EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000003098 (Gene tree)
Gene ID: 102207720
Gene Symbol: -
Alias: -
Full Name: poly(rC)-binding protein 4-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 20208 bases
Position: chrJH419305.1:1631068-1651275
Accession: 102207720
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000004038	KH_1	PF00013.29	4.6e-40	1	2
ENSPNYP00000004038	KH_1	PF00013.29	4.6e-40	2	2
ENSPNYP00000004038	KH_2	PF07650.17	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000004140	-	1287	XM_005740471	ENSPNYP00000004038	428 (aa)	XP_005740528	-

Gene Model

Click here to download ENSPNYG00000003098's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000003098's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000003098	-	94	75.355	ENSPNYG00000019234	pcbp4	95	75.592
ENSPNYG00000003098	-	85	55.287	ENSPNYG00000018792	pcbp2	98	55.786
ENSPNYG00000003098	-	71	58.896	ENSPNYG00000012326	pcbp3	93	58.896
ENSPNYG00000003098	-	74	55.786	ENSPNYG00000014206	PCBP2	98	55.786
ENSPNYG00000003098	-	75	57.784	ENSPNYG00000013205	-	97	57.784
ENSPNYG00000003098	-	67	31.944	ENSPNYG00000013607	-	65	31.944
ENSPNYG00000003098	-	72	56.637	ENSPNYG00000004637	zgc:110045	97	57.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000003098	-	98	53.587	ENSG00000090097	PCBP4	97	63.804	Homo_sapiens
ENSPNYG00000003098	-	51	87.500	ENSAPOG00000018462	-	67	87.500	Acanthochromis_polyacanthus
ENSPNYG00000003098	-	100	92.601	ENSAPOG00000009897	-	98	92.601	Acanthochromis_polyacanthus
ENSPNYG00000003098	-	97	54.005	ENSAMEG00000009211	PCBP4	97	54.897	Ailuropoda_melanoleuca
ENSPNYG00000003098	-	94	74.232	ENSACIG00000015264	pcbp4	94	73.982	Amphilophus_citrinellus
ENSPNYG00000003098	-	94	99.005	ENSACIG00000020434	-	97	99.005	Amphilophus_citrinellus
ENSPNYG00000003098	-	90	65.561	ENSAOCG00000006924	-	100	66.071	Amphiprion_ocellaris
ENSPNYG00000003098	-	100	97.196	ENSAOCG00000021366	-	100	97.196	Amphiprion_ocellaris
ENSPNYG00000003098	-	94	76.456	ENSAPEG00000023157	pcbp4	99	77.670	Amphiprion_percula
ENSPNYG00000003098	-	76	94.054	ENSAPEG00000009555	-	88	94.054	Amphiprion_percula
ENSPNYG00000003098	-	100	93.379	ENSATEG00000006511	-	100	93.379	Anabas_testudineus
ENSPNYG00000003098	-	94	70.488	ENSATEG00000008529	pcbp4	93	71.220	Anabas_testudineus
ENSPNYG00000003098	-	97	58.676	ENSACAG00000011701	PCBP4	97	58.447	Anolis_carolinensis
ENSPNYG00000003098	-	98	54.649	ENSANAG00000023072	PCBP4	99	55.305	Aotus_nancymaae
ENSPNYG00000003098	-	100	98.368	ENSACLG00000025246	-	100	98.368	Astatotilapia_calliptera
