EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000002942 (Gene tree)
Gene ID: 102195876
Gene Symbol: rad54l
Alias: zgc:56289
Full Name: RAD54 like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 10515 bases
Position: chrJH419262.1:1814490-1825004
Accession: 102195876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000003833	ResIII	PF04851.15	2.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000003932	-	2160	XM_005734230	ENSPNYP00000003833	719 (aa)	XP_005734287	-

Gene Model

Click here to download ENSPNYG00000002942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000002942's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000002942	rad54l	71	30.664	ENSPNYG00000013001	chd1l	50	30.664
ENSPNYG00000002942	rad54l	92	43.192	ENSPNYG00000018303	rad54b	82	43.192

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000002942	rad54l	99	74.138	ENSG00000085999	RAD54L	100	84.000	Homo_sapiens
ENSPNYG00000002942	rad54l	98	80.805	ENSAPOG00000011643	rad54l	99	80.805	Acanthochromis_polyacanthus
ENSPNYG00000002942	rad54l	99	73.113	ENSAMEG00000013902	RAD54L	99	73.113	Ailuropoda_melanoleuca
ENSPNYG00000002942	rad54l	99	85.333	ENSACIG00000001939	rad54l	99	85.333	Amphilophus_citrinellus
ENSPNYG00000002942	rad54l	98	84.005	ENSAOCG00000017576	rad54l	99	84.005	Amphiprion_ocellaris
ENSPNYG00000002942	rad54l	95	88.840	ENSAPEG00000020658	rad54l	93	88.840	Amphiprion_percula
ENSPNYG00000002942	rad54l	95	89.197	ENSATEG00000006767	rad54l	96	89.197	Anabas_testudineus
ENSPNYG00000002942	rad54l	97	80.403	ENSAPLG00000006389	RAD54L	97	80.403	Anas_platyrhynchos
ENSPNYG00000002942	rad54l	99	76.831	ENSACAG00000002312	RAD54L	99	76.831	Anolis_carolinensis
ENSPNYG00000002942	rad54l	99	74.005	ENSANAG00000035439	RAD54L	99	74.005	Aotus_nancymaae
ENSPNYG00000002942	rad54l	100	99.444	ENSACLG00000018711	rad54l	100	99.444	Astatotilapia_calliptera
ENSPNYG00000002942	rad54l	99	80.133	ENSAMXG00000012777	rad54l	99	80.133	Astyanax_mexicanus
ENSPNYG00000002942	rad54l	99	73.377	ENSBTAG00000019901	RAD54L	99	73.377	Bos_taurus
ENSPNYG00000002942	rad54l	94	58.944	WBGene00004298	rad-54	82	58.003	Caenorhabditis_elegans
ENSPNYG00000002942	rad54l	95	74.003	ENSCJAG00000021080	RAD54L	91	74.003	Callithrix_jacchus
ENSPNYG00000002942	rad54l	99	73.475	ENSCAFG00000004272	RAD54L	99	73.475	Canis_familiaris
ENSPNYG00000002942	rad54l	99	73.510	ENSCAFG00020015066	RAD54L	99	73.510	Canis_lupus_dingo
ENSPNYG00000002942	rad54l	99	73.280	ENSCHIG00000020118	RAD54L	99	73.280	Capra_hircus
