EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000003138 (Gene tree)
Gene ID: -
Gene Symbol: oscp1a
Alias: oscp1|zgc:171454
Full Name: organic solute carrier partner 1a
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 2329 bases
Position: chrJH419298.1:471546-473874
Accession: ZDB-GENE-080204-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000004039	LSM	PF01423.22	6.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000004141	-	372	-	ENSPNYP00000004039	123 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000003138's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000003138's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000003138	oscp1a	59	33.333	ENSPNYG00000016794	lsm4	51	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000003138	oscp1a	96	66.102	ENSG00000181817	LSM10	96	66.102	Homo_sapiens
ENSPNYG00000003138	oscp1a	96	67.797	ENSAMEG00000019854	LSM10	96	67.797	Ailuropoda_melanoleuca
ENSPNYG00000003138	oscp1a	100	90.244	ENSACIG00000015420	oscp1a	81	90.244	Amphilophus_citrinellus
ENSPNYG00000003138	oscp1a	98	85.950	ENSAOCG00000014654	-	100	85.950	Amphiprion_ocellaris
ENSPNYG00000003138	oscp1a	98	85.950	ENSAOCG00000015618	LSM10	100	85.950	Amphiprion_ocellaris
ENSPNYG00000003138	oscp1a	86	85.185	ENSAOCG00000015607	LSM10	84	85.185	Amphiprion_ocellaris
ENSPNYG00000003138	oscp1a	98	85.950	ENSAPEG00000021845	-	100	85.950	Amphiprion_percula
ENSPNYG00000003138	oscp1a	86	85.185	ENSAPEG00000021851	LSM10	84	85.185	Amphiprion_percula
ENSPNYG00000003138	oscp1a	93	85.088	ENSATEG00000006310	oscp1a	84	85.088	Anabas_testudineus
ENSPNYG00000003138	oscp1a	93	60.000	ENSACAG00000001231	LSM10	93	60.000	Anolis_carolinensis
ENSPNYG00000003138	oscp1a	96	64.407	ENSANAG00000031489	-	97	64.407	Aotus_nancymaae
ENSPNYG00000003138	oscp1a	96	66.102	ENSANAG00000018759	-	96	66.102	Aotus_nancymaae
ENSPNYG00000003138	oscp1a	100	99.187	ENSACLG00000004728	oscp1a	100	99.187	Astatotilapia_calliptera
ENSPNYG00000003138	oscp1a	98	72.727	ENSAMXG00000025301	oscp1a	100	72.727	Astyanax_mexicanus
ENSPNYG00000003138	oscp1a	96	66.102	ENSBTAG00000024096	LSM10	97	66.102	Bos_taurus
ENSPNYG00000003138	oscp1a	96	66.949	ENSCJAG00000044880	LSM10	96	66.949	Callithrix_jacchus
ENSPNYG00000003138	oscp1a	96	67.797	ENSCAFG00000003382	LSM10	96	67.797	Canis_familiaris
ENSPNYG00000003138	oscp1a	96	67.797	ENSCAFG00020008920	LSM10	96	67.797	Canis_lupus_dingo
ENSPNYG00000003138	oscp1a	96	66.102	ENSCHIG00000009398	LSM10	97	66.102	Capra_hircus
ENSPNYG00000003138	oscp1a	96	68.644	ENSCAPG00000012567	LSM10	96	68.644	Cavia_aperea
