EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000003528 (Gene tree)
Gene ID: 102211381
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 23918 bases
Position: chrJH419690.1:2412-26329
Accession: 102211381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000004618	CPSF_A	PF03178.15	2.2e-99	1	1
ENSPNYP00000004642	CPSF_A	PF03178.15	9e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000004735	-	5288	XM_005753949	ENSPNYP00000004618	1217 (aa)	XP_005754006	UPI0003AFB572
ENSPNYT00000004760	-	3264	-	ENSPNYP00000004642	1087 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000003528's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000003528's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000003528	sf3b3	100	93.180	ENSG00000189091	SF3B3	100	98.246	Homo_sapiens
ENSPNYG00000003528	sf3b3	96	98.463	ENSAPOG00000006172	sf3b3	98	98.463	Acanthochromis_polyacanthus
ENSPNYG00000003528	sf3b3	100	93.033	ENSAMEG00000002187	SF3B3	100	93.033	Ailuropoda_melanoleuca
ENSPNYG00000003528	sf3b3	100	99.264	ENSACIG00000016487	sf3b3	100	99.264	Amphilophus_citrinellus
ENSPNYG00000003528	sf3b3	100	98.603	ENSAOCG00000007158	sf3b3	100	98.603	Amphiprion_ocellaris
ENSPNYG00000003528	sf3b3	100	98.603	ENSAPEG00000022786	sf3b3	100	98.603	Amphiprion_percula
ENSPNYG00000003528	sf3b3	100	98.521	ENSATEG00000013708	sf3b3	100	98.521	Anabas_testudineus
ENSPNYG00000003528	sf3b3	82	94.250	ENSAPLG00000004996	SF3B3	99	92.988	Anas_platyrhynchos
ENSPNYG00000003528	sf3b3	100	93.344	ENSACAG00000001817	SF3B3	100	93.344	Anolis_carolinensis
ENSPNYG00000003528	sf3b3	100	93.180	ENSANAG00000028001	SF3B3	100	93.180	Aotus_nancymaae
ENSPNYG00000003528	sf3b3	100	99.908	ENSACLG00000022555	sf3b3	100	99.908	Astatotilapia_calliptera
ENSPNYG00000003528	sf3b3	100	97.535	ENSAMXG00000003410	sf3b3	100	97.535	Astyanax_mexicanus
ENSPNYG00000003528	sf3b3	100	93.180	ENSBTAG00000010627	SF3B3	100	93.180	Bos_taurus
ENSPNYG00000003528	sf3b3	100	59.984	WBGene00019323	teg-4	100	59.984	Caenorhabditis_elegans
ENSPNYG00000003528	sf3b3	100	93.180	ENSCJAG00000014773	SF3B3	99	93.180	Callithrix_jacchus
ENSPNYG00000003528	sf3b3	100	93.262	ENSCAFG00000020151	SF3B3	100	93.262	Canis_familiaris
ENSPNYG00000003528	sf3b3	100	93.262	ENSCAFG00020020912	SF3B3	100	93.262	Canis_lupus_dingo
ENSPNYG00000003528	sf3b3	100	93.262	ENSCHIG00000019822	SF3B3	100	93.262	Capra_hircus
ENSPNYG00000003528	sf3b3	100	93.180	ENSTSYG00000007910	SF3B3	100	93.180	Carlito_syrichta
ENSPNYG00000003528	sf3b3	84	79.863	ENSCAPG00000001484	SF3B3	92	79.863	Cavia_aperea
ENSPNYG00000003528	sf3b3	100	91.947	ENSCPOG00000000586	SF3B3	100	91.947	Cavia_porcellus
ENSPNYG00000003528	sf3b3	100	93.180	ENSCCAG00000017736	SF3B3	100	93.180	Cebus_capucinus
ENSPNYG00000003528	sf3b3	100	93.180	ENSCATG00000036562	SF3B3	100	93.180	Cercocebus_atys
