EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000003620 (Gene tree)
Gene ID: 102212808
Gene Symbol: polr1c
Alias: zgc:65973
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 7416 bases
Position: chrJH419826.1:36975-44390
Accession: 102212808
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000004672	RNA_pol_A_bac	PF01000.26	3.9e-31	1	1
ENSPNYP00000004686	RNA_pol_A_bac	PF01000.26	2.5e-30	1	1
ENSPNYP00000004672	RNA_pol_L	PF01193.24	2e-22	1	1
ENSPNYP00000004686	RNA_pol_L	PF01193.24	7.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000004805	-	1062	-	ENSPNYP00000004686	353 (aa)	-	-
ENSPNYT00000004791	-	2345	XM_005754660	ENSPNYP00000004672	351 (aa)	XP_005754717	UPI0003AF5D0A

Gene Model

Click here to download ENSPNYG00000003620's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000003620's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000003620	polr1c	99	72.206	ENSG00000171453	POLR1C	100	72.656	Homo_sapiens
ENSPNYG00000003620	polr1c	100	89.459	ENSAPOG00000024356	polr1c	100	89.459	Acanthochromis_polyacanthus
ENSPNYG00000003620	polr1c	99	72.779	ENSAMEG00000012205	POLR1C	99	72.365	Ailuropoda_melanoleuca
ENSPNYG00000003620	polr1c	94	81.571	ENSACIG00000016268	polr1c	91	81.571	Amphilophus_citrinellus
ENSPNYG00000003620	polr1c	100	88.889	ENSAOCG00000011687	polr1c	97	88.889	Amphiprion_ocellaris
ENSPNYG00000003620	polr1c	100	89.744	ENSAPEG00000002433	polr1c	100	89.744	Amphiprion_percula
ENSPNYG00000003620	polr1c	99	92.241	ENSATEG00000005985	polr1c	99	92.241	Anabas_testudineus
ENSPNYG00000003620	polr1c	87	72.697	ENSAPLG00000002908	POLR1C	100	72.222	Anas_platyrhynchos
ENSPNYG00000003620	polr1c	88	72.816	ENSACAG00000009764	POLR1C	86	73.203	Anolis_carolinensis
ENSPNYG00000003620	polr1c	99	72.493	ENSANAG00000025805	POLR1C	99	72.080	Aotus_nancymaae
ENSPNYG00000003620	polr1c	57	30.392	ENSACLG00000004854	polr2c	80	30.392	Astatotilapia_calliptera
ENSPNYG00000003620	polr1c	100	99.715	ENSACLG00000006573	polr1c	100	99.715	Astatotilapia_calliptera
ENSPNYG00000003620	polr1c	100	82.621	ENSAMXG00000012062	polr1c	99	82.153	Astyanax_mexicanus
ENSPNYG00000003620	polr1c	99	73.352	ENSBTAG00000018969	POLR1C	99	73.066	Bos_taurus
ENSPNYG00000003620	polr1c	92	46.291	WBGene00019275	rpac-40	92	45.858	Caenorhabditis_elegans
ENSPNYG00000003620	polr1c	99	71.633	ENSCJAG00000005594	POLR1C	99	71.225	Callithrix_jacchus
ENSPNYG00000003620	polr1c	99	72.206	ENSCAFG00000001872	POLR1C	99	71.795	Canis_familiaris
ENSPNYG00000003620	polr1c	99	72.206	ENSCAFG00020012018	POLR1C	99	71.795	Canis_lupus_dingo
ENSPNYG00000003620	polr1c	99	73.352	ENSCHIG00000004352	POLR1C	99	72.779	Capra_hircus
ENSPNYG00000003620	polr1c	99	72.493	ENSTSYG00000011921	POLR1C	99	72.080	Carlito_syrichta
ENSPNYG00000003620	polr1c	86	73.597	ENSCAPG00000015364	POLR1C	88	73.115	Cavia_aperea
ENSPNYG00000003620	polr1c	99	73.352	ENSCPOG00000038098	POLR1C	99	72.934	Cavia_porcellus
