EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000003183 (Gene tree)
Gene ID: 102200269
Gene Symbol: chd5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 33189 bases
Position: chrJH419239.1:903574-936762
Accession: 102200269
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000004292	ResIII	PF04851.15	7.5e-09	1	1
ENSPNYP00000004405	ResIII	PF04851.15	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000004400	-	5412	XM_005729670	ENSPNYP00000004292	1804 (aa)	XP_005729727	-
ENSPNYT00000004514	-	5601	-	ENSPNYP00000004405	1866 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000003183's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000003183's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000003183	chd5	95	68.433	ENSPNYG00000002663	chd4a	95	68.011
ENSPNYG00000003183	chd5	87	80.645	ENSPNYG00000023020	-	93	66.558

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000003183	chd5	99	76.959	ENSG00000116254	CHD5	96	81.456	Homo_sapiens
ENSPNYG00000003183	chd5	98	76.082	ENSAMEG00000009880	CHD5	95	77.778	Ailuropoda_melanoleuca
ENSPNYG00000003183	chd5	100	95.405	ENSACIG00000012582	chd5	100	95.405	Amphilophus_citrinellus
ENSPNYG00000003183	chd5	99	92.545	ENSAOCG00000020356	chd5	93	92.011	Amphiprion_ocellaris
ENSPNYG00000003183	chd5	95	73.068	ENSAPLG00000015475	CHD5	95	73.202	Anas_platyrhynchos
ENSPNYG00000003183	chd5	99	74.503	ENSACAG00000002441	CHD5	93	75.487	Anolis_carolinensis
ENSPNYG00000003183	chd5	92	75.172	ENSANAG00000001078	CHD5	91	78.363	Aotus_nancymaae
ENSPNYG00000003183	chd5	99	88.635	ENSACLG00000003012	chd5	100	88.635	Astatotilapia_calliptera
ENSPNYG00000003183	chd5	90	85.714	ENSAMXG00000008921	chd5	96	89.273	Astyanax_mexicanus
ENSPNYG00000003183	chd5	97	76.211	ENSBTAG00000040477	CHD5	99	78.311	Bos_taurus
ENSPNYG00000003183	chd5	98	76.327	ENSCJAG00000000101	CHD5	94	78.259	Callithrix_jacchus
ENSPNYG00000003183	chd5	96	77.996	ENSCAFG00000019545	CHD5	99	78.244	Canis_familiaris
ENSPNYG00000003183	chd5	98	78.213	ENSCAFG00020008689	CHD5	91	78.289	Canis_lupus_dingo
ENSPNYG00000003183	chd5	99	76.858	ENSCHIG00000015027	CHD5	91	78.870	Capra_hircus
ENSPNYG00000003183	chd5	98	73.803	ENSTSYG00000033991	CHD5	94	75.622	Carlito_syrichta
ENSPNYG00000003183	chd5	98	78.237	ENSCAPG00000009294	CHD5	95	78.277	Cavia_aperea
ENSPNYG00000003183	chd5	98	78.237	ENSCPOG00000025080	CHD5	95	78.277	Cavia_porcellus
ENSPNYG00000003183	chd5	89	87.149	ENSCCAG00000024756	CHD5	94	78.223	Cebus_capucinus
ENSPNYG00000003183	chd5	97	76.585	ENSCATG00000043011	CHD5	94	78.334	Cercocebus_atys
ENSPNYG00000003183	chd5	98	78.280	ENSCLAG00000010589	CHD5	95	78.242	Chinchilla_lanigera
ENSPNYG00000003183	chd5	98	76.544	ENSCSAG00000000733	CHD5	94	78.207	Chlorocebus_sabaeus
ENSPNYG00000003183	chd5	98	76.420	ENSCPBG00000019363	CHD5	99	76.944	Chrysemys_picta_bellii
ENSPNYG00000003183	chd5	98	77.086	ENSCANG00000032302	CHD5	94	78.261	Colobus_angolensis_palliatus
ENSPNYG00000003183	chd5	56	79.624	ENSCGRG00001011042	Chd5	95	81.169	Cricetulus_griseus_chok1gshd
ENSPNYG00000003183	chd5	99	76.802	ENSCGRG00000011341	Chd5	97	77.454	Cricetulus_griseus_crigri
ENSPNYG00000003183	chd5	95	67.542	ENSDARG00000025789	chd4b	93	67.266	Danio_rerio
