EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000002098 (Gene tree)
Gene ID: 102200754
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 11852 bases
Position: chrJH419250.1:2255986-2267837
Accession: 102200754
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000002656	Fox-1_C	PF12414.8	2.1e-32	1	1
ENSPNYP00000002656	RRM_1	PF00076.22	8.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000002723	-	1143	XM_005732015	ENSPNYP00000002656	380 (aa)	XP_005732072	UPI0003AF885B

Gene Model

Click here to download ENSPNYG00000002098's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000002098's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000002098	rbfox1l	97	45.932	ENSPNYG00000010414	rbfox3b	57	61.739
ENSPNYG00000002098	rbfox1l	97	46.114	ENSPNYG00000009079	-	56	63.913
ENSPNYG00000002098	rbfox1l	63	61.977	ENSPNYG00000020595	-	64	64.394
ENSPNYG00000002098	rbfox1l	63	63.320	ENSPNYG00000016161	rbfox2	68	57.051

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000002098	rbfox1l	97	88.949	ENSAPOG00000016304	rbfox1l	98	87.332	Acanthochromis_polyacanthus
ENSPNYG00000002098	rbfox1l	100	86.614	ENSACIG00000006441	rbfox1l	100	86.614	Amphilophus_citrinellus
ENSPNYG00000002098	rbfox1l	83	84.591	ENSAOCG00000020938	rbfox1l	94	82.500	Amphiprion_ocellaris
ENSPNYG00000002098	rbfox1l	100	89.295	ENSAPEG00000008232	rbfox1l	100	87.728	Amphiprion_percula
ENSPNYG00000002098	rbfox1l	100	85.640	ENSATEG00000022649	rbfox1l	100	85.640	Anabas_testudineus
ENSPNYG00000002098	rbfox1l	64	71.713	ENSACAG00000011931	-	89	73.171	Anolis_carolinensis
ENSPNYG00000002098	rbfox1l	100	99.211	ENSACLG00000021394	rbfox1l	100	99.211	Astatotilapia_calliptera
ENSPNYG00000002098	rbfox1l	100	84.974	ENSAMXG00000010470	rbfox1l	100	84.715	Astyanax_mexicanus
ENSPNYG00000002098	rbfox1l	100	54.061	ENSCPBG00000010944	-	100	55.725	Chrysemys_picta_bellii
ENSPNYG00000002098	rbfox1l	100	86.198	ENSCSEG00000018898	rbfox1l	100	86.458	Cynoglossus_semilaevis
ENSPNYG00000002098	rbfox1l	100	87.990	ENSCVAG00000007986	rbfox1l	100	86.945	Cyprinodon_variegatus
ENSPNYG00000002098	rbfox1l	100	83.161	ENSDARG00000021184	rbfox1l	100	83.420	Danio_rerio
ENSPNYG00000002098	rbfox1l	100	81.425	ENSELUG00000015077	rbfox1l	100	82.952	Esox_lucius
ENSPNYG00000002098	rbfox1l	79	85.366	ENSFHEG00000016557	rbfox1l	95	85.366	Fundulus_heteroclitus
ENSPNYG00000002098	rbfox1l	100	82.245	ENSGMOG00000005040	rbfox1l	100	82.245	Gadus_morhua
ENSPNYG00000002098	rbfox1l	92	88.136	ENSGAFG00000013211	rbfox1l	97	88.136	Gambusia_affinis
ENSPNYG00000002098	rbfox1l	100	87.728	ENSGACG00000010757	rbfox1l	100	87.728	Gasterosteus_aculeatus
ENSPNYG00000002098	rbfox1l	65	68.254	ENSGAGG00000012440	-	84	72.016	Gopherus_agassizii
ENSPNYG00000002098	rbfox1l	100	99.211	ENSHBUG00000013406	rbfox1l	100	99.211	Haplochromis_burtoni