ENSPNYG00000003098	-	100	70.124	ENSACLG00000013348	pcbp4	96	70.600	Astatotilapia_calliptera
ENSPNYG00000003098	-	100	79.560	ENSAMXG00000033125	pcbp4	98	79.780	Astyanax_mexicanus
ENSPNYG00000003098	-	97	54.233	ENSBTAG00000018622	PCBP4	97	54.897	Bos_taurus
ENSPNYG00000003098	-	98	53.812	ENSCJAG00000005783	PCBP4	99	54.688	Callithrix_jacchus
ENSPNYG00000003098	-	97	54.005	ENSCAFG00000010019	PCBP4	97	54.897	Canis_familiaris
ENSPNYG00000003098	-	97	54.005	ENSCAFG00020022361	PCBP4	97	54.897	Canis_lupus_dingo
ENSPNYG00000003098	-	97	54.608	ENSCHIG00000012918	PCBP4	97	55.505	Capra_hircus
ENSPNYG00000003098	-	97	55.093	ENSTSYG00000008765	PCBP4	97	55.991	Carlito_syrichta
ENSPNYG00000003098	-	97	54.005	ENSCAPG00000005895	PCBP4	97	54.670	Cavia_aperea
ENSPNYG00000003098	-	97	54.005	ENSCPOG00000014617	PCBP4	97	54.897	Cavia_porcellus
ENSPNYG00000003098	-	98	53.915	ENSCCAG00000033268	PCBP4	99	54.788	Cebus_capucinus
ENSPNYG00000003098	-	98	54.279	ENSCATG00000032034	PCBP4	99	55.157	Cercocebus_atys
ENSPNYG00000003098	-	97	54.483	ENSCLAG00000008356	PCBP4	97	55.378	Chinchilla_lanigera
ENSPNYG00000003098	-	98	53.812	ENSCSAG00000013913	PCBP4	99	54.688	Chlorocebus_sabaeus
ENSPNYG00000003098	-	97	57.991	ENSCPBG00000016554	PCBP4	95	57.991	Chrysemys_picta_bellii
ENSPNYG00000003098	-	98	54.279	ENSCANG00000038865	PCBP4	99	55.157	Colobus_angolensis_palliatus
ENSPNYG00000003098	-	97	55.245	ENSCGRG00001014953	Pcbp4	97	56.148	Cricetulus_griseus_chok1gshd
ENSPNYG00000003098	-	97	55.245	ENSCGRG00000008617	Pcbp4	97	56.148	Cricetulus_griseus_crigri
ENSPNYG00000003098	-	100	86.499	ENSCSEG00000021041	PCBP4	100	86.499	Cynoglossus_semilaevis
ENSPNYG00000003098	-	100	65.762	ENSCSEG00000014487	pcbp4	95	67.223	Cynoglossus_semilaevis
ENSPNYG00000003098	-	100	91.553	ENSCVAG00000013090	-	100	91.121	Cyprinodon_variegatus
ENSPNYG00000003098	-	94	68.735	ENSCVAG00000003674	pcbp4	95	68.471	Cyprinodon_variegatus
ENSPNYG00000003098	-	100	78.194	ENSDARG00000024276	pcbp4	100	77.878	Danio_rerio
ENSPNYG00000003098	-	94	54.167	ENSDNOG00000033951	PCBP4	87	54.167	Dasypus_novemcinctus
ENSPNYG00000003098	-	97	53.547	ENSDORG00000000573	Pcbp4	97	54.670	Dipodomys_ordii
ENSPNYG00000003098	-	67	56.592	ENSETEG00000001778	PCBP4	96	56.592	Echinops_telfairi
ENSPNYG00000003098	-	97	53.776	ENSEASG00005012889	PCBP4	97	54.670	Equus_asinus_asinus
ENSPNYG00000003098	-	97	53.776	ENSECAG00000024218	PCBP4	97	54.670	Equus_caballus
ENSPNYG00000003098	-	100	71.613	ENSELUG00000018204	pcbp4	98	72.043	Esox_lucius
