EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000003358 (Gene tree)
Gene ID: 102215018
Gene Symbol: cnot3b
Alias: cnot3|wu:fi20g07|zgc:55934
Full Name: CCR4-NOT transcription complex subunit 3-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 30455 bases
Position: chrJH419360.1:1151033-1181487
Accession: 102215018
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000004600	Not3	PF04065.15	3.3e-93	1	1
ENSPNYP00000004591	Not3	PF04065.15	3.7e-93	1	1
ENSPNYP00000004619	Not3	PF04065.15	3.9e-88	1	1
ENSPNYP00000004600	NOT2_3_5	PF04153.18	1.1e-34	1	1
ENSPNYP00000004591	NOT2_3_5	PF04153.18	3e-18	1	1
ENSPNYP00000004619	NOT2_3_5	PF04153.18	4.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000004706	-	2787	-	ENSPNYP00000004591	928 (aa)	-	-
ENSPNYT00000004736	-	2445	-	ENSPNYP00000004619	814 (aa)	-	-
ENSPNYT00000004717	-	2607	XM_013913859	ENSPNYP00000004600	868 (aa)	XP_013769313	-

Gene Model

Click here to download ENSPNYG00000003358's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000003358's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000003358	cnot3b	57	86.755	ENSG00000088038	CNOT3	98	93.229	Homo_sapiens
ENSPNYG00000003358	cnot3b	68	84.052	ENSAPOG00000015002	cnot3b	100	84.052	Acanthochromis_polyacanthus
ENSPNYG00000003358	cnot3b	64	67.647	ENSAPOG00000015499	CNOT3	86	82.671	Acanthochromis_polyacanthus
ENSPNYG00000003358	cnot3b	57	87.086	ENSAMEG00000004528	CNOT3	69	86.799	Ailuropoda_melanoleuca
ENSPNYG00000003358	cnot3b	65	98.157	ENSACIG00000003652	cnot3b	98	98.157	Amphilophus_citrinellus
ENSPNYG00000003358	cnot3b	50	94.397	ENSACIG00000006635	cnot3a	99	94.397	Amphilophus_citrinellus
ENSPNYG00000003358	cnot3b	97	79.954	ENSAOCG00000018385	-	100	79.496	Amphiprion_ocellaris
ENSPNYG00000003358	cnot3b	97	81.860	ENSAPEG00000002640	cnot3b	99	97.143	Amphiprion_percula
ENSPNYG00000003358	cnot3b	99	78.205	ENSATEG00000015777	cnot3b	99	78.419	Anabas_testudineus
ENSPNYG00000003358	cnot3b	99	60.281	ENSATEG00000022737	cnot3a	99	61.249	Anabas_testudineus
ENSPNYG00000003358	cnot3b	88	74.429	ENSACAG00000016085	CNOT3	88	85.574	Anolis_carolinensis
ENSPNYG00000003358	cnot3b	79	86.755	ENSANAG00000025756	CNOT3	96	86.469	Aotus_nancymaae
ENSPNYG00000003358	cnot3b	99	89.119	ENSACLG00000016702	cnot3b	99	88.792	Astatotilapia_calliptera
ENSPNYG00000003358	cnot3b	99	63.850	ENSAMXG00000009447	cnot3b	97	76.344	Astyanax_mexicanus
ENSPNYG00000003358	cnot3b	99	61.530	ENSAMXG00000012359	cnot3a	99	62.860	Astyanax_mexicanus
ENSPNYG00000003358	cnot3b	57	86.755	ENSBTAG00000014900	CNOT3	96	86.469	Bos_taurus
ENSPNYG00000003358	cnot3b	51	53.125	WBGene00003826	ntl-3	81	53.125	Caenorhabditis_elegans
ENSPNYG00000003358	cnot3b	57	86.755	ENSCJAG00000001094	CNOT3	99	86.469	Callithrix_jacchus
ENSPNYG00000003358	cnot3b	57	86.184	ENSCAFG00000002699	CNOT3	96	86.469	Canis_familiaris
