EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000002189 (Gene tree)
Gene ID: 102203194
Gene Symbol: gfi1aa
Alias: gfi1.1|gfi1a|zgc:113277
Full Name: zinc finger protein Gfi-1-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 2294 bases
Position: chrJH419209.1:504803-507096
Accession: 102203194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000002798	zf-C2H2	PF00096.26	2.2e-23	1	5
ENSPNYP00000002798	zf-C2H2	PF00096.26	2.2e-23	2	5
ENSPNYP00000002798	zf-C2H2	PF00096.26	2.2e-23	3	5
ENSPNYP00000002798	zf-C2H2	PF00096.26	2.2e-23	4	5
ENSPNYP00000002798	zf-C2H2	PF00096.26	2.2e-23	5	5
ENSPNYP00000002798	zf-met	PF12874.7	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000002871	-	1191	XM_005721011	ENSPNYP00000002798	396 (aa)	XP_005721068	-

Gene Model

Click here to download ENSPNYG00000002189's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000002189's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000002189	gfi1aa	53	46.386	ENSPNYG00000019368	-	85	46.386
ENSPNYG00000002189	gfi1aa	51	42.647	ENSPNYG00000017141	-	87	42.647
ENSPNYG00000002189	gfi1aa	56	45.833	ENSPNYG00000015803	-	94	45.270
ENSPNYG00000002189	gfi1aa	62	41.667	ENSPNYG00000008731	-	93	43.949
ENSPNYG00000002189	gfi1aa	54	42.466	ENSPNYG00000010647	-	92	42.466
ENSPNYG00000002189	gfi1aa	53	45.833	ENSPNYG00000018920	-	88	45.033
ENSPNYG00000002189	gfi1aa	51	39.109	ENSPNYG00000005945	-	75	39.109
ENSPNYG00000002189	gfi1aa	61	36.441	ENSPNYG00000015217	snai2	68	36.441
ENSPNYG00000002189	gfi1aa	51	50.769	ENSPNYG00000018597	-	95	50.769
ENSPNYG00000002189	gfi1aa	60	41.176	ENSPNYG00000001524	ZNF319	89	41.176
ENSPNYG00000002189	gfi1aa	65	40.000	ENSPNYG00000017692	znf646	50	40.000
ENSPNYG00000002189	gfi1aa	65	46.552	ENSPNYG00000012877	znf236	67	46.552
ENSPNYG00000002189	gfi1aa	73	37.778	ENSPNYG00000004668	zbtb47b	68	37.778
ENSPNYG00000002189	gfi1aa	50	42.169	ENSPNYG00000003392	-	97	42.169
ENSPNYG00000002189	gfi1aa	55	37.566	ENSPNYG00000005202	-	96	47.500
ENSPNYG00000002189	gfi1aa	100	63.524	ENSPNYG00000021183	gfi1ab	100	63.275
ENSPNYG00000002189	gfi1aa	61	44.643	ENSPNYG00000020245	-	89	44.643
ENSPNYG00000002189	gfi1aa	51	44.643	ENSPNYG00000002684	-	97	44.643

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000002189	gfi1aa	100	87.719	ENSAPOG00000005043	gfi1aa	100	87.719	Acanthochromis_polyacanthus
ENSPNYG00000002189	gfi1aa	100	90.680	ENSACIG00000021378	gfi1aa	100	90.680	Amphilophus_citrinellus
ENSPNYG00000002189	gfi1aa	100	86.717	ENSAOCG00000022957	gfi1aa	100	86.717	Amphiprion_ocellaris
ENSPNYG00000002189	gfi1aa	100	86.967	ENSAPEG00000014539	gfi1aa	100	86.967	Amphiprion_percula
ENSPNYG00000002189	gfi1aa	100	81.750	ENSATEG00000019026	gfi1aa	99	87.544	Anabas_testudineus
ENSPNYG00000002189	gfi1aa	100	96.725	ENSACLG00000008641	gfi1aa	100	96.725	Astatotilapia_calliptera
ENSPNYG00000002189	gfi1aa	100	62.406	ENSDARG00000020746	gfi1aa	100	62.406	Danio_rerio
ENSPNYG00000002189	gfi1aa	100	95.707	ENSHBUG00000007389	gfi1aa	100	95.707	Haplochromis_burtoni
ENSPNYG00000002189	gfi1aa	100	76.322	ENSKMAG00000002148	gfi1aa	100	76.322	Kryptolebias_marmoratus
ENSPNYG00000002189	gfi1aa	100	78.000	ENSLBEG00000006603	gfi1aa	100	78.000	Labrus_bergylta
ENSPNYG00000002189	gfi1aa	100	79.449	ENSMAMG00000004896	gfi1aa	100	79.699	Mastacembelus_armatus
ENSPNYG00000002189	gfi1aa	100	96.725	ENSMZEG00005004578	gfi1aa	100	96.725	Maylandia_zebra
ENSPNYG00000002189	gfi1aa	83	77.551	ENSMMOG00000006167	gfi1aa	99	77.551	Mola_mola
ENSPNYG00000002189	gfi1aa	100	96.725	ENSNBRG00000002673	gfi1aa	100	96.725	Neolamprologus_brichardi
ENSPNYG00000002189	gfi1aa	100	79.012	ENSSMAG00000006797	gfi1aa	100	79.506	Scophthalmus_maximus
ENSPNYG00000002189	gfi1aa	100	83.333	ENSSDUG00000011654	gfi1aa	100	83.333	Seriola_dumerili
ENSPNYG00000002189	gfi1aa	100	82.544	ENSSLDG00000016512	gfi1aa	100	82.544	Seriola_lalandi_dorsalis
ENSPNYG00000002189	gfi1aa	85	84.164	ENSSPAG00000000927	gfi1aa	94	84.164	Stegastes_partitus
ENSPNYG00000002189	gfi1aa	100	76.808	ENSTRUG00000004744	gfi1aa	100	76.808	Takifugu_rubripes