ENSPNYG00000002942	rad54l	96	78.098	ENSTSYG00000002032	RAD54L	91	78.098	Carlito_syrichta
ENSPNYG00000002942	rad54l	99	73.873	ENSCPOG00000006768	RAD54L	99	73.873	Cavia_porcellus
ENSPNYG00000002942	rad54l	99	74.005	ENSCCAG00000025783	RAD54L	99	74.005	Cebus_capucinus
ENSPNYG00000002942	rad54l	99	73.740	ENSCATG00000030589	RAD54L	99	73.740	Cercocebus_atys
ENSPNYG00000002942	rad54l	99	73.873	ENSCLAG00000004645	RAD54L	99	73.873	Chinchilla_lanigera
ENSPNYG00000002942	rad54l	99	73.873	ENSCSAG00000001229	RAD54L	99	73.873	Chlorocebus_sabaeus
ENSPNYG00000002942	rad54l	99	76.298	ENSCPBG00000005675	RAD54L	99	76.298	Chrysemys_picta_bellii
ENSPNYG00000002942	rad54l	94	65.123	ENSCING00000024456	-	89	64.869	Ciona_intestinalis
ENSPNYG00000002942	rad54l	95	64.920	ENSCSAVG00000010859	-	89	64.431	Ciona_savignyi
ENSPNYG00000002942	rad54l	99	73.607	ENSCANG00000034891	RAD54L	99	73.607	Colobus_angolensis_palliatus
ENSPNYG00000002942	rad54l	99	73.103	ENSCGRG00001014807	Rad54l	99	73.103	Cricetulus_griseus_chok1gshd
ENSPNYG00000002942	rad54l	99	73.103	ENSCGRG00000016038	Rad54l	99	73.103	Cricetulus_griseus_crigri
ENSPNYG00000002942	rad54l	99	85.597	ENSCSEG00000001983	rad54l	99	85.597	Cynoglossus_semilaevis
ENSPNYG00000002942	rad54l	83	84.211	ENSCVAG00000019561	rad54l	100	84.211	Cyprinodon_variegatus
ENSPNYG00000002942	rad54l	99	79.223	ENSDARG00000018623	rad54l	99	79.223	Danio_rerio
ENSPNYG00000002942	rad54l	99	73.077	ENSDNOG00000003395	RAD54L	99	73.077	Dasypus_novemcinctus
ENSPNYG00000002942	rad54l	99	68.700	ENSDORG00000002632	Rad54l	99	68.700	Dipodomys_ordii
ENSPNYG00000002942	rad54l	95	56.706	FBgn0002989	okr	86	56.706	Drosophila_melanogaster
ENSPNYG00000002942	rad54l	74	72.967	ENSETEG00000000550	RAD54L	77	72.967	Echinops_telfairi
ENSPNYG00000002942	rad54l	98	76.554	ENSEASG00005004511	RAD54L	99	75.668	Equus_asinus_asinus
ENSPNYG00000002942	rad54l	99	77.451	ENSECAG00000008760	RAD54L	99	77.731	Equus_caballus
ENSPNYG00000002942	rad54l	99	72.812	ENSEEUG00000008113	RAD54L	99	72.812	Erinaceus_europaeus
ENSPNYG00000002942	rad54l	99	81.142	ENSELUG00000002295	rad54l	99	81.142	Esox_lucius
ENSPNYG00000002942	rad54l	99	72.812	ENSFCAG00000003444	RAD54L	99	72.812	Felis_catus
ENSPNYG00000002942	rad54l	99	75.995	ENSFALG00000009480	RAD54L	99	76.064	Ficedula_albicollis
ENSPNYG00000002942	rad54l	99	73.475	ENSFDAG00000007806	RAD54L	99	73.475	Fukomys_damarensis
ENSPNYG00000002942	rad54l	61	81.963	ENSFHEG00000009824	rad54l	74	81.963	Fundulus_heteroclitus
ENSPNYG00000002942	rad54l	99	79.973	ENSGMOG00000014568	rad54l	100	79.973	Gadus_morhua