ENSPNYG00000003358	cnot3b	57	86.184	ENSCAFG00020018359	CNOT3	96	86.469	Canis_lupus_dingo
ENSPNYG00000003358	cnot3b	56	87.075	ENSCHIG00000015302	CNOT3	95	86.780	Capra_hircus
ENSPNYG00000003358	cnot3b	57	86.755	ENSTSYG00000008058	CNOT3	69	86.469	Carlito_syrichta
ENSPNYG00000003358	cnot3b	95	74.801	ENSCAPG00000009533	CNOT3	69	86.469	Cavia_aperea
ENSPNYG00000003358	cnot3b	95	74.801	ENSCPOG00000020741	CNOT3	69	86.469	Cavia_porcellus
ENSPNYG00000003358	cnot3b	79	86.755	ENSCCAG00000036290	CNOT3	96	86.469	Cebus_capucinus
ENSPNYG00000003358	cnot3b	66	75.799	ENSCATG00000030324	CNOT3	96	86.469	Cercocebus_atys
ENSPNYG00000003358	cnot3b	57	86.755	ENSCLAG00000003302	CNOT3	100	86.585	Chinchilla_lanigera
ENSPNYG00000003358	cnot3b	57	86.755	ENSCSAG00000001900	CNOT3	96	86.469	Chlorocebus_sabaeus
ENSPNYG00000003358	cnot3b	81	67.904	ENSCPBG00000011655	CNOT3	88	87.129	Chrysemys_picta_bellii
ENSPNYG00000003358	cnot3b	51	65.289	ENSCING00000000293	-	68	65.289	Ciona_intestinalis
ENSPNYG00000003358	cnot3b	57	86.755	ENSCANG00000013408	CNOT3	96	86.469	Colobus_angolensis_palliatus
ENSPNYG00000003358	cnot3b	66	75.342	ENSCGRG00001000855	Cnot3	69	86.139	Cricetulus_griseus_chok1gshd
ENSPNYG00000003358	cnot3b	54	51.796	ENSCSEG00000003574	cnot3a	99	59.873	Cynoglossus_semilaevis
ENSPNYG00000003358	cnot3b	92	75.463	ENSCSEG00000016892	cnot3b	99	63.348	Cynoglossus_semilaevis
ENSPNYG00000003358	cnot3b	99	70.639	ENSCVAG00000022122	cnot3b	99	73.160	Cyprinodon_variegatus
ENSPNYG00000003358	cnot3b	99	63.141	ENSDARG00000019842	cnot3b	99	65.652	Danio_rerio
ENSPNYG00000003358	cnot3b	99	60.574	ENSDARG00000007135	cnot3a	99	62.407	Danio_rerio
ENSPNYG00000003358	cnot3b	57	86.424	ENSDNOG00000045972	CNOT3	69	86.139	Dasypus_novemcinctus
ENSPNYG00000003358	cnot3b	57	86.755	ENSDORG00000008021	Cnot3	100	81.609	Dipodomys_ordii
ENSPNYG00000003358	cnot3b	54	73.626	ENSEBUG00000010437	cnot3a	62	72.868	Eptatretus_burgeri
ENSPNYG00000003358	cnot3b	57	86.755	ENSEASG00005021591	CNOT3	96	86.469	Equus_asinus_asinus
ENSPNYG00000003358	cnot3b	57	86.755	ENSECAG00000023181	CNOT3	96	86.469	Equus_caballus
ENSPNYG00000003358	cnot3b	99	65.854	ENSELUG00000000953	cnot3b	99	65.745	Esox_lucius
ENSPNYG00000003358	cnot3b	99	60.778	ENSELUG00000014743	cnot3a	99	60.147	Esox_lucius
ENSPNYG00000003358	cnot3b	82	86.755	ENSFCAG00000014042	CNOT3	99	86.469	Felis_catus
ENSPNYG00000003358	cnot3b	99	58.651	ENSFHEG00000023166	cnot3a	97	94.828	Fundulus_heteroclitus
ENSPNYG00000003358	cnot3b	99	69.947	ENSFHEG00000001696	cnot3b	99	72.133	Fundulus_heteroclitus
ENSPNYG00000003358	cnot3b	99	56.335	ENSGMOG00000005365	cnot3a	99	55.769	Gadus_morhua
ENSPNYG00000003358	cnot3b	99	71.753	ENSGAFG00000003459	cnot3b	99	71.676	Gambusia_affinis
ENSPNYG00000003358	cnot3b	82	66.882	ENSGAGG00000012677	CNOT3	99	88.552	Gopherus_agassizii