ENSPNYG00000003528	sf3b3	100	93.180	ENSCLAG00000003921	SF3B3	100	93.180	Chinchilla_lanigera
ENSPNYG00000003528	sf3b3	100	93.180	ENSCSAG00000004371	SF3B3	100	93.180	Chlorocebus_sabaeus
ENSPNYG00000003528	sf3b3	90	89.720	ENSCHOG00000001878	SF3B3	90	89.720	Choloepus_hoffmanni
ENSPNYG00000003528	sf3b3	100	92.851	ENSCPBG00000015853	SF3B3	100	92.851	Chrysemys_picta_bellii
ENSPNYG00000003528	sf3b3	100	79.967	ENSCING00000001342	-	100	79.967	Ciona_intestinalis
ENSPNYG00000003528	sf3b3	99	78.736	ENSCSAVG00000011454	-	100	78.736	Ciona_savignyi
ENSPNYG00000003528	sf3b3	100	89.565	ENSCANG00000042920	SF3B3	100	90.058	Colobus_angolensis_palliatus
ENSPNYG00000003528	sf3b3	100	93.098	ENSCGRG00001015908	Sf3b3	100	93.098	Cricetulus_griseus_chok1gshd
ENSPNYG00000003528	sf3b3	100	93.098	ENSCGRG00000010180	Sf3b3	100	93.098	Cricetulus_griseus_crigri
ENSPNYG00000003528	sf3b3	83	96.464	ENSCSEG00000014192	sf3b3	99	96.607	Cynoglossus_semilaevis
ENSPNYG00000003528	sf3b3	100	97.699	ENSCVAG00000010459	sf3b3	100	97.699	Cyprinodon_variegatus
ENSPNYG00000003528	sf3b3	100	97.124	ENSDARG00000103553	sf3b3	100	97.124	Danio_rerio
ENSPNYG00000003528	sf3b3	92	89.875	ENSDNOG00000043626	SF3B3	100	92.864	Dasypus_novemcinctus
ENSPNYG00000003528	sf3b3	100	93.180	ENSDORG00000014176	Sf3b3	100	93.180	Dipodomys_ordii
ENSPNYG00000003528	sf3b3	100	75.203	FBgn0035162	Sf3b3	100	75.203	Drosophila_melanogaster
ENSPNYG00000003528	sf3b3	84	95.781	ENSETEG00000002729	SF3B3	84	95.781	Echinops_telfairi
ENSPNYG00000003528	sf3b3	100	86.606	ENSEBUG00000006117	sf3b3	100	86.606	Eptatretus_burgeri
ENSPNYG00000003528	sf3b3	100	93.262	ENSEASG00005013376	SF3B3	100	93.262	Equus_asinus_asinus
ENSPNYG00000003528	sf3b3	100	93.262	ENSECAG00000014053	SF3B3	100	93.262	Equus_caballus
ENSPNYG00000003528	sf3b3	93	92.632	ENSEEUG00000015611	SF3B3	93	92.632	Erinaceus_europaeus
ENSPNYG00000003528	sf3b3	100	95.902	ENSELUG00000015417	sf3b3	100	95.902	Esox_lucius
ENSPNYG00000003528	sf3b3	100	93.262	ENSFCAG00000009487	SF3B3	100	93.262	Felis_catus
ENSPNYG00000003528	sf3b3	100	92.933	ENSFALG00000007372	SF3B3	100	92.933	Ficedula_albicollis
ENSPNYG00000003528	sf3b3	100	93.180	ENSFDAG00000002608	SF3B3	100	93.180	Fukomys_damarensis
ENSPNYG00000003528	sf3b3	100	98.274	ENSFHEG00000017824	sf3b3	100	98.274	Fundulus_heteroclitus
ENSPNYG00000003528	sf3b3	100	93.678	ENSGMOG00000008139	sf3b3	100	93.678	Gadus_morhua
ENSPNYG00000003528	sf3b3	100	93.180	ENSGALG00000002531	SF3B3	100	93.180	Gallus_gallus
ENSPNYG00000003528	sf3b3	100	97.864	ENSGAFG00000015206	sf3b3	100	97.864	Gambusia_affinis
ENSPNYG00000003528	sf3b3	100	97.701	ENSGACG00000002646	sf3b3	100	97.701	Gasterosteus_aculeatus
ENSPNYG00000003528	sf3b3	96	92.997	ENSGAGG00000006746	SF3B3	97	92.997	Gopherus_agassizii
ENSPNYG00000003528	sf3b3	100	93.180	ENSGGOG00000003246	SF3B3	100	93.180	Gorilla_gorilla
