EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000003747 (Gene tree)
Gene ID: 102195189
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein C (C1/C2)
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 10943 bases
Position: chrJH419236.1:1202572-1213514
Accession: 102195189
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000004856	RRM_1	PF00076.22	1.9e-13	1	1
ENSPNYP00000004865	RRM_1	PF00076.22	2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000004984	-	1121	XM_013909820	ENSPNYP00000004865	298 (aa)	XP_013765274	-
ENSPNYT00000004976	-	867	-	ENSPNYP00000004856	288 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000003747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000003747's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000003747	-	96	52.595	ENSPNYG00000003548	-	76	57.895
ENSPNYG00000003747	-	87	82.692	ENSPNYG00000020293	-	87	80.000
ENSPNYG00000003747	-	89	49.815	ENSPNYG00000008772	-	80	52.101
ENSPNYG00000003747	-	90	42.963	ENSPNYG00000011247	raly	61	50.239

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000003747	-	93	47.000	ENSG00000184672	RALYL	92	79.487	Homo_sapiens
ENSPNYG00000003747	-	85	85.490	ENSAPOG00000006963	hnrnpc	85	80.075	Acanthochromis_polyacanthus
ENSPNYG00000003747	-	86	82.375	ENSACIG00000000270	-	99	74.910	Amphilophus_citrinellus
ENSPNYG00000003747	-	97	94.444	ENSACIG00000016568	-	99	90.681	Amphilophus_citrinellus
ENSPNYG00000003747	-	90	92.884	ENSAOCG00000021616	-	99	83.784	Amphiprion_ocellaris
ENSPNYG00000003747	-	85	85.882	ENSAOCG00000003896	-	85	80.451	Amphiprion_ocellaris
ENSPNYG00000003747	-	90	92.884	ENSAPEG00000019962	-	99	83.904	Amphiprion_percula
ENSPNYG00000003747	-	85	85.882	ENSAPEG00000001489	-	85	80.451	Amphiprion_percula
ENSPNYG00000003747	-	86	82.308	ENSATEG00000011734	-	99	73.826	Anabas_testudineus
ENSPNYG00000003747	-	90	92.193	ENSATEG00000018006	-	99	83.972	Anabas_testudineus
ENSPNYG00000003747	-	90	47.059	ENSAPLG00000015574	RALYL	78	54.783	Anas_platyrhynchos
ENSPNYG00000003747	-	90	48.611	ENSACAG00000028464	RALYL	79	54.468	Anolis_carolinensis
ENSPNYG00000003747	-	93	47.458	ENSANAG00000023383	RALYL	78	55.752	Aotus_nancymaae
ENSPNYG00000003747	-	100	99.329	ENSACLG00000005707	-	100	99.329	Astatotilapia_calliptera
ENSPNYG00000003747	-	85	82.353	ENSACLG00000000995	-	81	85.388	Astatotilapia_calliptera
ENSPNYG00000003747	-	85	81.961	ENSACLG00000013636	-	87	79.323	Astatotilapia_calliptera
ENSPNYG00000003747	-	71	77.358	ENSAMXG00000042946	hnrnpc	98	76.042	Astyanax_mexicanus
ENSPNYG00000003747	-	89	78.195	ENSAMXG00000034915	zgc:55733	91	75.188	Astyanax_mexicanus
