EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000003554 (Gene tree)
Gene ID: 102194185
Gene Symbol: prpf18
Alias: zgc:91830
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 6417 bases
Position: chrJH419375.1:923730-930146
Accession: 102194185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000004606	PRP4	PF08799.11	1e-13	1	1
ENSPNYP00000004596	PRP4	PF08799.11	1.1e-13	1	1
ENSPNYP00000004606	Prp18	PF02840.15	8.2e-63	1	1
ENSPNYP00000004596	Prp18	PF02840.15	8.2e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000004723	-	1600	XM_005745969	ENSPNYP00000004606	341 (aa)	XP_005746026	UPI0003AF5823
ENSPNYT00000004712	-	1627	XM_005745968	ENSPNYP00000004596	350 (aa)	XP_005746025	UPI0003AFB29B

Gene Model

Click here to download ENSPNYG00000003554's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000003554's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000003554	prpf18	100	85.088	ENSG00000165630	PRPF18	100	85.088	Homo_sapiens
ENSPNYG00000003554	prpf18	100	94.571	ENSAPOG00000024177	prpf18	100	94.571	Acanthochromis_polyacanthus
ENSPNYG00000003554	prpf18	100	84.503	ENSAMEG00000013591	-	100	84.503	Ailuropoda_melanoleuca
ENSPNYG00000003554	prpf18	100	96.188	ENSACIG00000001186	prpf18	100	96.188	Amphilophus_citrinellus
ENSPNYG00000003554	prpf18	98	94.611	ENSAOCG00000006572	prpf18	94	94.444	Amphiprion_ocellaris
ENSPNYG00000003554	prpf18	100	94.721	ENSAPEG00000004564	prpf18	100	94.721	Amphiprion_percula
ENSPNYG00000003554	prpf18	100	94.428	ENSATEG00000000303	prpf18	100	94.428	Anabas_testudineus
ENSPNYG00000003554	prpf18	99	82.647	ENSAPLG00000003387	-	99	82.647	Anas_platyrhynchos
ENSPNYG00000003554	prpf18	100	83.430	ENSACAG00000000818	-	100	83.430	Anolis_carolinensis
ENSPNYG00000003554	prpf18	100	84.795	ENSANAG00000037445	-	100	84.795	Aotus_nancymaae
ENSPNYG00000003554	prpf18	100	99.707	ENSACLG00000026296	prpf18	100	99.707	Astatotilapia_calliptera
ENSPNYG00000003554	prpf18	100	88.857	ENSAMXG00000012848	prpf18	100	88.857	Astyanax_mexicanus
ENSPNYG00000003554	prpf18	100	84.211	ENSBTAG00000017244	PRPF18	100	84.211	Bos_taurus
ENSPNYG00000003554	prpf18	98	40.517	WBGene00009320	F32B6.3	97	39.769	Caenorhabditis_elegans
ENSPNYG00000003554	prpf18	100	84.795	ENSCJAG00000009432	-	100	84.795	Callithrix_jacchus
ENSPNYG00000003554	prpf18	100	84.503	ENSCAFG00000004735	-	100	84.503	Canis_familiaris
ENSPNYG00000003554	prpf18	100	84.503	ENSCAFG00020007712	-	100	84.503	Canis_lupus_dingo
ENSPNYG00000003554	prpf18	100	84.211	ENSCHIG00000000499	-	100	84.211	Capra_hircus
ENSPNYG00000003554	prpf18	100	84.795	ENSTSYG00000003517	-	100	84.795	Carlito_syrichta
ENSPNYG00000003554	prpf18	100	85.088	ENSCPOG00000021069	-	100	85.088	Cavia_porcellus
ENSPNYG00000003554	prpf18	100	84.795	ENSCCAG00000036822	-	100	84.795	Cebus_capucinus
ENSPNYG00000003554	prpf18	100	74.561	ENSCATG00000016633	-	100	74.561	Cercocebus_atys