ENSPNYG00000003528	sf3b3	100	95.860	ENSHBUG00000005960	sf3b3	100	95.860	Haplochromis_burtoni
ENSPNYG00000003528	sf3b3	100	93.180	ENSHGLG00000010135	SF3B3	100	93.180	Heterocephalus_glaber_female
ENSPNYG00000003528	sf3b3	100	91.079	ENSHGLG00100011148	SF3B3	100	91.079	Heterocephalus_glaber_male
ENSPNYG00000003528	sf3b3	100	97.617	ENSHCOG00000011981	sf3b3	100	97.617	Hippocampus_comes
ENSPNYG00000003528	sf3b3	100	97.453	ENSIPUG00000020435	sf3b3	100	97.453	Ictalurus_punctatus
ENSPNYG00000003528	sf3b3	100	93.180	ENSSTOG00000007065	SF3B3	100	93.180	Ictidomys_tridecemlineatus
ENSPNYG00000003528	sf3b3	100	93.180	ENSJJAG00000003948	Sf3b3	100	93.180	Jaculus_jaculus
ENSPNYG00000003528	sf3b3	100	95.809	ENSKMAG00000004066	sf3b3	99	97.950	Kryptolebias_marmoratus
ENSPNYG00000003528	sf3b3	100	97.864	ENSLBEG00000018302	sf3b3	100	97.864	Labrus_bergylta
ENSPNYG00000003528	sf3b3	98	89.867	ENSLACG00000012501	SF3B3	99	89.867	Latimeria_chalumnae
ENSPNYG00000003528	sf3b3	100	96.634	ENSLOCG00000007566	sf3b3	100	96.634	Lepisosteus_oculatus
ENSPNYG00000003528	sf3b3	100	93.262	ENSLAFG00000012219	SF3B3	100	93.262	Loxodonta_africana
ENSPNYG00000003528	sf3b3	100	93.180	ENSMFAG00000045487	SF3B3	100	93.180	Macaca_fascicularis
ENSPNYG00000003528	sf3b3	100	93.180	ENSMMUG00000017812	SF3B3	100	93.180	Macaca_mulatta
ENSPNYG00000003528	sf3b3	100	93.180	ENSMNEG00000033385	SF3B3	100	93.180	Macaca_nemestrina
ENSPNYG00000003528	sf3b3	100	89.647	ENSMLEG00000043891	SF3B3	100	89.647	Mandrillus_leucophaeus
ENSPNYG00000003528	sf3b3	100	98.603	ENSMAMG00000016837	sf3b3	100	98.603	Mastacembelus_armatus
ENSPNYG00000003528	sf3b3	96	99.905	ENSMZEG00005026015	sf3b3	99	99.905	Maylandia_zebra
ENSPNYG00000003528	sf3b3	100	99.918	ENSMZEG00005010836	sf3b3	100	99.918	Maylandia_zebra
ENSPNYG00000003528	sf3b3	100	93.180	ENSMGAG00000001597	SF3B3	100	93.180	Meleagris_gallopavo
ENSPNYG00000003528	sf3b3	81	77.273	ENSMAUG00000013618	Sf3b3	95	76.779	Mesocricetus_auratus
ENSPNYG00000003528	sf3b3	100	92.207	ENSMICG00000001363	SF3B3	100	92.207	Microcebus_murinus
ENSPNYG00000003528	sf3b3	100	93.098	ENSMOCG00000006108	Sf3b3	100	93.098	Microtus_ochrogaster
ENSPNYG00000003528	sf3b3	96	98.187	ENSMMOG00000002598	sf3b3	97	98.187	Mola_mola
ENSPNYG00000003528	sf3b3	100	89.163	ENSMODG00000014363	SF3B3	100	89.163	Monodelphis_domestica
ENSPNYG00000003528	sf3b3	100	97.946	ENSMALG00000008014	sf3b3	100	97.946	Monopterus_albus
ENSPNYG00000003528	sf3b3	100	93.180	MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.180	Mus_caroli
ENSPNYG00000003528	sf3b3	100	93.098	ENSMUSG00000033732	Sf3b3	100	93.098	Mus_musculus
ENSPNYG00000003528	sf3b3	100	93.016	MGP_SPRETEiJ_G0032681	Sf3b3	100	93.016	Mus_spretus
ENSPNYG00000003528	sf3b3	100	93.262	ENSMPUG00000010277	SF3B3	100	93.262	Mustela_putorius_furo