ENSPNYG00000002098	rbfox1l	100	83.854	ENSHCOG00000020771	rbfox1l	100	84.115	Hippocampus_comes
ENSPNYG00000002098	rbfox1l	99	77.105	ENSIPUG00000000065	rbfox1l	99	78.371	Ictalurus_punctatus
ENSPNYG00000002098	rbfox1l	100	87.532	ENSKMAG00000005146	rbfox1l	100	87.792	Kryptolebias_marmoratus
ENSPNYG00000002098	rbfox1l	100	90.078	ENSLBEG00000017089	rbfox1l	100	90.078	Labrus_bergylta
ENSPNYG00000002098	rbfox1l	100	89.817	ENSMAMG00000019480	rbfox1l	100	89.817	Mastacembelus_armatus
ENSPNYG00000002098	rbfox1l	100	99.211	ENSMZEG00005016374	rbfox1l	100	99.211	Maylandia_zebra
ENSPNYG00000002098	rbfox1l	100	88.251	ENSMMOG00000016530	rbfox1l	100	88.251	Mola_mola
ENSPNYG00000002098	rbfox1l	100	85.379	ENSMALG00000009384	rbfox1l	100	85.379	Monopterus_albus
ENSPNYG00000002098	rbfox1l	100	98.158	ENSNBRG00000003346	rbfox1l	100	98.158	Neolamprologus_brichardi
ENSPNYG00000002098	rbfox1l	100	98.947	ENSONIG00000012754	rbfox1l	100	98.947	Oreochromis_niloticus
ENSPNYG00000002098	rbfox1l	100	87.467	ENSORLG00000011269	rbfox1l	100	85.901	Oryzias_latipes
ENSPNYG00000002098	rbfox1l	100	87.990	ENSORLG00020000162	rbfox1l	100	86.423	Oryzias_latipes_hni
ENSPNYG00000002098	rbfox1l	100	87.990	ENSORLG00015013464	rbfox1l	100	86.423	Oryzias_latipes_hsok
ENSPNYG00000002098	rbfox1l	100	89.556	ENSOMEG00000010584	rbfox1l	100	86.945	Oryzias_melastigma
ENSPNYG00000002098	rbfox1l	100	86.198	ENSPKIG00000012029	rbfox1l	100	86.198	Paramormyrops_kingsleyae
ENSPNYG00000002098	rbfox1l	100	80.208	ENSPMGG00000012082	rbfox1l	100	79.688	Periophthalmus_magnuspinnatus
ENSPNYG00000002098	rbfox1l	100	88.773	ENSPFOG00000009338	rbfox1l	100	88.773	Poecilia_formosa
ENSPNYG00000002098	rbfox1l	85	80.122	ENSPLAG00000012816	rbfox1l	99	80.122	Poecilia_latipinna
ENSPNYG00000002098	rbfox1l	100	84.856	ENSPMEG00000017597	rbfox1l	100	84.856	Poecilia_mexicana
ENSPNYG00000002098	rbfox1l	100	84.856	ENSPREG00000007940	rbfox1l	100	84.856	Poecilia_reticulata
ENSPNYG00000002098	rbfox1l	100	84.496	ENSPNAG00000001620	rbfox1l	100	83.979	Pygocentrus_nattereri
ENSPNYG00000002098	rbfox1l	100	82.338	ENSSFOG00015000675	rbfox1l	100	82.597	Scleropages_formosus
ENSPNYG00000002098	rbfox1l	100	87.467	ENSSMAG00000013090	rbfox1l	100	87.467	Scophthalmus_maximus
ENSPNYG00000002098	rbfox1l	100	86.889	ENSSDUG00000008705	rbfox1l	100	86.632	Seriola_dumerili
ENSPNYG00000002098	rbfox1l	100	87.113	ENSSLDG00000022256	rbfox1l	100	86.856	Seriola_lalandi_dorsalis
ENSPNYG00000002098	rbfox1l	100	90.078	ENSSPAG00000016620	rbfox1l	100	88.512	Stegastes_partitus
ENSPNYG00000002098	rbfox1l	96	83.514	ENSTRUG00000015905	rbfox1l	100	83.784	Takifugu_rubripes
ENSPNYG00000002098	rbfox1l	64	80.297	ENSTNIG00000008088	rbfox1l	97	82.443	Tetraodon_nigroviridis
ENSPNYG00000002098	rbfox1l	100	88.773	ENSXMAG00000023471	rbfox1l	100	88.773	Xiphophorus_maculatus