ENSPNYG00000003098	-	100	83.186	ENSELUG00000001870	-	98	82.080	Esox_lucius
ENSPNYG00000003098	-	97	54.005	ENSFCAG00000009148	PCBP4	97	54.897	Felis_catus
ENSPNYG00000003098	-	96	54.186	ENSFALG00000008831	PCBP4	95	55.116	Ficedula_albicollis
ENSPNYG00000003098	-	97	54.128	ENSFDAG00000012692	PCBP4	99	53.846	Fukomys_damarensis
ENSPNYG00000003098	-	94	69.652	ENSFHEG00000002769	-	97	69.652	Fundulus_heteroclitus
ENSPNYG00000003098	-	100	83.259	ENSGMOG00000017799	-	100	83.259	Gadus_morhua
ENSPNYG00000003098	-	97	54.110	ENSGALG00000027695	PCBP4	97	55.023	Gallus_gallus
ENSPNYG00000003098	-	82	88.556	ENSGAFG00000021090	-	76	90.730	Gambusia_affinis
ENSPNYG00000003098	-	100	86.607	ENSGACG00000002664	-	100	87.277	Gasterosteus_aculeatus
ENSPNYG00000003098	-	97	57.991	ENSGAGG00000022116	PCBP4	95	57.991	Gopherus_agassizii
ENSPNYG00000003098	-	98	53.587	ENSGGOG00000012474	PCBP4	99	54.464	Gorilla_gorilla
ENSPNYG00000003098	-	100	69.917	ENSHBUG00000009472	pcbp4	96	70.393	Haplochromis_burtoni
ENSPNYG00000003098	-	100	98.601	ENSHBUG00000005329	-	100	98.601	Haplochromis_burtoni
ENSPNYG00000003098	-	97	54.566	ENSHGLG00000012018	PCBP4	97	55.227	Heterocephalus_glaber_female
ENSPNYG00000003098	-	97	54.318	ENSHGLG00100008748	PCBP4	97	54.977	Heterocephalus_glaber_male
ENSPNYG00000003098	-	100	83.669	ENSHCOG00000010838	-	92	98.026	Hippocampus_comes
ENSPNYG00000003098	-	100	79.733	ENSIPUG00000008212	pcbp4	98	79.733	Ictalurus_punctatus
ENSPNYG00000003098	-	97	55.245	ENSSTOG00000002573	PCBP4	97	56.148	Ictidomys_tridecemlineatus
ENSPNYG00000003098	-	97	55.245	ENSJJAG00000016235	Pcbp4	97	56.148	Jaculus_jaculus
ENSPNYG00000003098	-	100	90.807	ENSKMAG00000017554	-	98	90.807	Kryptolebias_marmoratus
ENSPNYG00000003098	-	100	71.581	ENSKMAG00000014252	pcbp4	96	72.436	Kryptolebias_marmoratus
ENSPNYG00000003098	-	100	93.578	ENSLBEG00000011345	-	100	93.578	Labrus_bergylta
ENSPNYG00000003098	-	99	63.063	ENSLACG00000015899	PCBP4	90	73.684	Latimeria_chalumnae
ENSPNYG00000003098	-	100	77.009	ENSLOCG00000013402	pcbp4	98	77.506	Lepisosteus_oculatus
ENSPNYG00000003098	-	94	55.693	ENSLAFG00000010732	PCBP4	99	56.650	Loxodonta_africana
ENSPNYG00000003098	-	98	54.279	ENSMFAG00000001431	PCBP4	99	55.157	Macaca_fascicularis
ENSPNYG00000003098	-	98	54.279	ENSMMUG00000022205	PCBP4	99	55.157	Macaca_mulatta
ENSPNYG00000003098	-	98	54.279	ENSMNEG00000028553	PCBP4	99	55.157	Macaca_nemestrina
ENSPNYG00000003098	-	98	54.279	ENSMLEG00000027083	PCBP4	99	55.157	Mandrillus_leucophaeus
ENSPNYG00000003098	-	100	71.002	ENSMAMG00000010163	pcbp4	95	72.340	Mastacembelus_armatus