ENSPNYG00000003554	prpf18	100	84.503	ENSCLAG00000011770	-	100	84.503	Chinchilla_lanigera
ENSPNYG00000003554	prpf18	100	83.476	ENSCSAG00000013109	-	100	83.476	Chlorocebus_sabaeus
ENSPNYG00000003554	prpf18	100	80.337	ENSCPBG00000003100	-	100	81.180	Chrysemys_picta_bellii
ENSPNYG00000003554	prpf18	99	56.176	ENSCING00000020481	-	97	55.908	Ciona_intestinalis
ENSPNYG00000003554	prpf18	99	56.395	ENSCSAVG00000010546	-	99	55.685	Ciona_savignyi
ENSPNYG00000003554	prpf18	100	85.088	ENSCANG00000034900	-	100	85.088	Colobus_angolensis_palliatus
ENSPNYG00000003554	prpf18	100	84.503	ENSCGRG00001023665	Prpf18	100	84.503	Cricetulus_griseus_chok1gshd
ENSPNYG00000003554	prpf18	100	84.503	ENSCGRG00000014690	Prpf18	100	84.503	Cricetulus_griseus_crigri
ENSPNYG00000003554	prpf18	100	90.029	ENSCSEG00000005536	prpf18	99	90.029	Cynoglossus_semilaevis
ENSPNYG00000003554	prpf18	100	92.082	ENSCVAG00000012401	prpf18	100	92.082	Cyprinodon_variegatus
ENSPNYG00000003554	prpf18	100	90.351	ENSDARG00000058306	prpf18	100	90.351	Danio_rerio
ENSPNYG00000003554	prpf18	100	84.503	ENSDNOG00000035607	-	100	84.503	Dasypus_novemcinctus
ENSPNYG00000003554	prpf18	100	84.211	ENSDORG00000000858	Prpf18	100	84.211	Dipodomys_ordii
ENSPNYG00000003554	prpf18	99	51.479	FBgn0027784	Prp18	98	50.888	Drosophila_melanogaster
ENSPNYG00000003554	prpf18	100	76.608	ENSETEG00000015060	-	100	76.608	Echinops_telfairi
ENSPNYG00000003554	prpf18	100	70.317	ENSEBUG00000016502	prpf18	99	69.452	Eptatretus_burgeri
ENSPNYG00000003554	prpf18	100	84.795	ENSEASG00005019373	-	100	84.795	Equus_asinus_asinus
ENSPNYG00000003554	prpf18	100	84.795	ENSECAG00000006997	PRPF18	100	84.795	Equus_caballus
ENSPNYG00000003554	prpf18	92	51.266	ENSEEUG00000001171	-	100	51.266	Erinaceus_europaeus
ENSPNYG00000003554	prpf18	100	88.338	ENSELUG00000022190	prpf18	100	88.338	Esox_lucius
ENSPNYG00000003554	prpf18	100	84.211	ENSFCAG00000004436	-	100	84.211	Felis_catus
ENSPNYG00000003554	prpf18	93	79.692	ENSFALG00000001912	-	97	80.000	Ficedula_albicollis
ENSPNYG00000003554	prpf18	94	86.562	ENSFDAG00000014026	-	100	86.562	Fukomys_damarensis
ENSPNYG00000003554	prpf18	99	57.101	ENSFDAG00000010713	-	97	57.101	Fukomys_damarensis
ENSPNYG00000003554	prpf18	80	94.872	ENSFHEG00000020125	prpf18	98	94.757	Fundulus_heteroclitus
ENSPNYG00000003554	prpf18	99	86.765	ENSGMOG00000012210	prpf18	99	86.765	Gadus_morhua
ENSPNYG00000003554	prpf18	100	83.626	ENSGALG00000043593	-	100	83.626	Gallus_gallus
ENSPNYG00000003554	prpf18	100	91.789	ENSGAFG00000006034	prpf18	100	91.789	Gambusia_affinis
ENSPNYG00000003554	prpf18	100	89.736	ENSGACG00000012232	prpf18	100	89.736	Gasterosteus_aculeatus
ENSPNYG00000003554	prpf18	100	84.211	ENSGAGG00000016878	-	100	84.211	Gopherus_agassizii
ENSPNYG00000003554	prpf18	92	83.861	ENSGGOG00000025188	-	96	83.861	Gorilla_gorilla
ENSPNYG00000003554	prpf18	100	99.714	ENSHBUG00000010264	prpf18	100	99.714	Haplochromis_burtoni