ENSPNYG00000003358	cnot3b	86	86.755	ENSGGOG00000012996	CNOT3	96	86.469	Gorilla_gorilla
ENSPNYG00000003358	cnot3b	100	92.351	ENSHBUG00000019699	cnot3b	100	92.351	Haplochromis_burtoni
ENSPNYG00000003358	cnot3b	57	86.755	ENSHGLG00000008821	CNOT3	100	81.609	Heterocephalus_glaber_female
ENSPNYG00000003358	cnot3b	50	93.392	ENSHGLG00100006181	CNOT3	100	81.609	Heterocephalus_glaber_male
ENSPNYG00000003358	cnot3b	99	60.261	ENSHCOG00000020968	cnot3a	99	60.622	Hippocampus_comes
ENSPNYG00000003358	cnot3b	99	59.389	ENSIPUG00000000167	cnot3	99	72.222	Ictalurus_punctatus
ENSPNYG00000003358	cnot3b	99	65.385	ENSIPUG00000009046	cnot3b	99	64.403	Ictalurus_punctatus
ENSPNYG00000003358	cnot3b	57	86.755	ENSSTOG00000028248	CNOT3	69	86.469	Ictidomys_tridecemlineatus
ENSPNYG00000003358	cnot3b	57	85.855	ENSJJAG00000014594	Cnot3	99	86.139	Jaculus_jaculus
ENSPNYG00000003358	cnot3b	99	74.865	ENSKMAG00000018723	cnot3b	99	78.007	Kryptolebias_marmoratus
ENSPNYG00000003358	cnot3b	99	59.936	ENSKMAG00000004863	cnot3a	99	70.149	Kryptolebias_marmoratus
ENSPNYG00000003358	cnot3b	55	90.476	ENSLBEG00000017296	cnot3a	69	90.288	Labrus_bergylta
ENSPNYG00000003358	cnot3b	96	73.363	ENSLBEG00000018278	cnot3b	99	73.030	Labrus_bergylta
ENSPNYG00000003358	cnot3b	59	85.526	ENSLACG00000009742	CNOT3	98	85.809	Latimeria_chalumnae
ENSPNYG00000003358	cnot3b	57	85.809	ENSLAFG00000022133	CNOT3	69	85.526	Loxodonta_africana
ENSPNYG00000003358	cnot3b	66	75.799	ENSMFAG00000040073	CNOT3	96	86.469	Macaca_fascicularis
ENSPNYG00000003358	cnot3b	51	91.525	ENSMMUG00000009698	CNOT3	97	94.949	Macaca_mulatta
ENSPNYG00000003358	cnot3b	66	74.429	ENSMNEG00000036750	CNOT3	96	86.469	Macaca_nemestrina
ENSPNYG00000003358	cnot3b	66	71.684	ENSMLEG00000036579	CNOT3	96	86.469	Mandrillus_leucophaeus
ENSPNYG00000003358	cnot3b	99	77.263	ENSMAMG00000019357	cnot3b	99	78.879	Mastacembelus_armatus
ENSPNYG00000003358	cnot3b	99	89.520	ENSMZEG00005002466	cnot3b	99	89.520	Maylandia_zebra
ENSPNYG00000003358	cnot3b	66	75.342	ENSMAUG00000014996	Cnot3	69	86.139	Mesocricetus_auratus
ENSPNYG00000003358	cnot3b	57	86.184	ENSMICG00000002370	CNOT3	99	86.469	Microcebus_murinus
ENSPNYG00000003358	cnot3b	68	92.241	ENSMMOG00000013086	cnot3b	99	92.241	Mola_mola
ENSPNYG00000003358	cnot3b	57	86.755	ENSMODG00000004066	CNOT3	70	86.469	Monodelphis_domestica
ENSPNYG00000003358	cnot3b	99	59.827	ENSMALG00000009204	cnot3a	99	60.557	Monopterus_albus
ENSPNYG00000003358	cnot3b	80	94.444	ENSMALG00000004936	cnot3b	72	93.750	Monopterus_albus
ENSPNYG00000003358	cnot3b	72	74.074	MGP_CAROLIEiJ_G0029095	Cnot3	97	93.878	Mus_caroli
ENSPNYG00000003358	cnot3b	72	74.074	ENSMUSG00000035632	Cnot3	97	93.878	Mus_musculus
ENSPNYG00000003358	cnot3b	72	74.074	MGP_PahariEiJ_G0020964	Cnot3	97	93.878	Mus_pahari
ENSPNYG00000003358	cnot3b	72	74.074	MGP_SPRETEiJ_G0030148	Cnot3	97	93.878	Mus_spretus