ENSPNYG00000003098	-	100	94.533	ENSMAMG00000011364	-	100	94.533	Mastacembelus_armatus
ENSPNYG00000003098	-	100	99.766	ENSMZEG00005023631	-	100	99.766	Maylandia_zebra
ENSPNYG00000003098	-	100	70.124	ENSMZEG00005008852	pcbp4	94	75.592	Maylandia_zebra
ENSPNYG00000003098	-	68	53.023	ENSMGAG00000003895	-	99	53.023	Meleagris_gallopavo
ENSPNYG00000003098	-	52	64.516	ENSMGAG00000005091	-	85	64.516	Meleagris_gallopavo
ENSPNYG00000003098	-	97	54.566	ENSMAUG00000021064	Pcbp4	97	55.227	Mesocricetus_auratus
ENSPNYG00000003098	-	97	54.338	ENSMICG00000002686	PCBP4	97	55.227	Microcebus_murinus
ENSPNYG00000003098	-	97	54.691	ENSMOCG00000013557	Pcbp4	97	55.581	Microtus_ochrogaster
ENSPNYG00000003098	-	70	62.701	ENSMMOG00000017756	pcbp4	92	62.701	Mola_mola
ENSPNYG00000003098	-	100	91.383	ENSMMOG00000020533	-	100	91.383	Mola_mola
ENSPNYG00000003098	-	97	54.462	ENSMODG00000011790	PCBP4	82	54.897	Monodelphis_domestica
ENSPNYG00000003098	-	92	95.178	ENSMALG00000022117	-	100	94.879	Monopterus_albus
ENSPNYG00000003098	-	91	73.913	ENSMALG00000020318	pcbp4	87	74.879	Monopterus_albus
ENSPNYG00000003098	-	97	54.233	MGP_CAROLIEiJ_G0032623	Pcbp4	93	65.761	Mus_caroli
ENSPNYG00000003098	-	97	54.233	ENSMUSG00000023495	Pcbp4	93	65.761	Mus_musculus
ENSPNYG00000003098	-	97	54.233	MGP_PahariEiJ_G0015491	Pcbp4	93	65.761	Mus_pahari
ENSPNYG00000003098	-	97	54.233	MGP_SPRETEiJ_G0033768	-	93	65.761	Mus_spretus
ENSPNYG00000003098	-	97	54.005	ENSMPUG00000011766	PCBP4	97	54.897	Mustela_putorius_furo
ENSPNYG00000003098	-	97	54.233	ENSNGAG00000013148	Pcbp4	99	54.813	Nannospalax_galili
ENSPNYG00000003098	-	100	99.533	ENSNBRG00000015885	-	100	99.533	Neolamprologus_brichardi
ENSPNYG00000003098	-	97	64.172	ENSNBRG00000007475	pcbp4	99	64.172	Neolamprologus_brichardi
ENSPNYG00000003098	-	98	54.279	ENSNLEG00000007064	PCBP4	99	55.157	Nomascus_leucogenys
ENSPNYG00000003098	-	96	48.132	ENSMEUG00000006917	PCBP4	97	48.571	Notamacropus_eugenii
ENSPNYG00000003098	-	94	51.357	ENSOPRG00000008763	PCBP4	97	52.027	Ochotona_princeps
ENSPNYG00000003098	-	97	54.110	ENSODEG00000018230	PCBP4	97	54.897	Octodon_degus
ENSPNYG00000003098	-	97	53.670	ENSOANG00000014110	PCBP4	94	54.110	Ornithorhynchus_anatinus
ENSPNYG00000003098	-	97	54.462	ENSOCUG00000025336	PCBP4	97	55.125	Oryctolagus_cuniculus
ENSPNYG00000003098	-	100	91.874	ENSORLG00000009899	-	100	91.874	Oryzias_latipes
ENSPNYG00000003098	-	100	68.211	ENSORLG00000003061	pcbp4	96	69.263	Oryzias_latipes
ENSPNYG00000003098	-	100	91.256	ENSORLG00020001183	-	100	89.640	Oryzias_latipes_hni