ENSPNYG00000003554	prpf18	100	84.503	ENSHGLG00000018534	PRPF18	100	84.503	Heterocephalus_glaber_female
ENSPNYG00000003554	prpf18	94	86.250	ENSHGLG00100012161	-	98	86.250	Heterocephalus_glaber_male
ENSPNYG00000003554	prpf18	100	94.428	ENSHCOG00000015987	prpf18	100	94.428	Hippocampus_comes
ENSPNYG00000003554	prpf18	100	83.003	ENSIPUG00000007432	prpf18	100	83.853	Ictalurus_punctatus
ENSPNYG00000003554	prpf18	100	84.503	ENSSTOG00000008735	-	100	84.503	Ictidomys_tridecemlineatus
ENSPNYG00000003554	prpf18	100	85.088	ENSJJAG00000024041	-	100	85.088	Jaculus_jaculus
ENSPNYG00000003554	prpf18	100	62.974	ENSJJAG00000015191	-	100	62.974	Jaculus_jaculus
ENSPNYG00000003554	prpf18	100	92.669	ENSKMAG00000012124	prpf18	100	92.669	Kryptolebias_marmoratus
ENSPNYG00000003554	prpf18	96	91.437	ENSLBEG00000028466	prpf18	97	91.437	Labrus_bergylta
ENSPNYG00000003554	prpf18	100	83.918	ENSLACG00000009885	prpf18	100	84.795	Latimeria_chalumnae
ENSPNYG00000003554	prpf18	100	88.304	ENSLOCG00000016736	prpf18	100	88.304	Lepisosteus_oculatus
ENSPNYG00000003554	prpf18	100	85.088	ENSLAFG00000007753	-	100	85.088	Loxodonta_africana
ENSPNYG00000003554	prpf18	100	85.088	ENSMFAG00000000540	-	100	85.088	Macaca_fascicularis
ENSPNYG00000003554	prpf18	100	85.088	ENSMMUG00000015071	PRPF18	93	92.715	Macaca_mulatta
ENSPNYG00000003554	prpf18	100	85.088	ENSMNEG00000024679	-	100	85.088	Macaca_nemestrina
ENSPNYG00000003554	prpf18	100	69.883	ENSMLEG00000031715	-	100	69.883	Mandrillus_leucophaeus
ENSPNYG00000003554	prpf18	100	94.000	ENSMAMG00000006610	prpf18	100	94.000	Mastacembelus_armatus
ENSPNYG00000003554	prpf18	100	99.714	ENSMZEG00005019392	prpf18	100	99.714	Maylandia_zebra
ENSPNYG00000003554	prpf18	100	83.626	ENSMGAG00000005023	-	100	83.626	Meleagris_gallopavo
ENSPNYG00000003554	prpf18	100	84.795	ENSMICG00000006572	-	100	84.795	Microcebus_murinus
ENSPNYG00000003554	prpf18	100	85.088	ENSMOCG00000021468	Prpf18	100	85.088	Microtus_ochrogaster
ENSPNYG00000003554	prpf18	100	92.082	ENSMMOG00000013012	prpf18	100	92.082	Mola_mola
ENSPNYG00000003554	prpf18	96	78.994	ENSMODG00000016902	-	92	78.994	Monodelphis_domestica
ENSPNYG00000003554	prpf18	100	76.023	ENSMODG00000024043	-	100	76.023	Monodelphis_domestica
ENSPNYG00000003554	prpf18	100	82.899	ENSMALG00000005486	prpf18	100	86.047	Monopterus_albus
ENSPNYG00000003554	prpf18	100	84.503	MGP_CAROLIEiJ_G0023143	Prpf18	100	93.151	Mus_caroli
ENSPNYG00000003554	prpf18	100	84.503	ENSMUSG00000039449	Prpf18	100	93.151	Mus_musculus
ENSPNYG00000003554	prpf18	100	84.795	MGP_PahariEiJ_G0019203	Prpf18	100	93.151	Mus_pahari
ENSPNYG00000003554	prpf18	100	84.795	MGP_SPRETEiJ_G0024061	Prpf18	100	93.151	Mus_spretus
ENSPNYG00000003554	prpf18	100	84.211	ENSMPUG00000000938	-	100	84.211	Mustela_putorius_furo
ENSPNYG00000003554	prpf18	100	84.211	ENSMLUG00000009200	-	100	84.211	Myotis_lucifugus