ENSPNYG00000003620	polr1c	99	72.206	ENSCCAG00000020169	POLR1C	99	71.795	Cebus_capucinus
ENSPNYG00000003620	polr1c	99	72.206	ENSCATG00000044045	POLR1C	99	71.920	Cercocebus_atys
ENSPNYG00000003620	polr1c	100	73.789	ENSCLAG00000009266	POLR1C	100	73.371	Chinchilla_lanigera
ENSPNYG00000003620	polr1c	99	71.633	ENSCSAG00000011913	POLR1C	99	71.347	Chlorocebus_sabaeus
ENSPNYG00000003620	polr1c	60	68.868	ENSCHOG00000006601	POLR1C	100	68.868	Choloepus_hoffmanni
ENSPNYG00000003620	polr1c	99	75.931	ENSCPBG00000025203	POLR1C	99	75.499	Chrysemys_picta_bellii
ENSPNYG00000003620	polr1c	97	54.094	ENSCING00000003563	-	98	53.623	Ciona_intestinalis
ENSPNYG00000003620	polr1c	99	72.206	ENSCANG00000043167	POLR1C	99	71.795	Colobus_angolensis_palliatus
ENSPNYG00000003620	polr1c	99	71.920	ENSCGRG00001017533	Polr1c	99	71.347	Cricetulus_griseus_chok1gshd
ENSPNYG00000003620	polr1c	86	72.607	ENSCGRG00000013225	Polr1c	100	71.947	Cricetulus_griseus_crigri
ENSPNYG00000003620	polr1c	100	86.610	ENSCSEG00000018097	polr1c	100	85.836	Cynoglossus_semilaevis
ENSPNYG00000003620	polr1c	60	91.509	ENSCVAG00000005684	polr1c	88	90.455	Cyprinodon_variegatus
ENSPNYG00000003620	polr1c	100	81.197	ENSDARG00000039400	polr1c	96	80.453	Danio_rerio
ENSPNYG00000003620	polr1c	100	73.219	ENSDNOG00000042693	POLR1C	100	72.805	Dasypus_novemcinctus
ENSPNYG00000003620	polr1c	99	73.066	ENSDORG00000000429	Polr1c	99	72.650	Dipodomys_ordii
ENSPNYG00000003620	polr1c	90	52.050	FBgn0031657	CG3756	93	51.420	Drosophila_melanogaster
ENSPNYG00000003620	polr1c	98	68.895	ENSETEG00000010807	POLR1C	98	68.605	Echinops_telfairi
ENSPNYG00000003620	polr1c	99	68.012	ENSEBUG00000013725	polr1c	98	67.622	Eptatretus_burgeri
ENSPNYG00000003620	polr1c	99	72.206	ENSEASG00005003338	POLR1C	99	71.795	Equus_asinus_asinus
ENSPNYG00000003620	polr1c	99	72.206	ENSECAG00000023516	POLR1C	98	71.795	Equus_caballus
ENSPNYG00000003620	polr1c	99	73.926	ENSEEUG00000005471	POLR1C	99	73.504	Erinaceus_europaeus
ENSPNYG00000003620	polr1c	100	82.336	ENSELUG00000013027	polr1c	100	81.870	Esox_lucius
ENSPNYG00000003620	polr1c	99	72.779	ENSFCAG00000009735	POLR1C	99	72.365	Felis_catus
ENSPNYG00000003620	polr1c	93	72.783	ENSFALG00000012111	POLR1C	100	72.340	Ficedula_albicollis
ENSPNYG00000003620	polr1c	99	72.779	ENSFDAG00000008428	POLR1C	99	72.365	Fukomys_damarensis
ENSPNYG00000003620	polr1c	100	75.214	ENSFHEG00000000262	polr1c	100	75.783	Fundulus_heteroclitus
ENSPNYG00000003620	polr1c	93	83.232	ENSGMOG00000013878	polr1c	100	82.424	Gadus_morhua
ENSPNYG00000003620	polr1c	100	73.504	ENSGALG00000010349	POLR1C	100	73.088	Gallus_gallus
ENSPNYG00000003620	polr1c	100	89.174	ENSGAFG00000010153	polr1c	100	89.174	Gambusia_affinis
ENSPNYG00000003620	polr1c	100	85.755	ENSGACG00000002453	polr1c	100	85.755	Gasterosteus_aculeatus
ENSPNYG00000003620	polr1c	99	75.504	ENSGAGG00000010640	POLR1C	99	75.072	Gopherus_agassizii
ENSPNYG00000003620	polr1c	99	72.206	ENSGGOG00000010903	POLR1C	99	71.795	Gorilla_gorilla