ENSPNYG00000003138	oscp1a	96	68.644	ENSCPOG00000039302	LSM10	96	68.644	Cavia_porcellus
ENSPNYG00000003138	oscp1a	96	63.559	ENSCCAG00000008378	-	96	63.559	Cebus_capucinus
ENSPNYG00000003138	oscp1a	96	66.102	ENSCCAG00000018913	-	96	66.102	Cebus_capucinus
ENSPNYG00000003138	oscp1a	94	66.379	ENSCATG00000006589	LSM10	94	66.379	Cercocebus_atys
ENSPNYG00000003138	oscp1a	96	66.949	ENSCLAG00000008633	LSM10	96	66.949	Chinchilla_lanigera
ENSPNYG00000003138	oscp1a	94	66.379	ENSCSAG00000000134	LSM10	94	66.379	Chlorocebus_sabaeus
ENSPNYG00000003138	oscp1a	96	64.167	ENSCHOG00000008615	LSM10	96	64.167	Choloepus_hoffmanni
ENSPNYG00000003138	oscp1a	94	66.379	ENSCANG00000019928	LSM10	94	66.379	Colobus_angolensis_palliatus
ENSPNYG00000003138	oscp1a	86	62.963	ENSCGRG00001022673	-	88	62.963	Cricetulus_griseus_chok1gshd
ENSPNYG00000003138	oscp1a	94	67.241	ENSCGRG00001004317	-	95	67.241	Cricetulus_griseus_chok1gshd
ENSPNYG00000003138	oscp1a	86	62.963	ENSCGRG00000015514	-	88	62.963	Cricetulus_griseus_crigri
ENSPNYG00000003138	oscp1a	94	67.241	ENSCGRG00000014935	-	95	67.241	Cricetulus_griseus_crigri
ENSPNYG00000003138	oscp1a	98	85.000	ENSCSEG00000010374	oscp1a	81	85.000	Cynoglossus_semilaevis
ENSPNYG00000003138	oscp1a	96	78.814	ENSCVAG00000001536	oscp1a	89	78.814	Cyprinodon_variegatus
ENSPNYG00000003138	oscp1a	67	74.699	ENSDARG00000109563	CABZ01074453.1	96	74.699	Danio_rerio
ENSPNYG00000003138	oscp1a	96	76.271	ENSDARG00000101222	oscp1a	98	76.271	Danio_rerio
ENSPNYG00000003138	oscp1a	96	66.949	ENSDNOG00000036662	LSM10	96	66.949	Dasypus_novemcinctus
ENSPNYG00000003138	oscp1a	94	68.103	ENSDORG00000007579	Lsm10	94	68.103	Dipodomys_ordii
ENSPNYG00000003138	oscp1a	94	66.379	ENSETEG00000005703	LSM10	94	66.379	Echinops_telfairi
ENSPNYG00000003138	oscp1a	91	50.893	ENSEBUG00000001312	oscp1a	92	50.893	Eptatretus_burgeri
ENSPNYG00000003138	oscp1a	96	66.949	ENSEASG00005012194	LSM10	96	66.949	Equus_asinus_asinus
ENSPNYG00000003138	oscp1a	96	66.949	ENSECAG00000005071	LSM10	96	66.949	Equus_caballus
ENSPNYG00000003138	oscp1a	96	66.102	ENSEEUG00000012032	LSM10	96	66.102	Erinaceus_europaeus
ENSPNYG00000003138	oscp1a	96	84.746	ENSELUG00000007452	oscp1a	97	84.746	Esox_lucius
ENSPNYG00000003138	oscp1a	93	66.087	ENSFALG00000000851	LSM10	93	66.087	Ficedula_albicollis
ENSPNYG00000003138	oscp1a	96	67.797	ENSFDAG00000021056	LSM10	96	67.797	Fukomys_damarensis
ENSPNYG00000003138	oscp1a	92	79.825	ENSFHEG00000001058	oscp1a	98	79.825	Fundulus_heteroclitus
ENSPNYG00000003138	oscp1a	97	68.908	ENSGMOG00000019832	oscp1a	100	68.908	Gadus_morhua
ENSPNYG00000003138	oscp1a	95	65.812	ENSGALG00000002127	LSM10	95	65.812	Gallus_gallus