ENSPNYG00000002942	rad54l	99	75.397	ENSGALG00000010356	RAD54L	92	75.632	Gallus_gallus
ENSPNYG00000002942	rad54l	90	79.883	ENSGAFG00000011110	rad54l	99	79.883	Gambusia_affinis
ENSPNYG00000002942	rad54l	99	82.095	ENSGACG00000003111	rad54l	98	82.095	Gasterosteus_aculeatus
ENSPNYG00000002942	rad54l	99	75.399	ENSGAGG00000014089	RAD54L	96	75.399	Gopherus_agassizii
ENSPNYG00000002942	rad54l	99	73.740	ENSGGOG00000010602	RAD54L	99	73.740	Gorilla_gorilla
ENSPNYG00000002942	rad54l	100	99.583	ENSHBUG00000007793	rad54l	100	99.583	Haplochromis_burtoni
ENSPNYG00000002942	rad54l	99	73.342	ENSHGLG00000000753	RAD54L	99	73.342	Heterocephalus_glaber_female
ENSPNYG00000002942	rad54l	99	73.342	ENSHGLG00100016987	RAD54L	99	73.342	Heterocephalus_glaber_male
ENSPNYG00000002942	rad54l	96	83.671	ENSIPUG00000015999	rad54l	98	83.671	Ictalurus_punctatus
ENSPNYG00000002942	rad54l	99	73.077	ENSSTOG00000029125	RAD54L	99	73.077	Ictidomys_tridecemlineatus
ENSPNYG00000002942	rad54l	99	62.819	ENSJJAG00000000235	-	99	62.416	Jaculus_jaculus
ENSPNYG00000002942	rad54l	99	82.195	ENSKMAG00000009944	rad54l	99	82.195	Kryptolebias_marmoratus
ENSPNYG00000002942	rad54l	94	88.807	ENSLBEG00000014617	rad54l	97	88.807	Labrus_bergylta
ENSPNYG00000002942	rad54l	99	79.814	ENSLOCG00000004144	rad54l	99	80.617	Lepisosteus_oculatus
ENSPNYG00000002942	rad54l	99	72.980	ENSLAFG00000007583	RAD54L	100	73.377	Loxodonta_africana
ENSPNYG00000002942	rad54l	99	73.607	ENSMFAG00000031241	RAD54L	99	73.607	Macaca_fascicularis
ENSPNYG00000002942	rad54l	99	73.607	ENSMMUG00000011568	RAD54L	99	73.607	Macaca_mulatta
ENSPNYG00000002942	rad54l	99	73.607	ENSMNEG00000038562	RAD54L	99	73.607	Macaca_nemestrina
ENSPNYG00000002942	rad54l	99	73.740	ENSMLEG00000038145	RAD54L	99	73.740	Mandrillus_leucophaeus
ENSPNYG00000002942	rad54l	95	86.637	ENSMAMG00000022180	rad54l	99	86.637	Mastacembelus_armatus
ENSPNYG00000002942	rad54l	100	99.305	ENSMZEG00005018081	rad54l	100	99.305	Maylandia_zebra
ENSPNYG00000002942	rad54l	99	75.867	ENSMGAG00000010634	RAD54L	99	75.867	Meleagris_gallopavo
ENSPNYG00000002942	rad54l	99	73.502	ENSMAUG00000020076	Rad54l	99	73.502	Mesocricetus_auratus
ENSPNYG00000002942	rad54l	99	73.607	ENSMICG00000003266	RAD54L	99	73.607	Microcebus_murinus
ENSPNYG00000002942	rad54l	99	73.635	ENSMOCG00000001778	Rad54l	99	73.635	Microtus_ochrogaster
ENSPNYG00000002942	rad54l	99	80.186	ENSMALG00000021148	rad54l	100	80.186	Monopterus_albus
ENSPNYG00000002942	rad54l	99	69.909	MGP_CAROLIEiJ_G0026325	Rad54l	99	69.909	Mus_caroli
ENSPNYG00000002942	rad54l	99	72.944	ENSMUSG00000028702	Rad54l	99	72.944	Mus_musculus