ENSPNYG00000003620	polr1c	100	89.174	ENSHBUG00000017816	polr1c	100	88.952	Haplochromis_burtoni
ENSPNYG00000003620	polr1c	57	30.392	ENSHBUG00000023040	polr2c	80	30.392	Haplochromis_burtoni
ENSPNYG00000003620	polr1c	99	72.493	ENSHGLG00000019441	POLR1C	100	71.538	Heterocephalus_glaber_female
ENSPNYG00000003620	polr1c	99	72.779	ENSHGLG00100005970	POLR1C	100	71.538	Heterocephalus_glaber_male
ENSPNYG00000003620	polr1c	99	83.668	ENSHCOG00000002179	polr1c	99	83.668	Hippocampus_comes
ENSPNYG00000003620	polr1c	99	82.709	ENSIPUG00000024464	polr1c	99	82.235	Ictalurus_punctatus
ENSPNYG00000003620	polr1c	99	73.066	ENSSTOG00000010631	POLR1C	99	72.650	Ictidomys_tridecemlineatus
ENSPNYG00000003620	polr1c	99	72.493	ENSJJAG00000023110	Polr1c	99	72.080	Jaculus_jaculus
ENSPNYG00000003620	polr1c	100	88.604	ENSKMAG00000014305	polr1c	97	88.604	Kryptolebias_marmoratus
ENSPNYG00000003620	polr1c	100	90.313	ENSLBEG00000014925	polr1c	100	90.313	Labrus_bergylta
ENSPNYG00000003620	polr1c	95	59.403	ENSLACG00000012567	POLR1C	98	59.281	Latimeria_chalumnae
ENSPNYG00000003620	polr1c	100	79.772	ENSLOCG00000016710	polr1c	96	79.320	Lepisosteus_oculatus
ENSPNYG00000003620	polr1c	87	73.770	ENSLAFG00000026248	POLR1C	100	73.529	Loxodonta_africana
ENSPNYG00000003620	polr1c	99	71.920	ENSMFAG00000046295	POLR1C	99	71.633	Macaca_fascicularis
ENSPNYG00000003620	polr1c	99	71.920	ENSMMUG00000015192	POLR1C	99	71.633	Macaca_mulatta
ENSPNYG00000003620	polr1c	99	71.920	ENSMNEG00000028073	POLR1C	99	71.633	Macaca_nemestrina
ENSPNYG00000003620	polr1c	99	71.920	ENSMLEG00000034818	POLR1C	99	71.633	Mandrillus_leucophaeus
ENSPNYG00000003620	polr1c	100	90.598	ENSMAMG00000008700	polr1c	100	90.598	Mastacembelus_armatus
ENSPNYG00000003620	polr1c	100	99.430	ENSMZEG00005018545	polr1c	100	99.430	Maylandia_zebra
ENSPNYG00000003620	polr1c	84	69.492	ENSMGAG00000011020	POLR1C	100	69.024	Meleagris_gallopavo
ENSPNYG00000003620	polr1c	99	71.920	ENSMAUG00000014329	Polr1c	99	71.347	Mesocricetus_auratus
ENSPNYG00000003620	polr1c	99	71.347	ENSMICG00000005027	POLR1C	99	71.246	Microcebus_murinus
ENSPNYG00000003620	polr1c	99	72.493	ENSMOCG00000017549	Polr1c	99	71.920	Microtus_ochrogaster
ENSPNYG00000003620	polr1c	100	72.080	ENSMMOG00000005380	polr1c	100	72.650	Mola_mola
ENSPNYG00000003620	polr1c	84	74.237	ENSMODG00000018964	POLR1C	100	73.898	Monodelphis_domestica
ENSPNYG00000003620	polr1c	100	76.353	ENSMALG00000011711	polr1c	100	76.771	Monopterus_albus
ENSPNYG00000003620	polr1c	99	63.610	MGP_CAROLIEiJ_G0021662	Polr1c	100	71.923	Mus_caroli
ENSPNYG00000003620	polr1c	99	72.493	ENSMUSG00000067148	Polr1c	100	72.308	Mus_musculus
ENSPNYG00000003620	polr1c	99	72.779	MGP_PahariEiJ_G0020654	Polr1c	98	75.248	Mus_pahari
ENSPNYG00000003620	polr1c	99	72.493	MGP_SPRETEiJ_G0022574	Polr1c	100	72.308	Mus_spretus
ENSPNYG00000003620	polr1c	99	72.206	ENSMPUG00000012916	POLR1C	91	71.795	Mustela_putorius_furo