ENSPNYG00000003183	chd5	99	85.071	ENSDARG00000105083	chd5	99	85.549	Danio_rerio
ENSPNYG00000003183	chd5	93	78.809	ENSDNOG00000046342	CHD5	89	80.392	Dasypus_novemcinctus
ENSPNYG00000003183	chd5	98	77.698	ENSDORG00000005923	Chd5	95	77.820	Dipodomys_ordii
ENSPNYG00000003183	chd5	89	89.450	ENSEASG00005021464	CHD5	94	86.792	Equus_asinus_asinus
ENSPNYG00000003183	chd5	89	89.450	ENSECAG00000025043	CHD5	96	85.477	Equus_caballus
ENSPNYG00000003183	chd5	68	86.385	ENSEEUG00000002772	CHD5	71	84.793	Erinaceus_europaeus
ENSPNYG00000003183	chd5	91	90.438	ENSELUG00000010742	chd5	94	90.438	Esox_lucius
ENSPNYG00000003183	chd5	98	76.911	ENSFCAG00000006319	CHD5	94	78.556	Felis_catus
ENSPNYG00000003183	chd5	98	75.959	ENSFALG00000009740	CHD5	94	76.627	Ficedula_albicollis
ENSPNYG00000003183	chd5	98	77.632	ENSFDAG00000012881	CHD5	92	78.611	Fukomys_damarensis
ENSPNYG00000003183	chd5	98	76.136	ENSGALG00000000747	CHD5	94	77.844	Gallus_gallus
ENSPNYG00000003183	chd5	59	91.933	ENSGACG00000004389	chd5	97	92.287	Gasterosteus_aculeatus
ENSPNYG00000003183	chd5	87	92.344	ENSGAGG00000001590	CHD5	98	84.167	Gopherus_agassizii
ENSPNYG00000003183	chd5	98	76.544	ENSGGOG00000000708	CHD5	95	78.452	Gorilla_gorilla
ENSPNYG00000003183	chd5	99	89.872	ENSHBUG00000013453	chd5	99	89.600	Haplochromis_burtoni
ENSPNYG00000003183	chd5	98	78.017	ENSHGLG00000018184	CHD5	97	77.844	Heterocephalus_glaber_female
ENSPNYG00000003183	chd5	98	71.259	ENSHGLG00100013261	CHD5	92	72.496	Heterocephalus_glaber_male
ENSPNYG00000003183	chd5	99	83.939	ENSIPUG00000005446	chd5	100	83.939	Ictalurus_punctatus
ENSPNYG00000003183	chd5	98	77.796	ENSSTOG00000002778	CHD5	95	77.977	Ictidomys_tridecemlineatus
ENSPNYG00000003183	chd5	98	77.961	ENSJJAG00000019072	Chd5	96	77.754	Jaculus_jaculus
ENSPNYG00000003183	chd5	99	83.015	ENSLOCG00000004944	chd5	93	82.350	Lepisosteus_oculatus
ENSPNYG00000003183	chd5	98	76.719	ENSLAFG00000006348	CHD5	100	76.487	Loxodonta_africana
ENSPNYG00000003183	chd5	98	76.490	ENSMFAG00000033993	CHD5	99	78.173	Macaca_fascicularis
ENSPNYG00000003183	chd5	97	77.772	ENSMMUG00000016838	CHD5	94	78.221	Macaca_mulatta
ENSPNYG00000003183	chd5	98	76.544	ENSMNEG00000040044	CHD5	94	78.207	Macaca_nemestrina
ENSPNYG00000003183	chd5	98	73.558	ENSMLEG00000039166	CHD5	95	75.134	Mandrillus_leucophaeus
ENSPNYG00000003183	chd5	98	95.368	ENSMZEG00005000841	chd5	96	94.701	Maylandia_zebra
ENSPNYG00000003183	chd5	98	76.201	ENSMGAG00000001055	CHD5	94	77.126	Meleagris_gallopavo
ENSPNYG00000003183	chd5	94	79.863	ENSMICG00000017862	CHD5	94	79.863	Microcebus_murinus
ENSPNYG00000003183	chd5	98	78.060	ENSMOCG00000011049	Chd5	96	77.217	Microtus_ochrogaster
ENSPNYG00000003183	chd5	75	86.957	ENSMODG00000006294	CHD5	72	78.538	Monodelphis_domestica
ENSPNYG00000003183	chd5	99	91.965	ENSMALG00000002831	chd5	98	90.330	Monopterus_albus
ENSPNYG00000003183	chd5	99	77.008	MGP_CAROLIEiJ_G0026857	Chd5	96	77.926	Mus_caroli
ENSPNYG00000003183	chd5	98	77.863	ENSMUSG00000005045	Chd5	96	77.406	Mus_musculus
ENSPNYG00000003183	chd5	99	76.919	MGP_PahariEiJ_G0029205	Chd5	94	77.226	Mus_pahari
ENSPNYG00000003183	chd5	99	77.263	MGP_SPRETEiJ_G0027850	Chd5	94	77.462	Mus_spretus
ENSPNYG00000003183	chd5	98	74.934	ENSMPUG00000007122	CHD5	95	74.699	Mustela_putorius_furo
