EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000002059 (Gene tree)
Gene ID: 102201142
Gene Symbol: si:dkey-37o8.1
Alias: fi12b10|wu:fi12b10
Full Name: elongation factor 1-alpha-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 1920 bases
Position: chrJH419292.1:1298288-1300207
Accession: 102201142
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000002631	GTP_EFTU	PF00009.27	1.6e-53	1	1
ENSPNYP00000002631	MMR_HSR1	PF01926.23	1.6e-07	1	1
ENSPNYP00000002631	GTP_EFTU_D2	PF03144.25	1.6e-11	1	1
ENSPNYP00000002631	GTP_EFTU_D3	PF03143.17	1.9e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000002698	-	1371	XM_005738854	ENSPNYP00000002631	456 (aa)	XP_005738911	UPI0003AF2E08

Gene Model

Click here to download ENSPNYG00000002059's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000002059's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000002059	si:dkey-37o8.1	97	71.429	ENSPNYG00000007263	-	95	71.429
ENSPNYG00000002059	si:dkey-37o8.1	88	70.927	ENSPNYG00000007306	-	96	70.927
ENSPNYG00000002059	si:dkey-37o8.1	96	38.462	ENSPNYG00000013360	hbs1l	62	38.462
ENSPNYG00000002059	si:dkey-37o8.1	97	71.106	ENSPNYG00000005593	eef1a1b	96	71.106
ENSPNYG00000002059	si:dkey-37o8.1	95	37.156	ENSPNYG00000002903	-	84	37.241
ENSPNYG00000002059	si:dkey-37o8.1	95	37.471	ENSPNYG00000010474	gspt1l	73	37.471
ENSPNYG00000002059	si:dkey-37o8.1	97	71.783	ENSPNYG00000009404	EEF1A1	96	71.783