ENSPNYG00000003138	oscp1a	87	71.963	ENSGAFG00000016445	oscp1a	87	71.963	Gambusia_affinis
ENSPNYG00000003138	oscp1a	99	88.525	ENSGACG00000002329	oscp1a	100	88.525	Gasterosteus_aculeatus
ENSPNYG00000003138	oscp1a	94	63.793	ENSGAGG00000024848	LSM10	94	63.793	Gopherus_agassizii
ENSPNYG00000003138	oscp1a	96	66.102	ENSGGOG00000003556	LSM10	96	66.102	Gorilla_gorilla
ENSPNYG00000003138	oscp1a	100	100.000	ENSHBUG00000001722	oscp1a	100	100.000	Haplochromis_burtoni
ENSPNYG00000003138	oscp1a	96	66.949	ENSHGLG00000011625	LSM10	96	66.949	Heterocephalus_glaber_female
ENSPNYG00000003138	oscp1a	96	66.949	ENSHGLG00100001769	LSM10	96	66.949	Heterocephalus_glaber_male
ENSPNYG00000003138	oscp1a	88	72.222	ENSIPUG00000005808	oscp1a	94	72.222	Ictalurus_punctatus
ENSPNYG00000003138	oscp1a	96	67.797	ENSSTOG00000000606	LSM10	96	67.797	Ictidomys_tridecemlineatus
ENSPNYG00000003138	oscp1a	98	87.603	ENSKMAG00000012143	oscp1a	100	87.603	Kryptolebias_marmoratus
ENSPNYG00000003138	oscp1a	100	83.740	ENSLBEG00000017764	oscp1a	100	83.740	Labrus_bergylta
ENSPNYG00000003138	oscp1a	94	63.793	ENSLACG00000015904	LSM10	89	63.793	Latimeria_chalumnae
ENSPNYG00000003138	oscp1a	98	73.333	ENSLOCG00000018277	oscp1a	98	73.333	Lepisosteus_oculatus
ENSPNYG00000003138	oscp1a	94	67.241	ENSLAFG00000009600	LSM10	94	67.241	Loxodonta_africana
ENSPNYG00000003138	oscp1a	94	66.379	ENSMFAG00000009115	LSM10	94	66.379	Macaca_fascicularis
ENSPNYG00000003138	oscp1a	94	66.379	ENSMMUG00000017338	LSM10	94	66.379	Macaca_mulatta
ENSPNYG00000003138	oscp1a	94	66.379	ENSMNEG00000020023	LSM10	94	66.379	Macaca_nemestrina
ENSPNYG00000003138	oscp1a	94	66.379	ENSMLEG00000025150	LSM10	94	66.379	Mandrillus_leucophaeus
ENSPNYG00000003138	oscp1a	98	85.000	ENSMAMG00000004427	oscp1a	98	85.000	Mastacembelus_armatus
ENSPNYG00000003138	oscp1a	100	99.187	ENSMZEG00005026307	oscp1a	100	99.187	Maylandia_zebra
ENSPNYG00000003138	oscp1a	95	64.957	ENSMGAG00000015707	LSM10	95	64.957	Meleagris_gallopavo
ENSPNYG00000003138	oscp1a	94	68.103	ENSMAUG00000016624	Lsm10	95	68.103	Mesocricetus_auratus
ENSPNYG00000003138	oscp1a	94	67.241	ENSMOCG00000021943	Lsm10	95	67.241	Microtus_ochrogaster
ENSPNYG00000003138	oscp1a	93	87.719	ENSMMOG00000013597	oscp1a	85	87.719	Mola_mola
ENSPNYG00000003138	oscp1a	98	71.074	ENSMODG00000023328	LSM10	98	71.074	Monodelphis_domestica
ENSPNYG00000003138	oscp1a	54	83.333	ENSMALG00000012661	oscp1a	52	83.333	Monopterus_albus
ENSPNYG00000003138	oscp1a	94	67.241	MGP_CAROLIEiJ_G0026467	Lsm10	96	67.416	Mus_caroli
ENSPNYG00000003138	oscp1a	94	67.241	ENSMUSG00000050188	Lsm10	96	67.416	Mus_musculus