ENSPNYG00000003358	cnot3b	57	86.755	ENSMPUG00000010352	CNOT3	99	86.469	Mustela_putorius_furo
ENSPNYG00000003358	cnot3b	66	75.799	ENSNGAG00000013266	Cnot3	99	86.469	Nannospalax_galili
ENSPNYG00000003358	cnot3b	80	94.834	ENSNBRG00000003336	cnot3b	99	93.805	Neolamprologus_brichardi
ENSPNYG00000003358	cnot3b	51	86.755	ENSNLEG00000006272	CNOT3	67	86.469	Nomascus_leucogenys
ENSPNYG00000003358	cnot3b	94	71.722	ENSODEG00000000705	CNOT3	100	89.873	Octodon_degus
ENSPNYG00000003358	cnot3b	99	86.275	ENSONIG00000007047	cnot3b	99	86.057	Oreochromis_niloticus
ENSPNYG00000003358	cnot3b	57	86.755	ENSOCUG00000007691	CNOT3	96	86.469	Oryctolagus_cuniculus
ENSPNYG00000003358	cnot3b	99	73.348	ENSORLG00000005982	cnot3b	99	73.781	Oryzias_latipes
ENSPNYG00000003358	cnot3b	99	73.210	ENSORLG00020005779	cnot3b	99	73.753	Oryzias_latipes_hni
ENSPNYG00000003358	cnot3b	99	72.845	ENSORLG00015019021	cnot3b	99	73.276	Oryzias_latipes_hsok
ENSPNYG00000003358	cnot3b	99	73.326	ENSOMEG00000015557	cnot3b	99	73.758	Oryzias_melastigma
ENSPNYG00000003358	cnot3b	86	91.007	ENSOMEG00000010309	cnot3a	96	91.007	Oryzias_melastigma
ENSPNYG00000003358	cnot3b	57	86.755	ENSOGAG00000006945	CNOT3	69	86.469	Otolemur_garnettii
ENSPNYG00000003358	cnot3b	86	86.755	ENSPPAG00000002748	CNOT3	96	86.469	Pan_paniscus
ENSPNYG00000003358	cnot3b	82	86.755	ENSPPRG00000011705	CNOT3	99	86.469	Panthera_pardus
ENSPNYG00000003358	cnot3b	62	79.822	ENSPTIG00000008781	CNOT3	85	92.058	Panthera_tigris_altaica
ENSPNYG00000003358	cnot3b	86	86.755	ENSPTRG00000046717	-	96	86.469	Pan_troglodytes
ENSPNYG00000003358	cnot3b	86	86.755	ENSPTRG00000011444	CNOT3	96	86.469	Pan_troglodytes
ENSPNYG00000003358	cnot3b	66	75.799	ENSPANG00000009375	CNOT3	96	86.469	Papio_anubis
ENSPNYG00000003358	cnot3b	97	63.544	ENSPKIG00000015967	-	99	94.397	Paramormyrops_kingsleyae
ENSPNYG00000003358	cnot3b	98	65.984	ENSPMGG00000022539	cnot3b	99	67.687	Periophthalmus_magnuspinnatus
ENSPNYG00000003358	cnot3b	66	75.342	ENSPEMG00000024185	Cnot3	69	86.139	Peromyscus_maniculatus_bairdii
ENSPNYG00000003358	cnot3b	66	86.424	ENSPCIG00000023018	CNOT3	99	86.139	Phascolarctos_cinereus
ENSPNYG00000003358	cnot3b	99	72.108	ENSPFOG00000007168	cnot3b	99	72.108	Poecilia_formosa
ENSPNYG00000003358	cnot3b	53	90.873	ENSPFOG00000008693	cnot3a	91	90.873	Poecilia_formosa
ENSPNYG00000003358	cnot3b	99	72.108	ENSPLAG00000013457	cnot3b	99	72.108	Poecilia_latipinna
ENSPNYG00000003358	cnot3b	99	73.405	ENSPMEG00000010184	cnot3b	99	72.324	Poecilia_mexicana
ENSPNYG00000003358	cnot3b	53	60.566	ENSPREG00000000766	-	99	65.690	Poecilia_reticulata
ENSPNYG00000003358	cnot3b	68	85.768	ENSPREG00000007592	cnot3a	99	88.583	Poecilia_reticulata
ENSPNYG00000003358	cnot3b	98	66.630	ENSPREG00000000662	cnot3b	99	66.523	Poecilia_reticulata