ENSPNYG00000003747	-	93	47.458	ENSCJAG00000000402	RALYL	78	55.752	Callithrix_jacchus
ENSPNYG00000003747	-	90	48.780	ENSCPOG00000012314	RALYL	79	54.274	Cavia_porcellus
ENSPNYG00000003747	-	93	47.458	ENSCCAG00000025003	RALYL	76	79.487	Cebus_capucinus
ENSPNYG00000003747	-	93	47.000	ENSCATG00000042145	RALYL	78	55.752	Cercocebus_atys
ENSPNYG00000003747	-	90	48.780	ENSCLAG00000005228	RALYL	79	54.274	Chinchilla_lanigera
ENSPNYG00000003747	-	73	55.111	ENSCHOG00000013228	RALYL	75	51.739	Choloepus_hoffmanni
ENSPNYG00000003747	-	93	47.000	ENSCANG00000039144	RALYL	78	55.752	Colobus_angolensis_palliatus
ENSPNYG00000003747	-	90	49.306	ENSCGRG00001009241	Ralyl	79	53.617	Cricetulus_griseus_chok1gshd
ENSPNYG00000003747	-	85	87.352	ENSCSEG00000021349	-	82	83.895	Cynoglossus_semilaevis
ENSPNYG00000003747	-	96	63.973	ENSCSEG00000019769	-	99	63.605	Cynoglossus_semilaevis
ENSPNYG00000003747	-	92	65.108	ENSCVAG00000002797	-	99	55.102	Cyprinodon_variegatus
ENSPNYG00000003747	-	90	88.390	ENSCVAG00000016981	-	81	87.640	Cyprinodon_variegatus
ENSPNYG00000003747	-	83	80.645	ENSDARG00000053810	hnrnpc	99	68.910	Danio_rerio
ENSPNYG00000003747	-	89	80.827	ENSDARG00000103845	zgc:55733	99	70.447	Danio_rerio
ENSPNYG00000003747	-	88	50.709	ENSDORG00000003721	Ralyl	79	54.468	Dipodomys_ordii
ENSPNYG00000003747	-	56	57.803	ENSETEG00000014028	RALYL	82	60.870	Echinops_telfairi
ENSPNYG00000003747	-	78	47.619	ENSEBUG00000006049	RALYL	74	47.418	Eptatretus_burgeri
ENSPNYG00000003747	-	74	48.430	ENSEBUG00000012363	hnrnpc	67	46.696	Eptatretus_burgeri
ENSPNYG00000003747	-	88	50.355	ENSEEUG00000007202	RALYL	80	54.701	Erinaceus_europaeus
ENSPNYG00000003747	-	86	80.443	ENSELUG00000007714	-	99	71.777	Esox_lucius
ENSPNYG00000003747	-	90	80.515	ENSELUG00000004132	-	91	78.309	Esox_lucius
ENSPNYG00000003747	-	96	47.099	ENSFALG00000008647	RALYL	96	57.746	Ficedula_albicollis
ENSPNYG00000003747	-	86	84.559	ENSFHEG00000007278	-	99	69.419	Fundulus_heteroclitus
ENSPNYG00000003747	-	91	76.727	ENSFHEG00000003605	-	88	74.539	Fundulus_heteroclitus
ENSPNYG00000003747	-	75	56.769	ENSGALG00000036938	RALYL	78	54.043	Gallus_gallus
ENSPNYG00000003747	-	97	82.500	ENSGAFG00000020992	-	99	85.000	Gambusia_affinis
ENSPNYG00000003747	-	91	76.364	ENSGAFG00000020486	-	98	67.754	Gambusia_affinis
ENSPNYG00000003747	-	87	86.538	ENSGACG00000017772	-	97	88.189	Gasterosteus_aculeatus
ENSPNYG00000003747	-	77	73.094	ENSGACG00000018932	-	89	68.000	Gasterosteus_aculeatus
ENSPNYG00000003747	-	93	47.000	ENSGGOG00000000841	RALYL	78	55.752	Gorilla_gorilla