ENSPNYG00000002942	rad54l	99	73.174	MGP_PahariEiJ_G0028657	Rad54l	99	73.174	Mus_pahari
ENSPNYG00000002942	rad54l	99	73.077	MGP_SPRETEiJ_G0027297	Rad54l	99	73.077	Mus_spretus
ENSPNYG00000002942	rad54l	99	73.413	ENSMPUG00000012883	RAD54L	99	73.413	Mustela_putorius_furo
ENSPNYG00000002942	rad54l	99	73.907	ENSMLUG00000003763	RAD54L	99	73.907	Myotis_lucifugus
ENSPNYG00000002942	rad54l	99	73.307	ENSNGAG00000024213	Rad54l	99	73.307	Nannospalax_galili
ENSPNYG00000002942	rad54l	99	73.740	ENSNLEG00000016548	RAD54L	99	73.740	Nomascus_leucogenys
ENSPNYG00000002942	rad54l	95	77.013	ENSMEUG00000006793	RAD54L	100	77.013	Notamacropus_eugenii
ENSPNYG00000002942	rad54l	87	79.720	ENSOPRG00000016016	RAD54L	90	79.720	Ochotona_princeps
ENSPNYG00000002942	rad54l	99	74.138	ENSODEG00000008519	RAD54L	99	74.138	Octodon_degus
ENSPNYG00000002942	rad54l	99	92.637	ENSONIG00000007659	rad54l	100	91.788	Oreochromis_niloticus
ENSPNYG00000002942	rad54l	99	74.005	ENSOCUG00000005229	RAD54L	99	73.740	Oryctolagus_cuniculus
ENSPNYG00000002942	rad54l	99	79.757	ENSORLG00000002958	rad54l	99	79.757	Oryzias_latipes
ENSPNYG00000002942	rad54l	96	83.502	ENSORLG00020006554	rad54l	99	83.502	Oryzias_latipes_hni
ENSPNYG00000002942	rad54l	99	79.650	ENSORLG00015002907	rad54l	99	79.650	Oryzias_latipes_hsok
ENSPNYG00000002942	rad54l	99	80.270	ENSOMEG00000007770	rad54l	99	80.270	Oryzias_melastigma
ENSPNYG00000002942	rad54l	99	73.148	ENSOARG00000002264	RAD54L	99	73.148	Ovis_aries
ENSPNYG00000002942	rad54l	99	73.873	ENSPPAG00000031222	RAD54L	99	73.873	Pan_paniscus
ENSPNYG00000002942	rad54l	99	72.812	ENSPPRG00000010317	RAD54L	99	72.812	Panthera_pardus
ENSPNYG00000002942	rad54l	99	72.812	ENSPTIG00000012200	RAD54L	99	72.812	Panthera_tigris_altaica
ENSPNYG00000002942	rad54l	99	73.873	ENSPTRG00000000689	RAD54L	99	73.873	Pan_troglodytes
ENSPNYG00000002942	rad54l	99	73.740	ENSPANG00000016295	RAD54L	99	73.740	Papio_anubis
ENSPNYG00000002942	rad54l	98	74.696	ENSPKIG00000016172	rad54l	99	74.696	Paramormyrops_kingsleyae
ENSPNYG00000002942	rad54l	96	80.347	ENSPSIG00000003258	RAD54L	93	80.347	Pelodiscus_sinensis
ENSPNYG00000002942	rad54l	98	77.224	ENSPMGG00000016335	rad54l	99	77.224	Periophthalmus_magnuspinnatus
ENSPNYG00000002942	rad54l	99	73.369	ENSPEMG00000011422	Rad54l	99	73.369	Peromyscus_maniculatus_bairdii
ENSPNYG00000002942	rad54l	98	65.779	ENSPMAG00000007719	rad54l	99	65.241	Petromyzon_marinus
ENSPNYG00000002942	rad54l	99	74.867	ENSPCIG00000029032	RAD54L	99	74.867	Phascolarctos_cinereus