ENSPNYG00000003358	cnot3b	57	86.424	ENSPPYG00000010372	CNOT3	96	86.139	Pongo_abelii
ENSPNYG00000003358	cnot3b	53	96.774	ENSPCAG00000011999	CNOT3	52	96.774	Procavia_capensis
ENSPNYG00000003358	cnot3b	57	86.755	ENSPCOG00000017673	CNOT3	99	86.469	Propithecus_coquereli
ENSPNYG00000003358	cnot3b	57	85.762	ENSPVAG00000015564	CNOT3	69	85.479	Pteropus_vampyrus
ENSPNYG00000003358	cnot3b	99	67.098	ENSPNAG00000027459	cnot3b	99	67.535	Pygocentrus_nattereri
ENSPNYG00000003358	cnot3b	79	83.688	ENSPNAG00000017679	cnot3a	94	93.277	Pygocentrus_nattereri
ENSPNYG00000003358	cnot3b	72	74.074	ENSRNOG00000053234	Cnot3	69	86.139	Rattus_norvegicus
ENSPNYG00000003358	cnot3b	57	86.755	ENSRBIG00000031025	CNOT3	96	86.469	Rhinopithecus_bieti
ENSPNYG00000003358	cnot3b	57	86.755	ENSRROG00000003872	CNOT3	96	86.469	Rhinopithecus_roxellana
ENSPNYG00000003358	cnot3b	53	33.750	YPR072W	-	55	39.506	Saccharomyces_cerevisiae
ENSPNYG00000003358	cnot3b	79	86.755	ENSSBOG00000030268	CNOT3	99	86.469	Saimiri_boliviensis_boliviensis
ENSPNYG00000003358	cnot3b	98	78.082	ENSSFOG00015000248	cnot3	91	78.082	Scleropages_formosus
ENSPNYG00000003358	cnot3b	99	63.558	ENSSFOG00015019203	-	99	63.164	Scleropages_formosus
ENSPNYG00000003358	cnot3b	99	73.830	ENSSMAG00000016031	cnot3b	99	74.681	Scophthalmus_maximus
ENSPNYG00000003358	cnot3b	99	79.296	ENSSDUG00000003428	cnot3b	99	80.149	Seriola_dumerili
ENSPNYG00000003358	cnot3b	50	94.828	ENSSDUG00000008181	cnot3a	92	94.828	Seriola_dumerili
ENSPNYG00000003358	cnot3b	99	79.189	ENSSLDG00000014376	cnot3b	99	79.402	Seriola_lalandi_dorsalis
ENSPNYG00000003358	cnot3b	71	72.685	ENSSPUG00000008510	CNOT3	72	86.469	Sphenodon_punctatus
ENSPNYG00000003358	cnot3b	80	88.889	ENSSPAG00000003858	cnot3a	95	91.007	Stegastes_partitus
ENSPNYG00000003358	cnot3b	99	78.648	ENSSPAG00000001429	cnot3b	99	78.541	Stegastes_partitus
ENSPNYG00000003358	cnot3b	57	86.755	ENSSSCG00000003264	CNOT3	69	86.469	Sus_scrofa
ENSPNYG00000003358	cnot3b	99	80.105	ENSTRUG00000007248	cnot3b	91	80.952	Takifugu_rubripes
ENSPNYG00000003358	cnot3b	99	60.846	ENSTRUG00000015732	cnot3a	99	60.557	Takifugu_rubripes
ENSPNYG00000003358	cnot3b	97	67.637	ENSTNIG00000005663	cnot3b	99	70.824	Tetraodon_nigroviridis
ENSPNYG00000003358	cnot3b	57	87.086	ENSUAMG00000005234	CNOT3	96	86.799	Ursus_americanus
ENSPNYG00000003358	cnot3b	56	91.039	ENSUMAG00000010934	CNOT3	90	91.039	Ursus_maritimus
ENSPNYG00000003358	cnot3b	57	86.755	ENSVVUG00000008239	CNOT3	95	86.469	Vulpes_vulpes
ENSPNYG00000003358	cnot3b	68	71.759	ENSXETG00000003166	cnot3	97	85.342	Xenopus_tropicalis
ENSPNYG00000003358	cnot3b	96	69.457	ENSXCOG00000018976	cnot3b	99	71.008	Xiphophorus_couchianus
ENSPNYG00000003358	cnot3b	88	87.960	ENSXCOG00000019460	cnot3a	97	94.397	Xiphophorus_couchianus
ENSPNYG00000003358	cnot3b	99	71.121	ENSXMAG00000014176	cnot3b	99	72.276	Xiphophorus_maculatus