ENSPNYG00000003747	-	96	99.652	ENSHBUG00000010527	-	90	99.652	Haplochromis_burtoni
ENSPNYG00000003747	-	85	82.745	ENSHBUG00000018342	-	85	80.075	Haplochromis_burtoni
ENSPNYG00000003747	-	90	48.432	ENSHGLG00000004866	RALYL	79	53.846	Heterocephalus_glaber_female
ENSPNYG00000003747	-	90	48.432	ENSHGLG00100017480	RALYL	79	53.846	Heterocephalus_glaber_male
ENSPNYG00000003747	-	88	86.496	ENSHCOG00000012333	hnrnpc	91	86.022	Hippocampus_comes
ENSPNYG00000003747	-	89	78.195	ENSIPUG00000011271	hnrnpc	98	80.617	Ictalurus_punctatus
ENSPNYG00000003747	-	89	80.451	ENSIPUG00000008666	zgc:55733	99	77.974	Ictalurus_punctatus
ENSPNYG00000003747	-	88	50.000	ENSSTOG00000012583	RALYL	80	54.043	Ictidomys_tridecemlineatus
ENSPNYG00000003747	-	90	89.552	ENSKMAG00000018265	-	99	74.608	Kryptolebias_marmoratus
ENSPNYG00000003747	-	92	78.700	ENSKMAG00000011170	-	84	79.848	Kryptolebias_marmoratus
ENSPNYG00000003747	-	89	89.811	ENSLBEG00000006193	-	99	75.321	Labrus_bergylta
ENSPNYG00000003747	-	91	77.656	ENSLBEG00000006979	-	93	74.545	Labrus_bergylta
ENSPNYG00000003747	-	95	72.203	ENSLBEG00000024418	-	94	70.242	Labrus_bergylta
ENSPNYG00000003747	-	89	70.896	ENSLOCG00000002560	hnrnpc	91	71.481	Lepisosteus_oculatus
ENSPNYG00000003747	-	93	47.000	ENSMNEG00000033288	RALYL	78	55.752	Macaca_nemestrina
ENSPNYG00000003747	-	93	47.000	ENSMLEG00000038284	RALYL	78	55.752	Mandrillus_leucophaeus
ENSPNYG00000003747	-	90	92.193	ENSMAMG00000008033	-	90	92.193	Mastacembelus_armatus
ENSPNYG00000003747	-	85	83.922	ENSMAMG00000012236	-	99	73.883	Mastacembelus_armatus
ENSPNYG00000003747	-	96	99.303	ENSMZEG00005024249	-	90	99.303	Maylandia_zebra
ENSPNYG00000003747	-	85	82.353	ENSMZEG00005020460	-	88	77.567	Maylandia_zebra
ENSPNYG00000003747	-	90	49.306	ENSMAUG00000015149	Ralyl	79	53.617	Mesocricetus_auratus
ENSPNYG00000003747	-	93	47.635	ENSMICG00000005558	RALYL	79	79.487	Microcebus_murinus
ENSPNYG00000003747	-	90	49.306	ENSMOCG00000017371	Ralyl	91	49.632	Microtus_ochrogaster
ENSPNYG00000003747	-	97	83.571	ENSMMOG00000019520	-	100	82.143	Mola_mola
ENSPNYG00000003747	-	89	82.264	ENSMMOG00000021465	-	92	80.755	Mola_mola
ENSPNYG00000003747	-	90	88.015	ENSMALG00000014623	-	84	88.390	Monopterus_albus
ENSPNYG00000003747	-	86	75.097	ENSMALG00000007520	-	99	68.571	Monopterus_albus
ENSPNYG00000003747	-	90	48.611	ENSMUSG00000039717	Ralyl	92	78.205	Mus_musculus
ENSPNYG00000003747	-	90	49.653	ENSMPUG00000010724	RALYL	77	53.913	Mustela_putorius_furo
ENSPNYG00000003747	-	90	49.306	ENSNGAG00000013375	Ralyl	79	53.617	Nannospalax_galili