ENSPNYG00000003620	polr1c	99	72.493	ENSMLUG00000017751	POLR1C	99	72.080	Myotis_lucifugus
ENSPNYG00000003620	polr1c	99	73.066	ENSNGAG00000023487	Polr1c	100	73.064	Nannospalax_galili
ENSPNYG00000003620	polr1c	100	98.291	ENSNBRG00000018742	polr1c	100	98.291	Neolamprologus_brichardi
ENSPNYG00000003620	polr1c	99	72.206	ENSNLEG00000004035	POLR1C	99	71.795	Nomascus_leucogenys
ENSPNYG00000003620	polr1c	98	63.081	ENSMEUG00000006778	POLR1C	98	62.791	Notamacropus_eugenii
ENSPNYG00000003620	polr1c	77	71.587	ENSOPRG00000000145	POLR1C	99	71.218	Ochotona_princeps
ENSPNYG00000003620	polr1c	99	73.066	ENSODEG00000015831	-	99	72.650	Octodon_degus
ENSPNYG00000003620	polr1c	62	69.406	ENSODEG00000017109	-	100	69.406	Octodon_degus
ENSPNYG00000003620	polr1c	100	98.291	ENSONIG00000013133	polr1c	98	98.291	Oreochromis_niloticus
ENSPNYG00000003620	polr1c	99	70.774	ENSOANG00000003043	POLR1C	99	70.370	Ornithorhynchus_anatinus
ENSPNYG00000003620	polr1c	99	71.633	ENSOCUG00000005504	POLR1C	99	71.225	Oryctolagus_cuniculus
ENSPNYG00000003620	polr1c	100	83.761	ENSORLG00000019743	polr1c	100	83.761	Oryzias_latipes
ENSPNYG00000003620	polr1c	76	68.889	ENSORLG00020005555	polr1c	81	68.889	Oryzias_latipes_hni
ENSPNYG00000003620	polr1c	100	84.615	ENSORLG00020006489	POLR1C	100	84.615	Oryzias_latipes_hni
ENSPNYG00000003620	polr1c	100	84.046	ENSORLG00015013322	polr1c	100	84.046	Oryzias_latipes_hsok
ENSPNYG00000003620	polr1c	100	84.900	ENSOMEG00000016527	polr1c	100	84.900	Oryzias_melastigma
ENSPNYG00000003620	polr1c	99	73.410	ENSOGAG00000016318	POLR1C	99	72.543	Otolemur_garnettii
ENSPNYG00000003620	polr1c	99	73.066	ENSOARG00000007503	POLR1C	99	72.779	Ovis_aries
ENSPNYG00000003620	polr1c	99	72.206	ENSPPAG00000043678	POLR1C	99	71.795	Pan_paniscus
ENSPNYG00000003620	polr1c	99	72.779	ENSPPRG00000009760	POLR1C	99	72.365	Panthera_pardus
ENSPNYG00000003620	polr1c	99	72.779	ENSPTIG00000014813	POLR1C	99	72.365	Panthera_tigris_altaica
ENSPNYG00000003620	polr1c	99	72.206	ENSPTRG00000018202	POLR1C	99	71.795	Pan_troglodytes
ENSPNYG00000003620	polr1c	99	72.206	ENSPANG00000009025	POLR1C	99	71.920	Papio_anubis
ENSPNYG00000003620	polr1c	100	81.197	ENSPKIG00000009858	polr1c	100	80.737	Paramormyrops_kingsleyae
ENSPNYG00000003620	polr1c	99	75.358	ENSPSIG00000012580	POLR1C	94	74.929	Pelodiscus_sinensis
ENSPNYG00000003620	polr1c	100	73.789	ENSPMGG00000012121	polr1c	100	74.074	Periophthalmus_magnuspinnatus
ENSPNYG00000003620	polr1c	99	71.633	ENSPEMG00000006970	Polr1c	99	71.060	Peromyscus_maniculatus_bairdii
ENSPNYG00000003620	polr1c	61	31.081	ENSPMAG00000004827	polr2c	88	31.797	Petromyzon_marinus
ENSPNYG00000003620	polr1c	99	71.143	ENSPMAG00000005560	polr1c	99	70.857	Petromyzon_marinus
ENSPNYG00000003620	polr1c	98	74.709	ENSPCIG00000028137	POLR1C	97	74.419	Phascolarctos_cinereus
ENSPNYG00000003620	polr1c	100	89.744	ENSPFOG00000014357	polr1c	98	89.744	Poecilia_formosa
ENSPNYG00000003620	polr1c	100	89.744	ENSPFOG00000014342	POLR1C	100	89.744	Poecilia_formosa