ENSPNYG00000003554	prpf18	100	85.088	ENSNGAG00000012500	-	100	85.088	Nannospalax_galili
ENSPNYG00000003554	prpf18	68	81.897	ENSNGAG00000023550	-	82	82.609	Nannospalax_galili
ENSPNYG00000003554	prpf18	100	99.413	ENSNBRG00000001778	prpf18	100	99.413	Neolamprologus_brichardi
ENSPNYG00000003554	prpf18	100	85.088	ENSNLEG00000012186	-	100	85.088	Nomascus_leucogenys
ENSPNYG00000003554	prpf18	76	72.201	ENSMEUG00000005032	-	75	70.656	Notamacropus_eugenii
ENSPNYG00000003554	prpf18	77	65.660	ENSOPRG00000002153	-	100	65.660	Ochotona_princeps
ENSPNYG00000003554	prpf18	100	84.211	ENSODEG00000003770	-	100	84.211	Octodon_degus
ENSPNYG00000003554	prpf18	98	98.204	ENSONIG00000014854	prpf18	96	98.204	Oreochromis_niloticus
ENSPNYG00000003554	prpf18	100	83.918	ENSOANG00000015404	-	100	83.918	Ornithorhynchus_anatinus
ENSPNYG00000003554	prpf18	100	84.795	ENSOCUG00000027756	-	96	85.321	Oryctolagus_cuniculus
ENSPNYG00000003554	prpf18	100	92.571	ENSORLG00000010293	prpf18	100	92.571	Oryzias_latipes
ENSPNYG00000003554	prpf18	100	92.669	ENSORLG00020001530	prpf18	100	92.669	Oryzias_latipes_hni
ENSPNYG00000003554	prpf18	100	92.375	ENSORLG00015013705	prpf18	100	92.375	Oryzias_latipes_hsok
ENSPNYG00000003554	prpf18	100	93.842	ENSOMEG00000009167	prpf18	100	93.842	Oryzias_melastigma
ENSPNYG00000003554	prpf18	100	83.918	ENSOGAG00000007294	-	100	83.918	Otolemur_garnettii
ENSPNYG00000003554	prpf18	100	82.621	ENSOARG00000006243	-	100	82.621	Ovis_aries
ENSPNYG00000003554	prpf18	100	85.088	ENSPPAG00000041959	-	100	85.088	Pan_paniscus
ENSPNYG00000003554	prpf18	100	84.211	ENSPPRG00000000107	-	100	84.211	Panthera_pardus
ENSPNYG00000003554	prpf18	100	84.211	ENSPTIG00000021094	-	100	84.211	Panthera_tigris_altaica
ENSPNYG00000003554	prpf18	100	85.088	ENSPTRG00000002306	PRPF18	100	85.088	Pan_troglodytes
ENSPNYG00000003554	prpf18	100	84.795	ENSPANG00000023346	-	100	84.795	Papio_anubis
ENSPNYG00000003554	prpf18	100	86.895	ENSPKIG00000014128	prpf18	96	86.895	Paramormyrops_kingsleyae
ENSPNYG00000003554	prpf18	100	83.626	ENSPSIG00000016064	-	100	83.626	Pelodiscus_sinensis
ENSPNYG00000003554	prpf18	100	84.795	ENSPMGG00000016486	prpf18	100	84.795	Periophthalmus_magnuspinnatus
ENSPNYG00000003554	prpf18	100	84.795	ENSPEMG00000013704	Prpf18	100	84.795	Peromyscus_maniculatus_bairdii
ENSPNYG00000003554	prpf18	100	74.286	ENSPMAG00000000204	prpf18	100	74.286	Petromyzon_marinus
ENSPNYG00000003554	prpf18	92	82.911	ENSPCIG00000012963	-	99	82.911	Phascolarctos_cinereus
ENSPNYG00000003554	prpf18	100	91.143	ENSPFOG00000017611	prpf18	100	91.143	Poecilia_formosa
ENSPNYG00000003554	prpf18	100	91.496	ENSPLAG00000000369	prpf18	100	91.496	Poecilia_latipinna
ENSPNYG00000003554	prpf18	100	91.789	ENSPMEG00000005183	prpf18	100	91.789	Poecilia_mexicana
ENSPNYG00000003554	prpf18	100	91.202	ENSPREG00000015232	prpf18	100	91.202	Poecilia_reticulata