ENSPNYG00000003183	chd5	99	76.834	ENSNGAG00000019812	Chd5	91	77.808	Nannospalax_galili
ENSPNYG00000003183	chd5	98	74.878	ENSNLEG00000010320	CHD5	95	76.095	Nomascus_leucogenys
ENSPNYG00000003183	chd5	86	74.180	ENSOPRG00000004304	CHD5	79	80.952	Ochotona_princeps
ENSPNYG00000003183	chd5	98	78.201	ENSODEG00000010262	CHD5	95	78.110	Octodon_degus
ENSPNYG00000003183	chd5	99	92.612	ENSONIG00000000619	chd5	96	92.612	Oreochromis_niloticus
ENSPNYG00000003183	chd5	98	66.558	ENSOANG00000001819	CHD5	96	65.910	Ornithorhynchus_anatinus
ENSPNYG00000003183	chd5	98	76.613	ENSOGAG00000005703	CHD5	94	77.862	Otolemur_garnettii
ENSPNYG00000003183	chd5	94	76.676	ENSOARG00000013425	CHD5	92	77.907	Ovis_aries
ENSPNYG00000003183	chd5	98	76.502	ENSPPAG00000034048	CHD5	95	78.517	Pan_paniscus
ENSPNYG00000003183	chd5	98	76.394	ENSPPRG00000009453	CHD5	93	77.947	Panthera_pardus
ENSPNYG00000003183	chd5	96	73.175	ENSPTIG00000013926	CHD5	95	73.607	Panthera_tigris_altaica
ENSPNYG00000003183	chd5	99	76.866	ENSPTRG00000000075	CHD5	94	78.517	Pan_troglodytes
ENSPNYG00000003183	chd5	98	76.544	ENSPANG00000006765	CHD5	94	78.207	Papio_anubis
ENSPNYG00000003183	chd5	94	83.267	ENSPKIG00000004282	chd5	95	82.831	Paramormyrops_kingsleyae
ENSPNYG00000003183	chd5	98	71.267	ENSPSIG00000006414	CHD5	98	71.023	Pelodiscus_sinensis
ENSPNYG00000003183	chd5	68	78.786	ENSPEMG00000014799	Chd5	96	79.953	Peromyscus_maniculatus_bairdii
ENSPNYG00000003183	chd5	99	77.505	ENSPCIG00000028310	CHD5	92	77.904	Phascolarctos_cinereus
ENSPNYG00000003183	chd5	99	88.179	ENSPLAG00000005343	chd5	99	88.179	Poecilia_latipinna
ENSPNYG00000003183	chd5	92	87.149	ENSPPYG00000001952	CHD5	95	81.944	Pongo_abelii
ENSPNYG00000003183	chd5	98	76.906	ENSPCOG00000022930	CHD5	94	78.703	Propithecus_coquereli
ENSPNYG00000003183	chd5	99	76.984	ENSRNOG00000011268	Chd5	96	77.937	Rattus_norvegicus
ENSPNYG00000003183	chd5	91	85.771	ENSRBIG00000032140	CHD5	93	82.324	Rhinopithecus_bieti
ENSPNYG00000003183	chd5	98	76.381	ENSRROG00000041146	CHD5	94	78.096	Rhinopithecus_roxellana
ENSPNYG00000003183	chd5	98	73.698	ENSSBOG00000001955	CHD5	99	79.331	Saimiri_boliviensis_boliviensis
ENSPNYG00000003183	chd5	98	71.452	ENSSHAG00000018641	CHD5	97	72.496	Sarcophilus_harrisii
ENSPNYG00000003183	chd5	99	84.035	ENSSFOG00015006296	chd5	91	87.413	Scleropages_formosus
ENSPNYG00000003183	chd5	99	91.169	ENSSDUG00000017526	chd5	95	96.400	Seriola_dumerili
ENSPNYG00000003183	chd5	92	87.698	ENSSPUG00000010622	CHD5	89	87.179	Sphenodon_punctatus
ENSPNYG00000003183	chd5	95	79.840	ENSSSCG00000003366	CHD5	99	78.611	Sus_scrofa
ENSPNYG00000003183	chd5	95	73.925	ENSTGUG00000002634	-	98	74.060	Taeniopygia_guttata
ENSPNYG00000003183	chd5	53	89.941	ENSTNIG00000004346	chd5	99	89.832	Tetraodon_nigroviridis
ENSPNYG00000003183	chd5	98	77.290	ENSTTRG00000010468	CHD5	94	77.507	Tursiops_truncatus
ENSPNYG00000003183	chd5	99	77.584	ENSUAMG00000024509	CHD5	93	84.545	Ursus_americanus
ENSPNYG00000003183	chd5	98	73.705	ENSUMAG00000024173	CHD5	95	75.069	Ursus_maritimus
ENSPNYG00000003183	chd5	84	92.000	ENSVVUG00000026480	CHD5	89	92.000	Vulpes_vulpes
ENSPNYG00000003183	chd5	98	73.635	ENSXETG00000002904	chd5	97	73.144	Xenopus_tropicalis
ENSPNYG00000003183	chd5	59	92.272	ENSXCOG00000014202	chd5	98	92.081	Xiphophorus_couchianus