ENSPNYG00000003620	polr1c	68	84.100	ENSPLAG00000004111	polr1c	99	84.100	Poecilia_latipinna
ENSPNYG00000003620	polr1c	100	89.744	ENSPMEG00000008420	polr1c	100	89.744	Poecilia_mexicana
ENSPNYG00000003620	polr1c	100	89.744	ENSPMEG00000011877	-	100	89.744	Poecilia_mexicana
ENSPNYG00000003620	polr1c	100	88.319	ENSPREG00000007985	polr1c	100	88.034	Poecilia_reticulata
ENSPNYG00000003620	polr1c	99	71.920	ENSPPYG00000016645	POLR1C	99	71.510	Pongo_abelii
ENSPNYG00000003620	polr1c	99	71.633	ENSPCOG00000024628	POLR1C	99	71.225	Propithecus_coquereli
ENSPNYG00000003620	polr1c	100	67.236	ENSPVAG00000005689	POLR1C	100	67.236	Pteropus_vampyrus
ENSPNYG00000003620	polr1c	100	84.046	ENSPNAG00000008443	polr1c	100	83.569	Pygocentrus_nattereri
ENSPNYG00000003620	polr1c	99	72.206	ENSRNOG00000019079	Polr1c	100	71.154	Rattus_norvegicus
ENSPNYG00000003620	polr1c	99	72.206	ENSRBIG00000007155	POLR1C	99	71.795	Rhinopithecus_bieti
ENSPNYG00000003620	polr1c	99	72.206	ENSRROG00000000257	POLR1C	99	71.795	Rhinopithecus_roxellana
ENSPNYG00000003620	polr1c	92	48.758	YPR110C	RPC40	95	49.068	Saccharomyces_cerevisiae
ENSPNYG00000003620	polr1c	99	72.206	ENSSBOG00000025735	POLR1C	99	71.795	Saimiri_boliviensis_boliviensis
ENSPNYG00000003620	polr1c	98	66.860	ENSSHAG00000014456	POLR1C	98	66.570	Sarcophilus_harrisii
ENSPNYG00000003620	polr1c	100	83.191	ENSSFOG00015019860	polr1c	100	82.720	Scleropages_formosus
ENSPNYG00000003620	polr1c	100	89.744	ENSSMAG00000018865	polr1c	100	89.235	Scophthalmus_maximus
ENSPNYG00000003620	polr1c	100	92.023	ENSSDUG00000015745	polr1c	91	92.023	Seriola_dumerili
ENSPNYG00000003620	polr1c	100	92.023	ENSSLDG00000018285	polr1c	91	92.023	Seriola_lalandi_dorsalis
ENSPNYG00000003620	polr1c	97	73.021	ENSSPUG00000011822	POLR1C	97	72.434	Sphenodon_punctatus
ENSPNYG00000003620	polr1c	100	89.744	ENSSPAG00000022369	polr1c	100	89.744	Stegastes_partitus
ENSPNYG00000003620	polr1c	99	72.493	ENSSSCG00000028007	POLR1C	98	72.080	Sus_scrofa
ENSPNYG00000003620	polr1c	96	73.512	ENSTGUG00000009159	POLR1C	99	73.077	Taeniopygia_guttata
ENSPNYG00000003620	polr1c	100	85.185	ENSTRUG00000006264	polr1c	100	85.185	Takifugu_rubripes
ENSPNYG00000003620	polr1c	51	70.787	ENSTBEG00000002254	POLR1C	100	70.787	Tupaia_belangeri
ENSPNYG00000003620	polr1c	75	71.103	ENSTTRG00000006344	POLR1C	76	71.103	Tursiops_truncatus
ENSPNYG00000003620	polr1c	99	72.779	ENSUAMG00000025602	POLR1C	99	72.365	Ursus_americanus
ENSPNYG00000003620	polr1c	99	72.779	ENSUMAG00000005938	POLR1C	99	72.365	Ursus_maritimus
ENSPNYG00000003620	polr1c	99	69.914	ENSVVUG00000028922	POLR1C	99	69.628	Vulpes_vulpes
ENSPNYG00000003620	polr1c	98	68.588	ENSXETG00000010882	polr1c	99	67.341	Xenopus_tropicalis
ENSPNYG00000003620	polr1c	100	88.319	ENSXCOG00000014185	polr1c	100	87.571	Xiphophorus_couchianus
ENSPNYG00000003620	polr1c	100	89.174	ENSXMAG00000015076	polr1c	100	89.174	Xiphophorus_maculatus