ENSPNYG00000003554	prpf18	100	84.795	ENSPPYG00000002101	PRPF18	100	84.795	Pongo_abelii
ENSPNYG00000003554	prpf18	100	67.251	ENSPCAG00000010833	-	100	67.251	Procavia_capensis
ENSPNYG00000003554	prpf18	100	80.409	ENSPCOG00000013057	-	100	80.409	Propithecus_coquereli
ENSPNYG00000003554	prpf18	100	51.754	ENSPVAG00000002947	-	100	51.754	Pteropus_vampyrus
ENSPNYG00000003554	prpf18	100	89.174	ENSPNAG00000023151	prpf18	100	89.174	Pygocentrus_nattereri
ENSPNYG00000003554	prpf18	100	84.503	ENSRNOG00000018396	Prpf18	100	84.503	Rattus_norvegicus
ENSPNYG00000003554	prpf18	100	84.795	ENSRBIG00000028028	-	100	84.795	Rhinopithecus_bieti
ENSPNYG00000003554	prpf18	100	85.088	ENSRROG00000040695	-	100	85.088	Rhinopithecus_roxellana
ENSPNYG00000003554	prpf18	100	84.795	ENSSBOG00000034482	-	100	84.795	Saimiri_boliviensis_boliviensis
ENSPNYG00000003554	prpf18	100	83.918	ENSSHAG00000016463	-	100	83.918	Sarcophilus_harrisii
ENSPNYG00000003554	prpf18	100	70.175	ENSSHAG00000009669	-	100	70.175	Sarcophilus_harrisii
ENSPNYG00000003554	prpf18	77	45.455	ENSSFOG00015021154	-	89	47.639	Scleropages_formosus
ENSPNYG00000003554	prpf18	98	86.377	ENSSFOG00015022118	prpf18	100	81.268	Scleropages_formosus
ENSPNYG00000003554	prpf18	100	91.143	ENSSMAG00000005308	prpf18	100	91.143	Scophthalmus_maximus
ENSPNYG00000003554	prpf18	100	95.714	ENSSDUG00000015428	prpf18	100	95.714	Seriola_dumerili
ENSPNYG00000003554	prpf18	100	95.429	ENSSLDG00000023989	prpf18	100	95.429	Seriola_lalandi_dorsalis
ENSPNYG00000003554	prpf18	100	56.725	ENSSARG00000005307	-	100	56.725	Sorex_araneus
ENSPNYG00000003554	prpf18	100	83.918	ENSSPUG00000002619	-	100	83.918	Sphenodon_punctatus
ENSPNYG00000003554	prpf18	100	94.286	ENSSPAG00000019502	prpf18	100	94.286	Stegastes_partitus
ENSPNYG00000003554	prpf18	100	84.503	ENSSSCG00000026354	-	100	84.503	Sus_scrofa
ENSPNYG00000003554	prpf18	100	83.041	ENSTGUG00000002286	-	100	83.041	Taeniopygia_guttata
ENSPNYG00000003554	prpf18	100	88.563	ENSTRUG00000011278	prpf18	100	88.563	Takifugu_rubripes
ENSPNYG00000003554	prpf18	100	89.443	ENSTNIG00000000911	prpf18	100	89.443	Tetraodon_nigroviridis
ENSPNYG00000003554	prpf18	80	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSPNYG00000003554	prpf18	100	85.380	ENSTTRG00000011117	PRPF18	100	85.380	Tursiops_truncatus
ENSPNYG00000003554	prpf18	91	87.138	ENSUAMG00000001815	-	93	87.138	Ursus_americanus
ENSPNYG00000003554	prpf18	100	79.825	ENSUMAG00000012329	-	100	79.825	Ursus_maritimus
ENSPNYG00000003554	prpf18	100	78.947	ENSVPAG00000011486	-	100	78.947	Vicugna_pacos
ENSPNYG00000003554	prpf18	100	84.503	ENSVVUG00000005453	-	100	84.503	Vulpes_vulpes
ENSPNYG00000003554	prpf18	100	75.942	ENSXETG00000024057	prpf18	100	75.652	Xenopus_tropicalis
ENSPNYG00000003554	prpf18	100	90.962	ENSXCOG00000020414	prpf18	100	90.962	Xiphophorus_couchianus
ENSPNYG00000003554	prpf18	100	91.496	ENSXMAG00000004713	prpf18	91	91.496	Xiphophorus_maculatus