EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000002118 (Gene tree)
Gene ID: 102209676
Gene Symbol: RBM20
Alias: -
Full Name: RNA binding motif protein 20
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 47685 bases
Position: chrJH419339.1:370472-418156
Accession: 102209676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000002701	zf-met	PF12874.7	0.00012	1	1
ENSPNYP00000002691	zf-met	PF12874.7	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000002771	RBM20-202	3324	XM_005743632	ENSPNYP00000002701	1107 (aa)	XP_005743689	UPI0003AFD6CC
ENSPNYT00000002758	RBM20-201	5446	XM_005743631	ENSPNYP00000002691	1143 (aa)	XP_005743688	UPI0003AF7931

Gene Model

Click here to download ENSPNYG00000002118's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000002118's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000002118	RBM20	88	79.048	ENSAPOG00000011327	RBM20	99	79.758	Acanthochromis_polyacanthus
ENSPNYG00000002118	RBM20	82	92.982	ENSACIG00000016368	RBM20	96	92.982	Amphilophus_citrinellus
ENSPNYG00000002118	RBM20	100	77.845	ENSAOCG00000018378	RBM20	100	77.411	Amphiprion_ocellaris
ENSPNYG00000002118	RBM20	84	87.719	ENSATEG00000008782	RBM20	96	87.719	Anabas_testudineus
ENSPNYG00000002118	RBM20	100	99.213	ENSACLG00000025652	RBM20	100	99.213	Astatotilapia_calliptera
ENSPNYG00000002118	RBM20	100	52.032	ENSELUG00000022906	RBM20	100	53.021	Esox_lucius
ENSPNYG00000002118	RBM20	100	98.826	ENSHBUG00000016743	RBM20	100	98.826	Haplochromis_burtoni
ENSPNYG00000002118	RBM20	99	68.211	ENSKMAG00000020318	RBM20	99	68.125	Kryptolebias_marmoratus
ENSPNYG00000002118	RBM20	99	71.545	ENSMAMG00000014492	RBM20	100	71.429	Mastacembelus_armatus
ENSPNYG00000002118	RBM20	100	99.125	ENSMZEG00005003037	RBM20	100	99.125	Maylandia_zebra
ENSPNYG00000002118	RBM20	91	64.270	ENSMMOG00000021599	RBM20	96	63.596	Mola_mola
ENSPNYG00000002118	RBM20	82	77.143	ENSMODG00000010399	RBM20	74	77.143	Monodelphis_domestica
ENSPNYG00000002118	RBM20	100	97.205	ENSNBRG00000003302	RBM20	100	97.205	Neolamprologus_brichardi
ENSPNYG00000002118	RBM20	95	88.993	ENSONIG00000016294	RBM20	100	88.993	Oreochromis_niloticus
ENSPNYG00000002118	RBM20	99	46.683	ENSPKIG00000017337	RBM20	100	47.285	Paramormyrops_kingsleyae
ENSPNYG00000002118	RBM20	100	73.043	ENSSMAG00000001397	RBM20	100	72.696	Scophthalmus_maximus
ENSPNYG00000002118	RBM20	99	76.513	ENSSDUG00000010084	RBM20	97	76.152	Seriola_dumerili
ENSPNYG00000002118	RBM20	100	76.722	ENSSLDG00000012344	RBM20	100	76.373	Seriola_lalandi_dorsalis
ENSPNYG00000002118	RBM20	100	77.700	ENSSPAG00000005114	RBM20	100	77.700	Stegastes_partitus