ENSPNYG00000003098	-	100	91.704	ENSORLG00015017819	-	98	91.704	Oryzias_latipes_hsok
ENSPNYG00000003098	-	100	67.223	ENSORLG00015019262	pcbp4	96	68.058	Oryzias_latipes_hsok
ENSPNYG00000003098	-	100	91.928	ENSOMEG00000011545	-	98	91.928	Oryzias_melastigma
ENSPNYG00000003098	-	100	65.885	ENSOMEG00000003516	-	100	66.977	Oryzias_melastigma
ENSPNYG00000003098	-	97	54.005	ENSOGAG00000032384	PCBP4	97	54.897	Otolemur_garnettii
ENSPNYG00000003098	-	94	55.693	ENSOARG00000006603	PCBP4	98	56.650	Ovis_aries
ENSPNYG00000003098	-	98	53.363	ENSPPAG00000038764	PCBP4	99	54.241	Pan_paniscus
ENSPNYG00000003098	-	97	54.005	ENSPPRG00000006165	PCBP4	97	54.897	Panthera_pardus
ENSPNYG00000003098	-	97	54.005	ENSPTIG00000005401	PCBP4	93	54.897	Panthera_tigris_altaica
ENSPNYG00000003098	-	98	53.587	ENSPTRG00000014983	PCBP4	99	54.464	Pan_troglodytes
ENSPNYG00000003098	-	98	54.279	ENSPANG00000026222	PCBP4	99	55.157	Papio_anubis
ENSPNYG00000003098	-	100	71.365	ENSPKIG00000005487	-	98	71.365	Paramormyrops_kingsleyae
ENSPNYG00000003098	-	100	79.866	ENSPKIG00000010244	pcbp4	100	81.075	Paramormyrops_kingsleyae
ENSPNYG00000003098	-	80	55.827	ENSPSIG00000011286	PCBP4	96	55.046	Pelodiscus_sinensis
ENSPNYG00000003098	-	94	73.775	ENSPMGG00000000063	pcbp4	96	73.775	Periophthalmus_magnuspinnatus
ENSPNYG00000003098	-	100	85.388	ENSPMGG00000022732	-	100	85.845	Periophthalmus_magnuspinnatus
ENSPNYG00000003098	-	97	54.587	ENSPEMG00000009276	Pcbp4	97	55.479	Peromyscus_maniculatus_bairdii
ENSPNYG00000003098	-	97	54.920	ENSPCIG00000018151	PCBP4	93	55.125	Phascolarctos_cinereus
ENSPNYG00000003098	-	97	66.964	ENSPFOG00000014474	pcbp4	96	81.818	Poecilia_formosa
ENSPNYG00000003098	-	100	90.359	ENSPFOG00000002989	-	98	90.359	Poecilia_formosa
ENSPNYG00000003098	-	95	64.103	ENSPLAG00000011438	-	98	64.103	Poecilia_latipinna
ENSPNYG00000003098	-	85	69.713	ENSPLAG00000023316	pcbp4	89	72.135	Poecilia_latipinna
ENSPNYG00000003098	-	64	61.433	ENSPMEG00000012990	pcbp4	100	64.214	Poecilia_mexicana
ENSPNYG00000003098	-	64	59.058	ENSPREG00000021498	-	75	59.058	Poecilia_reticulata
ENSPNYG00000003098	-	100	89.019	ENSPREG00000017370	-	100	89.019	Poecilia_reticulata
ENSPNYG00000003098	-	98	53.812	ENSPPYG00000013822	PCBP4	99	54.688	Pongo_abelii
ENSPNYG00000003098	-	94	52.174	ENSPCAG00000009515	PCBP4	97	52.632	Procavia_capensis
ENSPNYG00000003098	-	97	54.233	ENSPCOG00000027535	PCBP4	97	55.125	Propithecus_coquereli
ENSPNYG00000003098	-	94	49.451	ENSPVAG00000012474	PCBP4	97	49.891	Pteropus_vampyrus
ENSPNYG00000003098	-	100	79.956	ENSPNAG00000025434	pcbp4	98	80.176	Pygocentrus_nattereri
