EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000003258 (Gene tree)
Gene ID: 102194207
Gene Symbol: snrnp70
Alias: U1 small ribonucleoprotein 70kd|snrp70|wu:fc20b04|zgc:136450
Full Name: small nuclear ribonucleoprotein U1 subunit 70
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 8856 bases
Position: chrJH419457.1:492054-500909
Accession: 102194207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000004212	RRM_1	PF00076.22	1.3e-19	1	1
ENSPNYP00000004230	RRM_1	PF00076.22	4.4e-09	1	1
ENSPNYP00000004212	U1snRNP70_N	PF12220.8	6.7e-25	1	1
ENSPNYP00000004230	U1snRNP70_N	PF12220.8	6.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000004338	-	1428	-	ENSPNYP00000004230	475 (aa)	-	-
ENSPNYT00000004320	-	1739	XM_005749642	ENSPNYP00000004212	468 (aa)	XP_005749699	UPI0003AF86DB

Gene Model

Click here to download ENSPNYG00000003258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000003258's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000003258	snrnp70	100	88.511	ENSACIG00000017909	snrnp70	100	92.340	Amphilophus_citrinellus
ENSPNYG00000003258	snrnp70	100	80.467	ENSAPEG00000006219	snrnp70	100	85.412	Amphiprion_percula
ENSPNYG00000003258	snrnp70	100	85.684	ENSATEG00000008748	snrnp70	100	80.769	Anabas_testudineus
ENSPNYG00000003258	snrnp70	100	97.895	ENSACLG00000011144	snrnp70	100	97.895	Astatotilapia_calliptera
ENSPNYG00000003258	snrnp70	53	48.996	WBGene00004390	rnp-7	56	51.064	Caenorhabditis_elegans
ENSPNYG00000003258	snrnp70	100	70.064	ENSFHEG00000010298	snrnp70	100	71.762	Fundulus_heteroclitus
ENSPNYG00000003258	snrnp70	100	77.021	ENSGAFG00000003395	snrnp70	100	74.414	Gambusia_affinis
ENSPNYG00000003258	snrnp70	100	99.359	ENSHBUG00000018856	snrnp70	100	99.359	Haplochromis_burtoni
ENSPNYG00000003258	snrnp70	100	76.110	ENSHCOG00000010270	snrnp70	100	75.000	Hippocampus_comes
ENSPNYG00000003258	snrnp70	100	86.864	ENSMAMG00000004556	snrnp70	100	86.017	Mastacembelus_armatus
ENSPNYG00000003258	snrnp70	100	99.573	ENSMZEG00005022849	snrnp70	100	99.573	Maylandia_zebra
ENSPNYG00000003258	snrnp70	53	74.319	ENSMICG00000038437	SNRNP70	99	88.415	Microcebus_murinus
ENSPNYG00000003258	snrnp70	74	91.304	ENSMALG00000002275	snrnp70	90	86.652	Monopterus_albus
ENSPNYG00000003258	snrnp70	51	73.705	ENSNLEG00000004899	SNRNP70	87	91.705	Nomascus_leucogenys
ENSPNYG00000003258	snrnp70	99	88.323	ENSONIG00000007822	snrnp70	100	88.323	Oreochromis_niloticus
ENSPNYG00000003258	snrnp70	100	77.331	ENSORLG00000017158	snrnp70	100	81.818	Oryzias_latipes
ENSPNYG00000003258	snrnp70	100	77.542	ENSORLG00015010817	snrnp70	100	82.030	Oryzias_latipes_hsok
ENSPNYG00000003258	snrnp70	100	84.402	ENSOMEG00000013002	snrnp70	100	84.402	Oryzias_melastigma
ENSPNYG00000003258	snrnp70	100	76.546	ENSPFOG00000016671	snrnp70	100	80.171	Poecilia_formosa
ENSPNYG00000003258	snrnp70	100	76.333	ENSPLAG00000005912	snrnp70	100	79.957	Poecilia_latipinna
ENSPNYG00000003258	snrnp70	100	76.546	ENSPMEG00000008496	snrnp70	100	80.171	Poecilia_mexicana
ENSPNYG00000003258	snrnp70	100	76.333	ENSPREG00000005486	snrnp70	100	79.957	Poecilia_reticulata
ENSPNYG00000003258	snrnp70	100	75.159	ENSSMAG00000013978	snrnp70	100	77.846	Scophthalmus_maximus
ENSPNYG00000003258	snrnp70	53	76.357	ENSSPUG00000016621	SNRNP70	64	82.900	Sphenodon_punctatus
ENSPNYG00000003258	snrnp70	100	81.450	ENSTRUG00000009202	snrnp70	100	74.359	Takifugu_rubripes
ENSPNYG00000003258	snrnp70	100	77.282	ENSXMAG00000012789	snrnp70	100	79.830	Xiphophorus_maculatus