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000002059	si:dkey-37o8.1	100	90.570	ENSAPOG00000016459	si:dkey-37o8.1	100	90.570	Acanthochromis_polyacanthus
ENSPNYG00000002059	si:dkey-37o8.1	99	90.487	ENSACIG00000020985	si:dkey-37o8.1	84	90.487	Amphilophus_citrinellus
ENSPNYG00000002059	si:dkey-37o8.1	100	91.904	ENSAOCG00000002663	si:dkey-37o8.1	100	91.904	Amphiprion_ocellaris
ENSPNYG00000002059	si:dkey-37o8.1	100	91.685	ENSAPEG00000012670	si:dkey-37o8.1	100	91.685	Amphiprion_percula
ENSPNYG00000002059	si:dkey-37o8.1	93	92.417	ENSATEG00000002217	si:dkey-37o8.1	99	92.417	Anabas_testudineus
ENSPNYG00000002059	si:dkey-37o8.1	100	99.342	ENSACLG00000003519	si:dkey-37o8.1	100	99.342	Astatotilapia_calliptera
ENSPNYG00000002059	si:dkey-37o8.1	100	83.843	ENSAMXG00000002728	si:dkey-37o8.1	100	83.843	Astyanax_mexicanus
ENSPNYG00000002059	si:dkey-37o8.1	96	75.171	ENSCPBG00000020570	-	87	75.171	Chrysemys_picta_bellii
ENSPNYG00000002059	si:dkey-37o8.1	100	84.716	ENSCSEG00000019807	si:dkey-37o8.1	100	84.017	Cynoglossus_semilaevis
ENSPNYG00000002059	si:dkey-37o8.1	98	88.393	ENSCVAG00000009828	si:dkey-37o8.1	98	88.393	Cyprinodon_variegatus
ENSPNYG00000002059	si:dkey-37o8.1	97	81.941	ENSDARG00000071727	si:dkey-37o8.1	92	81.941	Danio_rerio
ENSPNYG00000002059	si:dkey-37o8.1	100	83.188	ENSELUG00000007495	si:dkey-37o8.1	100	83.188	Esox_lucius
ENSPNYG00000002059	si:dkey-37o8.1	98	89.062	ENSFHEG00000017452	si:dkey-37o8.1	98	89.062	Fundulus_heteroclitus
ENSPNYG00000002059	si:dkey-37o8.1	97	79.684	ENSGMOG00000006122	si:dkey-37o8.1	98	79.684	Gadus_morhua
ENSPNYG00000002059	si:dkey-37o8.1	98	81.696	ENSGAFG00000000367	si:dkey-37o8.1	99	81.696	Gambusia_affinis
ENSPNYG00000002059	si:dkey-37o8.1	100	88.403	ENSGACG00000004505	si:dkey-37o8.1	100	88.403	Gasterosteus_aculeatus
ENSPNYG00000002059	si:dkey-37o8.1	96	75.171	ENSGAGG00000007724	-	94	75.171	Gopherus_agassizii
ENSPNYG00000002059	si:dkey-37o8.1	100	99.123	ENSHBUG00000015515	si:dkey-37o8.1	100	99.123	Haplochromis_burtoni
ENSPNYG00000002059	si:dkey-37o8.1	99	79.379	ENSHCOG00000001215	si:dkey-37o8.1	100	79.379	Hippocampus_comes
ENSPNYG00000002059	si:dkey-37o8.1	100	81.659	ENSIPUG00000004067	si:dkey-37o8.1	100	81.659	Ictalurus_punctatus
ENSPNYG00000002059	si:dkey-37o8.1	100	88.840	ENSKMAG00000015910	si:dkey-37o8.1	100	88.840	Kryptolebias_marmoratus
ENSPNYG00000002059	si:dkey-37o8.1	100	91.009	ENSLBEG00000021334	si:dkey-37o8.1	90	91.009	Labrus_bergylta
ENSPNYG00000002059	si:dkey-37o8.1	97	76.975	ENSLACG00000003948	si:dkey-37o8.1	96	76.975	Latimeria_chalumnae
ENSPNYG00000002059	si:dkey-37o8.1	98	81.655	ENSLOCG00000011245	si:dkey-37o8.1	97	81.655	Lepisosteus_oculatus
ENSPNYG00000002059	si:dkey-37o8.1	98	74.554	ENSMAMG00000009907	si:dkey-37o8.1	94	74.554	Mastacembelus_armatus
ENSPNYG00000002059	si:dkey-37o8.1	100	99.342	ENSMZEG00005018358	si:dkey-37o8.1	100	99.342	Maylandia_zebra
ENSPNYG00000002059	si:dkey-37o8.1	98	89.087	ENSMMOG00000004111	si:dkey-37o8.1	98	89.087	Mola_mola
ENSPNYG00000002059	si:dkey-37o8.1	96	81.279	ENSMALG00000017152	si:dkey-37o8.1	99	81.279	Monopterus_albus
ENSPNYG00000002059	si:dkey-37o8.1	100	98.904	ENSNBRG00000013552	si:dkey-37o8.1	100	98.904	Neolamprologus_brichardi
ENSPNYG00000002059	si:dkey-37o8.1	100	98.246	ENSONIG00000006165	si:dkey-37o8.1	100	98.246	Oreochromis_niloticus
ENSPNYG00000002059	si:dkey-37o8.1	100	90.570	ENSORLG00000019066	si:dkey-37o8.1	100	90.570	Oryzias_latipes
ENSPNYG00000002059	si:dkey-37o8.1	100	90.570	ENSORLG00020008094	si:dkey-37o8.1	100	90.570	Oryzias_latipes_hni
ENSPNYG00000002059	si:dkey-37o8.1	100	90.351	ENSORLG00015008410	si:dkey-37o8.1	100	90.351	Oryzias_latipes_hsok
ENSPNYG00000002059	si:dkey-37o8.1	100	89.912	ENSOMEG00000001868	si:dkey-37o8.1	100	89.912	Oryzias_melastigma
ENSPNYG00000002059	si:dkey-37o8.1	97	83.521	ENSPKIG00000017246	si:dkey-37o8.1	97	83.521	Paramormyrops_kingsleyae
ENSPNYG00000002059	si:dkey-37o8.1	58	68.382	ENSPSIG00000008080	-	96	68.382	Pelodiscus_sinensis
ENSPNYG00000002059	si:dkey-37o8.1	98	89.062	ENSPFOG00000013173	si:dkey-37o8.1	98	89.062	Poecilia_formosa
ENSPNYG00000002059	si:dkey-37o8.1	100	86.871	ENSPLAG00000010405	si:dkey-37o8.1	100	86.871	Poecilia_latipinna
ENSPNYG00000002059	si:dkey-37o8.1	98	89.286	ENSPMEG00000015233	si:dkey-37o8.1	98	89.286	Poecilia_mexicana
ENSPNYG00000002059	si:dkey-37o8.1	98	88.764	ENSPREG00000006280	si:dkey-37o8.1	98	88.764	Poecilia_reticulata
ENSPNYG00000002059	si:dkey-37o8.1	100	83.624	ENSPNAG00000009990	si:dkey-37o8.1	100	83.624	Pygocentrus_nattereri
ENSPNYG00000002059	si:dkey-37o8.1	98	82.143	ENSSFOG00015019070	si:dkey-37o8.1	98	82.143	Scleropages_formosus
ENSPNYG00000002059	si:dkey-37o8.1	100	91.886	ENSSMAG00000016143	si:dkey-37o8.1	100	91.886	Scophthalmus_maximus
ENSPNYG00000002059	si:dkey-37o8.1	100	91.685	ENSSDUG00000009163	si:dkey-37o8.1	100	91.685	Seriola_dumerili
ENSPNYG00000002059	si:dkey-37o8.1	100	91.466	ENSSLDG00000023761	si:dkey-37o8.1	100	91.466	Seriola_lalandi_dorsalis
ENSPNYG00000002059	si:dkey-37o8.1	99	70.524	ENSSPUG00000007467	-	99	70.524	Sphenodon_punctatus
ENSPNYG00000002059	si:dkey-37o8.1	100	91.247	ENSSPAG00000013856	si:dkey-37o8.1	100	91.247	Stegastes_partitus
ENSPNYG00000002059	si:dkey-37o8.1	99	90.066	ENSTRUG00000009006	si:dkey-37o8.1	100	90.066	Takifugu_rubripes
ENSPNYG00000002059	si:dkey-37o8.1	99	90.549	ENSTNIG00000017138	si:dkey-37o8.1	98	90.549	Tetraodon_nigroviridis
ENSPNYG00000002059	si:dkey-37o8.1	96	75.399	ENSXETG00000017744	42Sp50	96	74.775	Xenopus_tropicalis
ENSPNYG00000002059	si:dkey-37o8.1	98	89.213	ENSXCOG00000012296	si:dkey-37o8.1	98	89.213	Xiphophorus_couchianus
ENSPNYG00000002059	si:dkey-37o8.1	98	89.286	ENSXMAG00000001998	si:dkey-37o8.1	98	89.286	Xiphophorus_maculatus