ENSPNYG00000003138	oscp1a	94	67.241	MGP_PahariEiJ_G0028798	Lsm10	96	67.416	Mus_pahari
ENSPNYG00000003138	oscp1a	94	67.241	MGP_SPRETEiJ_G0027446	Lsm10	96	67.416	Mus_spretus
ENSPNYG00000003138	oscp1a	96	67.797	ENSMPUG00000018593	LSM10	96	67.797	Mustela_putorius_furo
ENSPNYG00000003138	oscp1a	96	66.949	ENSMLUG00000023895	LSM10	96	66.949	Myotis_lucifugus
ENSPNYG00000003138	oscp1a	94	66.379	ENSNGAG00000015011	Lsm10	94	66.379	Nannospalax_galili
ENSPNYG00000003138	oscp1a	100	98.374	ENSNBRG00000014306	oscp1a	100	98.374	Neolamprologus_brichardi
ENSPNYG00000003138	oscp1a	96	66.102	ENSNLEG00000033754	LSM10	96	66.102	Nomascus_leucogenys
ENSPNYG00000003138	oscp1a	96	70.339	ENSMEUG00000006313	LSM10	96	70.339	Notamacropus_eugenii
ENSPNYG00000003138	oscp1a	94	68.103	ENSOPRG00000001699	LSM10	94	68.103	Ochotona_princeps
ENSPNYG00000003138	oscp1a	96	66.949	ENSODEG00000019161	LSM10	96	66.949	Octodon_degus
ENSPNYG00000003138	oscp1a	98	99.167	ENSONIG00000020904	oscp1a	98	99.167	Oreochromis_niloticus
ENSPNYG00000003138	oscp1a	98	68.595	ENSOANG00000002066	LSM10	98	68.595	Ornithorhynchus_anatinus
ENSPNYG00000003138	oscp1a	96	66.949	ENSOCUG00000005333	LSM10	96	66.949	Oryctolagus_cuniculus
ENSPNYG00000003138	oscp1a	98	82.645	ENSORLG00000009504	oscp1a	100	82.645	Oryzias_latipes
ENSPNYG00000003138	oscp1a	98	82.645	ENSORLG00020016201	oscp1a	100	82.645	Oryzias_latipes_hni
ENSPNYG00000003138	oscp1a	98	80.992	ENSORLG00015007794	oscp1a	100	80.992	Oryzias_latipes_hsok
ENSPNYG00000003138	oscp1a	96	67.797	ENSOGAG00000002653	LSM10	96	67.797	Otolemur_garnettii
ENSPNYG00000003138	oscp1a	96	66.102	ENSOARG00000009596	LSM10	97	66.102	Ovis_aries
ENSPNYG00000003138	oscp1a	96	66.102	ENSPPAG00000023465	LSM10	96	66.102	Pan_paniscus
ENSPNYG00000003138	oscp1a	96	66.949	ENSPPRG00000014619	LSM10	96	66.949	Panthera_pardus
ENSPNYG00000003138	oscp1a	96	66.949	ENSPTIG00000004613	LSM10	96	66.949	Panthera_tigris_altaica
ENSPNYG00000003138	oscp1a	96	66.102	ENSPTRG00000000539	LSM10	96	66.102	Pan_troglodytes
ENSPNYG00000003138	oscp1a	94	66.379	ENSPANG00000023172	LSM10	94	66.379	Papio_anubis
ENSPNYG00000003138	oscp1a	97	75.630	ENSPKIG00000003728	oscp1a	96	75.630	Paramormyrops_kingsleyae
ENSPNYG00000003138	oscp1a	94	62.931	ENSPSIG00000000590	LSM10	94	62.931	Pelodiscus_sinensis
ENSPNYG00000003138	oscp1a	62	72.368	ENSPMGG00000015718	oscp1a	99	72.368	Periophthalmus_magnuspinnatus
ENSPNYG00000003138	oscp1a	82	70.297	ENSPCIG00000014865	LSM10	74	70.297	Phascolarctos_cinereus
ENSPNYG00000003138	oscp1a	93	71.053	ENSPFOG00000020490	oscp1a	97	71.053	Poecilia_formosa
ENSPNYG00000003138	oscp1a	95	70.085	ENSPLAG00000016537	oscp1a	89	70.085	Poecilia_latipinna
