EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000002582 (Gene tree)
Gene ID: 102206634
Gene Symbol: tnrc6c2
Alias: si:dkey-10p5.9
Full Name: trinucleotide repeat-containing gene 6C protein-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 15082 bases
Position: chrJH419439.1:706685-721766
Accession: 102206634
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000003303	Ago_hook	PF10427.9	3.8e-07	1	1
ENSPNYP00000003303	RRM_1	PF00076.22	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000003390	-	4908	XM_005748976	ENSPNYP00000003303	1635 (aa)	XP_005749033	-

Gene Model

Click here to download ENSPNYG00000002582's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000002582's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000002582	tnrc6c2	100	55.811	ENSPNYG00000014477	tnrc6c1	100	54.691

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000002582	tnrc6c2	100	89.064	ENSAOCG00000017648	tnrc6c2	87	88.821	Amphiprion_ocellaris
ENSPNYG00000002582	tnrc6c2	95	89.845	ENSATEG00000003656	tnrc6c2	100	89.845	Anabas_testudineus
ENSPNYG00000002582	tnrc6c2	100	99.450	ENSACLG00000006469	tnrc6c2	88	99.450	Astatotilapia_calliptera
ENSPNYG00000002582	tnrc6c2	100	58.522	ENSAMXG00000009579	tnrc6c2	99	57.279	Astyanax_mexicanus
ENSPNYG00000002582	tnrc6c2	100	57.879	ENSDARG00000103851	tnrc6c2	100	55.621	Danio_rerio
ENSPNYG00000002582	tnrc6c2	100	60.818	ENSELUG00000007206	tnrc6c2	97	74.124	Esox_lucius
ENSPNYG00000002582	tnrc6c2	96	56.204	ENSELUG00000008149	-	88	81.050	Esox_lucius
ENSPNYG00000002582	tnrc6c2	100	82.089	ENSFHEG00000003901	tnrc6c2	100	82.635	Fundulus_heteroclitus
ENSPNYG00000002582	tnrc6c2	100	68.713	ENSGACG00000019401	tnrc6c2	90	76.228	Gasterosteus_aculeatus
ENSPNYG00000002582	tnrc6c2	100	99.450	ENSHBUG00000018310	tnrc6c2	88	99.450	Haplochromis_burtoni
ENSPNYG00000002582	tnrc6c2	100	80.133	ENSHCOG00000017802	tnrc6c2	87	79.333	Hippocampus_comes
ENSPNYG00000002582	tnrc6c2	100	54.306	ENSIPUG00000022767	tnrc6c2	99	52.418	Ictalurus_punctatus
ENSPNYG00000002582	tnrc6c2	100	87.842	ENSMAMG00000001718	tnrc6c2	100	87.173	Mastacembelus_armatus
ENSPNYG00000002582	tnrc6c2	100	99.511	ENSMZEG00005023905	tnrc6c2	88	99.511	Maylandia_zebra
ENSPNYG00000002582	tnrc6c2	100	86.844	ENSMALG00000020932	tnrc6c2	100	86.844	Monopterus_albus
ENSPNYG00000002582	tnrc6c2	95	96.779	ENSNBRG00000000452	tnrc6c2	57	94.912	Neolamprologus_brichardi
ENSPNYG00000002582	tnrc6c2	98	92.178	ENSONIG00000018123	tnrc6c2	100	92.178	Oreochromis_niloticus
ENSPNYG00000002582	tnrc6c2	100	81.895	ENSORLG00000003327	tnrc6c2	87	82.078	Oryzias_latipes
ENSPNYG00000002582	tnrc6c2	100	82.807	ENSORLG00020010730	tnrc6c2	87	82.260	Oryzias_latipes_hni
ENSPNYG00000002582	tnrc6c2	100	82.807	ENSORLG00015009232	tnrc6c2	87	82.382	Oryzias_latipes_hsok
ENSPNYG00000002582	tnrc6c2	100	83.859	ENSOMEG00000017952	tnrc6c2	87	83.495	Oryzias_melastigma
ENSPNYG00000002582	tnrc6c2	95	77.331	ENSPFOG00000011590	tnrc6c2	90	77.013	Poecilia_formosa
ENSPNYG00000002582	tnrc6c2	100	78.002	ENSPLAG00000006992	tnrc6c2	62	86.867	Poecilia_latipinna
ENSPNYG00000002582	tnrc6c2	100	83.879	ENSPMEG00000012946	tnrc6c2	93	83.920	Poecilia_mexicana
ENSPNYG00000002582	tnrc6c2	100	78.795	ENSPREG00000015823	tnrc6c2	61	87.882	Poecilia_reticulata
ENSPNYG00000002582	tnrc6c2	100	57.635	ENSPNAG00000026838	tnrc6c2	99	57.757	Pygocentrus_nattereri
ENSPNYG00000002582	tnrc6c2	100	84.927	ENSSMAG00000015145	tnrc6c2	100	84.867	Scophthalmus_maximus
ENSPNYG00000002582	tnrc6c2	100	89.362	ENSSDUG00000020741	tnrc6c2	100	89.605	Seriola_dumerili
ENSPNYG00000002582	tnrc6c2	100	89.058	ENSSLDG00000002077	tnrc6c2	100	89.301	Seriola_lalandi_dorsalis
ENSPNYG00000002582	tnrc6c2	100	90.716	ENSSPAG00000013052	tnrc6c2	87	90.413	Stegastes_partitus
ENSPNYG00000002582	tnrc6c2	91	84.902	ENSTNIG00000004178	tnrc6c2	90	84.464	Tetraodon_nigroviridis
ENSPNYG00000002582	tnrc6c2	55	86.320	ENSXCOG00000013252	tnrc6c2	100	78.584	Xiphophorus_couchianus
ENSPNYG00000002582	tnrc6c2	100	84.102	ENSXMAG00000006739	tnrc6c2	100	83.981	Xiphophorus_maculatus