias_melastigma
ENSPNYG00000001944	-	85	47.549	ENSOGAG00000025303	TDP2	55	46.535	Otolemur_garnettii
ENSPNYG00000001944	-	83	48.792	ENSPPAG00000029023	TDP2	69	48.792	Pan_paniscus
ENSPNYG00000001944	-	72	48.276	ENSPPRG00000015398	TDP2	55	46.269	Panthera_pardus
ENSPNYG00000001944	-	72	48.851	ENSPTIG00000018574	TDP2	62	47.778	Panthera_tigris_altaica
ENSPNYG00000001944	-	83	48.804	ENSPTRG00000017778	TDP2	69	48.804	Pan_troglodytes
ENSPNYG00000001944	-	72	51.724	ENSPANG00000017590	TDP2	69	49.282	Papio_anubis
ENSPNYG00000001944	-	68	55.828	ENSPSIG00000004948	TDP2	56	55.828	Pelodiscus_sinensis
ENSPNYG00000001944	-	69	44.048	ENSPMAG00000001570	tdp2b	61	44.048	Petromyzon_marinus
ENSPNYG00000001944	-	71	51.744	ENSPFOG00000017990	-	64	50.847	Poecilia_formosa
ENSPNYG00000001944	-	71	51.163	ENSPLAG00000019439	-	55	51.149	Poecilia_latipinna
ENSPNYG00000001944	-	76	51.913	ENSPMEG00000010824	-	61	51.913	Poecilia_mexicana
ENSPNYG00000001944	-	71	51.163	ENSPCOG00000021415	TDP2	63	49.444	Propithecus_coquereli
ENSPNYG00000001944	-	83	48.341	ENSRBIG00000037119	TDP2	69	48.341	Rhinopithecus_bieti
ENSPNYG00000001944	-	83	48.815	ENSRROG00000005025	TDP2	69	48.815	Rhinopithecus_roxellana
ENSPNYG00000001944	-	71	51.744	ENSSBOG00000028734	TDP2	64	47.692	Saimiri_boliviensis_boliviensis
ENSPNYG00000001944	-	72	49.711	ENSSARG00000013547	TDP2	65	48.901	Sorex_araneus
ENSPNYG00000001944	-	72	49.425	ENSSSCG00000001092	TDP2	56	45.813	Sus_scrofa
ENSPNYG00000001944	-	69	51.497	ENSTGUG00000009035	TDP2	64	51.497	Taeniopygia_guttata
ENSPNYG00000001944	-	66	59.119	ENSTRUG00000012218	-	56	59.119	Takifugu_rubripes
ENSPNYG00000001944	-	72	62.428	ENSTRUG00000014347	tdp2b	57	56.585	Takifugu_rubripes
ENSPNYG00000001944	-	70	58.140	ENSTNIG00000010260	TDP2	67	57.143	Tetraodon_nigroviridis
ENSPNYG00000001944	-	69	52.695	ENSTTRG00000016376	TDP2	62	44.783	Tursiops_truncatus
ENSPNYG00000001944	-	72	51.429	ENSUAMG00000025939	TDP2	51	51.124	Ursus_americanus
ENSPNYG00000001944	-	72	51.429	ENSUMAG00000020111	TDP2	59	51.124	Ursus_maritimus