ENSPNYG00000003138	oscp1a	92	69.027	ENSPMEG00000000174	oscp1a	98	69.027	Poecilia_mexicana
ENSPNYG00000003138	oscp1a	95	70.940	ENSPREG00000009899	oscp1a	89	70.940	Poecilia_reticulata
ENSPNYG00000003138	oscp1a	96	66.102	ENSPPYG00000001539	LSM10	96	66.102	Pongo_abelii
ENSPNYG00000003138	oscp1a	96	66.949	ENSPCAG00000002520	LSM10	97	66.949	Procavia_capensis
ENSPNYG00000003138	oscp1a	96	67.797	ENSPVAG00000008644	LSM10	96	67.797	Pteropus_vampyrus
ENSPNYG00000003138	oscp1a	98	79.339	ENSPNAG00000028829	oscp1a	100	79.339	Pygocentrus_nattereri
ENSPNYG00000003138	oscp1a	94	66.379	ENSRNOG00000025716	Lsm10	95	66.379	Rattus_norvegicus
ENSPNYG00000003138	oscp1a	94	66.379	ENSRBIG00000001561	LSM10	94	66.379	Rhinopithecus_bieti
ENSPNYG00000003138	oscp1a	94	66.379	ENSRROG00000011414	LSM10	94	66.379	Rhinopithecus_roxellana
ENSPNYG00000003138	oscp1a	96	66.102	ENSSBOG00000036413	-	96	66.102	Saimiri_boliviensis_boliviensis
ENSPNYG00000003138	oscp1a	96	70.339	ENSSHAG00000018056	LSM10	96	70.339	Sarcophilus_harrisii
ENSPNYG00000003138	oscp1a	96	72.034	ENSSFOG00015019954	lsm10	97	72.034	Scleropages_formosus
ENSPNYG00000003138	oscp1a	95	90.598	ENSSMAG00000001297	oscp1a	100	90.598	Scophthalmus_maximus
ENSPNYG00000003138	oscp1a	100	83.740	ENSSDUG00000007090	oscp1a	100	83.740	Seriola_dumerili
ENSPNYG00000003138	oscp1a	98	84.298	ENSSLDG00000000800	oscp1a	100	84.298	Seriola_lalandi_dorsalis
ENSPNYG00000003138	oscp1a	85	68.571	ENSSARG00000004211	LSM10	96	65.833	Sorex_araneus
ENSPNYG00000003138	oscp1a	98	90.083	ENSSPAG00000009229	oscp1a	100	90.083	Stegastes_partitus
ENSPNYG00000003138	oscp1a	96	66.102	ENSSSCG00000038916	LSM10	96	66.102	Sus_scrofa
ENSPNYG00000003138	oscp1a	94	65.517	ENSTGUG00000001600	-	95	65.517	Taeniopygia_guttata
ENSPNYG00000003138	oscp1a	94	66.379	ENSTGUG00000001602	-	95	66.379	Taeniopygia_guttata
ENSPNYG00000003138	oscp1a	96	80.508	ENSTRUG00000010531	oscp1a	95	80.508	Takifugu_rubripes
ENSPNYG00000003138	oscp1a	95	66.667	ENSTBEG00000016674	LSM10	95	66.667	Tupaia_belangeri
ENSPNYG00000003138	oscp1a	96	67.797	ENSUAMG00000020265	LSM10	96	67.797	Ursus_americanus
ENSPNYG00000003138	oscp1a	96	67.797	ENSUMAG00000001438	LSM10	54	67.797	Ursus_maritimus
ENSPNYG00000003138	oscp1a	96	67.797	ENSVVUG00000023209	LSM10	96	67.797	Vulpes_vulpes
ENSPNYG00000003138	oscp1a	96	64.407	ENSXETG00000027631	lsm10	96	64.407	Xenopus_tropicalis
ENSPNYG00000003138	oscp1a	96	69.492	ENSXCOG00000018776	oscp1a	74	69.492	Xiphophorus_couchianus
ENSPNYG00000003138	oscp1a	91	71.429	ENSXMAG00000019963	oscp1a	90	71.429	Xiphophorus_maculatus