ENSPNYG00000003098	-	97	54.233	ENSRNOG00000012406	Pcbp4	97	55.125	Rattus_norvegicus
ENSPNYG00000003098	-	98	54.279	ENSRBIG00000043793	PCBP4	99	55.157	Rhinopithecus_bieti
ENSPNYG00000003098	-	98	54.279	ENSRROG00000034589	PCBP4	99	55.157	Rhinopithecus_roxellana
ENSPNYG00000003098	-	98	53.915	ENSSBOG00000027029	PCBP4	99	54.788	Saimiri_boliviensis_boliviensis
ENSPNYG00000003098	-	69	55.462	ENSSHAG00000007362	PCBP4	90	55.462	Sarcophilus_harrisii
ENSPNYG00000003098	-	100	71.269	ENSSFOG00015012075	PCBP4	98	71.047	Scleropages_formosus
ENSPNYG00000003098	-	75	83.766	ENSSFOG00015008221	pcbp4	60	83.766	Scleropages_formosus
ENSPNYG00000003098	-	100	93.256	ENSSMAG00000009392	-	100	93.256	Scophthalmus_maximus
ENSPNYG00000003098	-	100	70.316	ENSSMAG00000005827	pcbp4	94	71.368	Scophthalmus_maximus
ENSPNYG00000003098	-	100	97.196	ENSSDUG00000015540	-	100	97.196	Seriola_dumerili
ENSPNYG00000003098	-	94	76.998	ENSSDUG00000017719	pcbp4	97	78.019	Seriola_dumerili
ENSPNYG00000003098	-	55	84.713	ENSSLDG00000024847	-	69	84.713	Seriola_lalandi_dorsalis
ENSPNYG00000003098	-	100	97.196	ENSSLDG00000007851	-	100	97.196	Seriola_lalandi_dorsalis
ENSPNYG00000003098	-	97	53.917	ENSSPUG00000000194	PCBP4	97	54.147	Sphenodon_punctatus
ENSPNYG00000003098	-	86	63.990	ENSSPAG00000019058	-	92	64.767	Stegastes_partitus
ENSPNYG00000003098	-	100	92.601	ENSSPAG00000003033	-	100	92.290	Stegastes_partitus
ENSPNYG00000003098	-	97	54.005	ENSSSCG00000028446	PCBP4	97	54.897	Sus_scrofa
ENSPNYG00000003098	-	71	52.941	ENSTGUG00000006393	PCBP4	96	52.941	Taeniopygia_guttata
ENSPNYG00000003098	-	100	92.774	ENSTRUG00000007426	-	100	92.774	Takifugu_rubripes
ENSPNYG00000003098	-	100	81.839	ENSTNIG00000017887	-	99	81.839	Tetraodon_nigroviridis
ENSPNYG00000003098	-	85	39.163	ENSTBEG00000015770	PCBP4	100	39.951	Tupaia_belangeri
ENSPNYG00000003098	-	75	53.439	ENSTTRG00000001443	PCBP4	84	54.450	Tursiops_truncatus
ENSPNYG00000003098	-	98	50.342	ENSUAMG00000020871	PCBP4	100	55.200	Ursus_americanus
ENSPNYG00000003098	-	88	54.975	ENSUMAG00000021609	PCBP4	93	54.676	Ursus_maritimus
ENSPNYG00000003098	-	97	54.005	ENSVVUG00000026857	PCBP4	97	54.897	Vulpes_vulpes
ENSPNYG00000003098	-	87	84.097	ENSXCOG00000000111	-	100	84.097	Xiphophorus_couchianus
ENSPNYG00000003098	-	79	77.437	ENSXMAG00000015709	pcbp4	75	77.437	Xiphophorus_maculatus
ENSPNYG00000003098	-	90	67.488	ENSXMAG00000022188	-	90	69.779	Xiphophorus_maculatus
ENSPNYG00000003098	-	100	90.359	ENSXMAG00000024530	-	98	90.359	Xiphophorus_maculatus