ENSPNYG00000003528	sf3b3	100	93.098	ENSMLUG00000014607	SF3B3	100	93.098	Myotis_lucifugus
ENSPNYG00000003528	sf3b3	100	93.180	ENSNGAG00000021903	Sf3b3	100	93.180	Nannospalax_galili
ENSPNYG00000003528	sf3b3	90	97.222	ENSNBRG00000007197	sf3b3	99	97.222	Neolamprologus_brichardi
ENSPNYG00000003528	sf3b3	100	91.708	ENSNLEG00000016127	SF3B3	100	91.708	Nomascus_leucogenys
ENSPNYG00000003528	sf3b3	92	88.874	ENSMEUG00000004479	SF3B3	94	88.874	Notamacropus_eugenii
ENSPNYG00000003528	sf3b3	98	90.025	ENSOPRG00000009847	SF3B3	100	90.025	Ochotona_princeps
ENSPNYG00000003528	sf3b3	100	93.180	ENSODEG00000014154	SF3B3	100	93.180	Octodon_degus
ENSPNYG00000003528	sf3b3	100	99.671	ENSONIG00000011198	sf3b3	100	99.671	Oreochromis_niloticus
ENSPNYG00000003528	sf3b3	100	93.344	ENSOANG00000001161	-	100	93.344	Ornithorhynchus_anatinus
ENSPNYG00000003528	sf3b3	100	91.208	ENSOCUG00000004139	SF3B3	100	91.208	Oryctolagus_cuniculus
ENSPNYG00000003528	sf3b3	100	97.535	ENSORLG00000013472	sf3b3	100	97.535	Oryzias_latipes
ENSPNYG00000003528	sf3b3	100	97.535	ENSORLG00020017473	sf3b3	100	97.535	Oryzias_latipes_hni
ENSPNYG00000003528	sf3b3	100	97.535	ENSORLG00015007710	sf3b3	100	97.535	Oryzias_latipes_hsok
ENSPNYG00000003528	sf3b3	100	97.699	ENSOMEG00000014483	sf3b3	100	97.699	Oryzias_melastigma
ENSPNYG00000003528	sf3b3	100	92.869	ENSOGAG00000016051	SF3B3	100	92.869	Otolemur_garnettii
ENSPNYG00000003528	sf3b3	100	93.033	ENSOARG00000004816	SF3B3	100	93.033	Ovis_aries
ENSPNYG00000003528	sf3b3	100	93.180	ENSPPAG00000026807	SF3B3	100	93.180	Pan_paniscus
ENSPNYG00000003528	sf3b3	100	93.262	ENSPPRG00000001686	SF3B3	100	93.262	Panthera_pardus
ENSPNYG00000003528	sf3b3	97	93.169	ENSPTIG00000020382	SF3B3	100	93.169	Panthera_tigris_altaica
ENSPNYG00000003528	sf3b3	100	93.180	ENSPTRG00000008308	SF3B3	100	93.180	Pan_troglodytes
ENSPNYG00000003528	sf3b3	100	93.180	ENSPANG00000024075	SF3B3	100	93.180	Papio_anubis
ENSPNYG00000003528	sf3b3	100	96.713	ENSPKIG00000002712	sf3b3	100	96.713	Paramormyrops_kingsleyae
ENSPNYG00000003528	sf3b3	97	90.156	ENSPSIG00000002232	SF3B3	100	93.008	Pelodiscus_sinensis
ENSPNYG00000003528	sf3b3	100	93.098	ENSPEMG00000008603	Sf3b3	100	93.098	Peromyscus_maniculatus_bairdii
ENSPNYG00000003528	sf3b3	100	90.468	ENSPMAG00000001793	sf3b3	100	90.468	Petromyzon_marinus
ENSPNYG00000003528	sf3b3	100	93.344	ENSPCIG00000014927	SF3B3	100	93.344	Phascolarctos_cinereus
ENSPNYG00000003528	sf3b3	100	98.110	ENSPFOG00000015516	sf3b3	100	98.110	Poecilia_formosa
ENSPNYG00000003528	sf3b3	100	98.110	ENSPLAG00000014330	sf3b3	100	98.110	Poecilia_latipinna
ENSPNYG00000003528	sf3b3	100	98.192	ENSPMEG00000019856	sf3b3	100	98.192	Poecilia_mexicana
ENSPNYG00000003528	sf3b3	82	98.420	ENSPREG00000019669	sf3b3	97	98.374	Poecilia_reticulata