ENSPNYG00000002942	rad54l	86	86.386	ENSPFOG00000013732	rad54l	96	86.386	Poecilia_formosa
ENSPNYG00000002942	rad54l	86	83.173	ENSPLAG00000023416	rad54l	99	83.173	Poecilia_latipinna
ENSPNYG00000002942	rad54l	90	80.499	ENSPMEG00000008299	rad54l	99	80.470	Poecilia_mexicana
ENSPNYG00000002942	rad54l	99	80.054	ENSPREG00000019955	rad54l	99	80.054	Poecilia_reticulata
ENSPNYG00000002942	rad54l	99	61.722	ENSPPYG00000001398	RAD54L	99	61.722	Pongo_abelii
ENSPNYG00000002942	rad54l	76	77.778	ENSPCAG00000005323	RAD54L	80	77.778	Procavia_capensis
ENSPNYG00000002942	rad54l	99	73.210	ENSPCOG00000015423	RAD54L	99	73.210	Propithecus_coquereli
ENSPNYG00000002942	rad54l	99	79.706	ENSPNAG00000012483	rad54l	99	79.706	Pygocentrus_nattereri
ENSPNYG00000002942	rad54l	99	73.210	ENSRNOG00000013148	Rad54l	99	73.210	Rattus_norvegicus
ENSPNYG00000002942	rad54l	99	73.740	ENSRBIG00000043495	RAD54L	99	73.740	Rhinopithecus_bieti
ENSPNYG00000002942	rad54l	99	73.740	ENSRROG00000020844	RAD54L	99	73.740	Rhinopithecus_roxellana
ENSPNYG00000002942	rad54l	84	48.694	YGL163C	RAD54	71	48.848	Saccharomyces_cerevisiae
ENSPNYG00000002942	rad54l	99	74.005	ENSSBOG00000024672	RAD54L	99	74.005	Saimiri_boliviensis_boliviensis
ENSPNYG00000002942	rad54l	99	74.403	ENSSHAG00000000110	RAD54L	99	74.403	Sarcophilus_harrisii
ENSPNYG00000002942	rad54l	99	83.690	ENSSDUG00000019147	rad54l	99	83.690	Seriola_dumerili
ENSPNYG00000002942	rad54l	99	87.764	ENSSLDG00000012330	rad54l	99	87.764	Seriola_lalandi_dorsalis
ENSPNYG00000002942	rad54l	82	74.960	ENSSARG00000006689	RAD54L	99	74.960	Sorex_araneus
ENSPNYG00000002942	rad54l	98	82.796	ENSSPAG00000011016	rad54l	99	82.796	Stegastes_partitus
ENSPNYG00000002942	rad54l	99	73.475	ENSSSCG00000003905	RAD54L	99	73.475	Sus_scrofa
ENSPNYG00000002942	rad54l	99	75.464	ENSTGUG00000008233	RAD54L	99	76.330	Taeniopygia_guttata
ENSPNYG00000002942	rad54l	99	83.148	ENSTRUG00000008410	rad54l	100	82.869	Takifugu_rubripes
ENSPNYG00000002942	rad54l	99	77.793	ENSTNIG00000004716	rad54l	100	76.447	Tetraodon_nigroviridis
ENSPNYG00000002942	rad54l	99	70.993	ENSTTRG00000006315	RAD54L	99	70.993	Tursiops_truncatus
ENSPNYG00000002942	rad54l	98	72.933	ENSUAMG00000011824	RAD54L	99	72.933	Ursus_americanus
ENSPNYG00000002942	rad54l	98	71.733	ENSUMAG00000023603	RAD54L	99	71.733	Ursus_maritimus
ENSPNYG00000002942	rad54l	99	73.607	ENSVVUG00000007201	RAD54L	99	73.607	Vulpes_vulpes
ENSPNYG00000002942	rad54l	96	74.388	ENSXETG00000004369	rad54l	95	74.388	Xenopus_tropicalis
ENSPNYG00000002942	rad54l	52	78.086	ENSXCOG00000016028	rad54l	84	78.086	Xiphophorus_couchianus