ENSPNYG00000003747	-	100	96.886	ENSNBRG00000015676	-	100	96.886	Neolamprologus_brichardi
ENSPNYG00000003747	-	87	82.308	ENSNBRG00000004912	-	94	80.349	Neolamprologus_brichardi
ENSPNYG00000003747	-	90	49.640	ENSNLEG00000002702	RALYL	74	55.752	Nomascus_leucogenys
ENSPNYG00000003747	-	62	51.295	ENSOPRG00000013650	-	98	49.215	Ochotona_princeps
ENSPNYG00000003747	-	90	48.780	ENSODEG00000001012	RALYL	79	54.274	Octodon_degus
ENSPNYG00000003747	-	85	83.529	ENSONIG00000007859	-	93	81.319	Oreochromis_niloticus
ENSPNYG00000003747	-	96	98.955	ENSONIG00000018350	-	90	98.955	Oreochromis_niloticus
ENSPNYG00000003747	-	85	72.374	ENSORLG00000009999	-	93	68.621	Oryzias_latipes
ENSPNYG00000003747	-	90	90.146	ENSORLG00000003144	-	98	74.383	Oryzias_latipes
ENSPNYG00000003747	-	85	71.984	ENSORLG00020018228	hnrnpc	93	68.276	Oryzias_latipes_hni
ENSPNYG00000003747	-	85	72.374	ENSORLG00015019755	-	93	68.621	Oryzias_latipes_hsok
ENSPNYG00000003747	-	90	90.146	ENSORLG00015009460	-	98	74.233	Oryzias_latipes_hsok
ENSPNYG00000003747	-	90	92.884	ENSOMEG00000022665	-	83	92.884	Oryzias_melastigma
ENSPNYG00000003747	-	85	73.541	ENSOMEG00000020488	-	97	62.252	Oryzias_melastigma
ENSPNYG00000003747	-	93	47.458	ENSPPAG00000038705	RALYL	78	55.752	Pan_paniscus
ENSPNYG00000003747	-	93	49.495	ENSPPRG00000018612	RALYL	78	55.947	Panthera_pardus
ENSPNYG00000003747	-	93	49.495	ENSPTIG00000020331	RALYL	78	55.947	Panthera_tigris_altaica
ENSPNYG00000003747	-	93	47.000	ENSPTRG00000020381	RALYL	78	55.752	Pan_troglodytes
ENSPNYG00000003747	-	93	47.000	ENSPANG00000029305	RALYL	78	55.752	Papio_anubis
ENSPNYG00000003747	-	90	79.562	ENSPKIG00000008592	-	99	70.978	Paramormyrops_kingsleyae
ENSPNYG00000003747	-	88	78.439	ENSPKIG00000022837	-	97	72.638	Paramormyrops_kingsleyae
ENSPNYG00000003747	-	90	48.966	ENSPSIG00000011135	RALYL	78	54.043	Pelodiscus_sinensis
ENSPNYG00000003747	-	84	72.177	ENSPMGG00000017774	-	95	70.251	Periophthalmus_magnuspinnatus
ENSPNYG00000003747	-	96	82.206	ENSPMGG00000013144	-	99	79.004	Periophthalmus_magnuspinnatus
ENSPNYG00000003747	-	90	49.306	ENSPEMG00000016447	Ralyl	79	53.617	Peromyscus_maniculatus_bairdii
ENSPNYG00000003747	-	73	54.425	ENSPMAG00000002407	RALYL	97	52.679	Petromyzon_marinus
ENSPNYG00000003747	-	91	77.007	ENSPFOG00000001583	-	87	76.015	Poecilia_formosa
ENSPNYG00000003747	-	90	89.888	ENSPFOG00000002643	-	98	76.115	Poecilia_formosa
ENSPNYG00000003747	-	91	75.547	ENSPLAG00000015305	-	87	74.539	Poecilia_latipinna
ENSPNYG00000003747	-	90	89.888	ENSPLAG00000000061	-	98	73.968	Poecilia_latipinna
ENSPNYG00000003747	-	91	78.545	ENSPMEG00000004802	-	86	76.030	Poecilia_mexicana