ENSPNYG00000003528	sf3b3	95	97.297	ENSPPYG00000007539	SF3B3	100	93.284	Pongo_abelii
ENSPNYG00000003528	sf3b3	100	72.638	ENSPCAG00000002623	SF3B3	100	72.638	Procavia_capensis
ENSPNYG00000003528	sf3b3	84	96.262	ENSPCOG00000026582	SF3B3	100	96.262	Propithecus_coquereli
ENSPNYG00000003528	sf3b3	100	93.180	ENSPVAG00000000684	SF3B3	100	93.180	Pteropus_vampyrus
ENSPNYG00000003528	sf3b3	100	97.124	ENSPNAG00000015419	sf3b3	100	97.124	Pygocentrus_nattereri
ENSPNYG00000003528	sf3b3	100	93.098	ENSRNOG00000017724	Sf3b3	100	93.098	Rattus_norvegicus
ENSPNYG00000003528	sf3b3	100	93.180	ENSRBIG00000021904	SF3B3	100	93.180	Rhinopithecus_bieti
ENSPNYG00000003528	sf3b3	100	93.180	ENSRROG00000045703	SF3B3	100	93.180	Rhinopithecus_roxellana
ENSPNYG00000003528	sf3b3	81	41.935	YML049C	-	75	41.935	Saccharomyces_cerevisiae
ENSPNYG00000003528	sf3b3	100	93.180	ENSSBOG00000029156	SF3B3	100	93.180	Saimiri_boliviensis_boliviensis
ENSPNYG00000003528	sf3b3	100	93.344	ENSSHAG00000000372	SF3B3	100	93.344	Sarcophilus_harrisii
ENSPNYG00000003528	sf3b3	100	97.042	ENSSFOG00015012877	sf3b3	100	97.042	Scleropages_formosus
ENSPNYG00000003528	sf3b3	100	97.288	ENSSMAG00000014386	sf3b3	100	97.288	Scophthalmus_maximus
ENSPNYG00000003528	sf3b3	100	98.767	ENSSDUG00000021201	sf3b3	100	98.767	Seriola_dumerili
ENSPNYG00000003528	sf3b3	100	98.767	ENSSLDG00000017532	sf3b3	100	98.767	Seriola_lalandi_dorsalis
ENSPNYG00000003528	sf3b3	93	93.015	ENSSARG00000006917	SF3B3	93	93.015	Sorex_araneus
ENSPNYG00000003528	sf3b3	100	93.016	ENSSPUG00000006253	SF3B3	100	93.016	Sphenodon_punctatus
ENSPNYG00000003528	sf3b3	100	90.715	ENSSPAG00000003125	sf3b3	100	90.715	Stegastes_partitus
ENSPNYG00000003528	sf3b3	100	93.376	ENSSSCG00000025323	SF3B3	100	93.376	Sus_scrofa
ENSPNYG00000003528	sf3b3	100	93.103	ENSTGUG00000006082	SF3B3	100	93.103	Taeniopygia_guttata
ENSPNYG00000003528	sf3b3	55	85.904	ENSTRUG00000015623	sf3b3	96	80.880	Takifugu_rubripes
ENSPNYG00000003528	sf3b3	89	97.886	ENSTNIG00000004857	sf3b3	100	97.886	Tetraodon_nigroviridis
ENSPNYG00000003528	sf3b3	93	79.137	ENSTBEG00000002946	SF3B3	100	79.137	Tupaia_belangeri
ENSPNYG00000003528	sf3b3	100	92.440	ENSTTRG00000005855	SF3B3	100	92.440	Tursiops_truncatus
ENSPNYG00000003528	sf3b3	100	93.262	ENSUAMG00000006780	SF3B3	100	93.262	Ursus_americanus
ENSPNYG00000003528	sf3b3	100	93.262	ENSUMAG00000017757	SF3B3	100	93.262	Ursus_maritimus
ENSPNYG00000003528	sf3b3	100	78.143	ENSVPAG00000003202	SF3B3	100	78.143	Vicugna_pacos
ENSPNYG00000003528	sf3b3	100	93.262	ENSVVUG00000017922	SF3B3	100	93.262	Vulpes_vulpes
ENSPNYG00000003528	sf3b3	100	93.509	ENSXETG00000032869	SF3B3	100	93.509	Xenopus_tropicalis
ENSPNYG00000003528	sf3b3	78	98.578	ENSXCOG00000013628	sf3b3	97	98.620	Xiphophorus_couchianus
ENSPNYG00000003528	sf3b3	100	98.110	ENSXMAG00000006334	sf3b3	100	98.110	Xiphophorus_maculatus