ENSPNYG00000003747	-	90	89.139	ENSPMEG00000016524	-	98	75.238	Poecilia_mexicana
ENSPNYG00000003747	-	90	89.139	ENSPREG00000001852	-	89	88.390	Poecilia_reticulata
ENSPNYG00000003747	-	85	78.516	ENSPREG00000007928	-	87	75.277	Poecilia_reticulata
ENSPNYG00000003747	-	73	48.571	ENSPPYG00000018710	-	66	73.786	Pongo_abelii
ENSPNYG00000003747	-	88	49.110	ENSPVAG00000010821	RALYL	78	53.419	Pteropus_vampyrus
ENSPNYG00000003747	-	83	80.645	ENSPNAG00000015686	hnrnpc	89	79.026	Pygocentrus_nattereri
ENSPNYG00000003747	-	89	74.539	ENSPNAG00000019200	zgc:55733	86	74.539	Pygocentrus_nattereri
ENSPNYG00000003747	-	90	49.640	ENSRROG00000023925	RALYL	81	77.500	Rhinopithecus_roxellana
ENSPNYG00000003747	-	90	76.557	ENSSFOG00015012015	-	100	75.801	Scleropages_formosus
ENSPNYG00000003747	-	86	78.788	ENSSFOG00015012924	-	80	100.000	Scleropages_formosus
ENSPNYG00000003747	-	85	78.431	ENSSMAG00000013592	-	97	67.434	Scophthalmus_maximus
ENSPNYG00000003747	-	97	82.292	ENSSMAG00000011147	-	100	81.250	Scophthalmus_maximus
ENSPNYG00000003747	-	90	88.015	ENSSDUG00000006730	-	99	74.286	Seriola_dumerili
ENSPNYG00000003747	-	91	81.618	ENSSDUG00000001723	-	86	80.741	Seriola_dumerili
ENSPNYG00000003747	-	90	88.015	ENSSLDG00000007474	-	92	87.266	Seriola_lalandi_dorsalis
ENSPNYG00000003747	-	91	81.985	ENSSLDG00000007454	-	87	81.111	Seriola_lalandi_dorsalis
ENSPNYG00000003747	-	64	73.786	ENSSARG00000002374	RALYL	80	46.288	Sorex_araneus
ENSPNYG00000003747	-	90	93.258	ENSSPAG00000013996	-	84	93.258	Stegastes_partitus
ENSPNYG00000003747	-	91	81.319	ENSSPAG00000023204	-	97	72.697	Stegastes_partitus
ENSPNYG00000003747	-	90	47.917	ENSTGUG00000011689	RALYL	78	55.217	Taeniopygia_guttata
ENSPNYG00000003747	-	89	76.404	ENSTRUG00000020158	-	84	75.581	Takifugu_rubripes
ENSPNYG00000003747	-	86	78.431	ENSTNIG00000000334	-	94	76.718	Tetraodon_nigroviridis
ENSPNYG00000003747	-	86	77.481	ENSTNIG00000007427	-	84	77.099	Tetraodon_nigroviridis
ENSPNYG00000003747	-	73	50.224	ENSTBEG00000005551	RALYL	92	48.319	Tupaia_belangeri
ENSPNYG00000003747	-	90	47.350	ENSTTRG00000015762	RALYL	78	52.838	Tursiops_truncatus
ENSPNYG00000003747	-	90	46.953	ENSVPAG00000008501	RALYL	78	51.327	Vicugna_pacos
ENSPNYG00000003747	-	93	71.174	ENSXCOG00000006552	-	83	69.466	Xiphophorus_couchianus
ENSPNYG00000003747	-	53	90.184	ENSXCOG00000019434	-	69	88.344	Xiphophorus_couchianus
ENSPNYG00000003747	-	90	89.139	ENSXMAG00000022849	-	86	88.390	Xiphophorus_maculatus
ENSPNYG00000003747	-	91	76.727	ENSXMAG00000009333	-	87	74.170	Xiphophorus_maculatus