EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000003796 (Gene tree)
Gene ID: 102211229
Gene Symbol: srsf4
Alias: sfrs4|wu:fb37e02|wu:fj35e06|zgc:152957|zgc:55809
Full Name: serine/arginine-rich splicing factor 6-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 5810 bases
Position: chrJH419298.1:1177432-1183241
Accession: 102211229
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000004897	RRM_1	PF00076.22	3.4e-31	1	2
ENSPNYP00000004897	RRM_1	PF00076.22	3.4e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000005016	-	972	XM_005739732	ENSPNYP00000004897	323 (aa)	XP_005739789	-

Gene Model

Click here to download ENSPNYG00000003796's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000003796's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000003796	srsf4	67	40.928	ENSPNYG00000020651	-	90	40.254
ENSPNYG00000003796	srsf4	56	77.222	ENSPNYG00000004944	-	57	76.111
ENSPNYG00000003796	srsf4	53	43.820	ENSPNYG00000017115	-	66	44.767
ENSPNYG00000003796	srsf4	95	51.923	ENSPNYG00000002669	srsf5b	91	65.323
ENSPNYG00000003796	srsf4	55	76.503	ENSPNYG00000011272	-	51	75.676
ENSPNYG00000003796	srsf4	55	42.553	ENSPNYG00000008644	srsf9	73	42.553

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000003796	srsf4	80	66.667	ENSG00000116350	SRSF4	56	65.233	Homo_sapiens
ENSPNYG00000003796	srsf4	64	92.818	ENSACIG00000018649	srsf4	90	93.548	Amphilophus_citrinellus
ENSPNYG00000003796	srsf4	51	90.909	ENSAOCG00000005997	srsf4	92	89.091	Amphiprion_ocellaris
ENSPNYG00000003796	srsf4	80	83.077	ENSATEG00000005680	srsf4	77	78.599	Anabas_testudineus
ENSPNYG00000003796	srsf4	56	79.121	ENSACLG00000021269	-	51	78.571	Astatotilapia_calliptera
ENSPNYG00000003796	srsf4	100	91.463	ENSACLG00000003395	srsf4	100	91.463	Astatotilapia_calliptera
ENSPNYG00000003796	srsf4	56	88.462	ENSAMXG00000034811	srsf4	69	91.429	Astyanax_mexicanus
ENSPNYG00000003796	srsf4	68	46.694	WBGene00004698	rsp-1	97	50.694	Caenorhabditis_elegans
ENSPNYG00000003796	srsf4	56	85.714	ENSCJAG00000047192	SRSF4	55	65.591	Callithrix_jacchus
ENSPNYG00000003796	srsf4	56	85.714	ENSTSYG00000007903	SRSF4	55	65.942	Carlito_syrichta
ENSPNYG00000003796	srsf4	56	85.714	ENSCATG00000031440	SRSF4	56	65.591	Cercocebus_atys
ENSPNYG00000003796	srsf4	56	85.635	ENSCSAG00000001022	SRSF4	56	65.591	Chlorocebus_sabaeus
ENSPNYG00000003796	srsf4	54	57.838	ENSCING00000011362	-	65	55.376	Ciona_intestinalis
ENSPNYG00000003796	srsf4	56	58.763	ENSCING00000020631	-	80	57.949	Ciona_intestinalis
ENSPNYG00000003796	srsf4	90	42.515	ENSCING00000024718	-	59	53.695	Ciona_intestinalis
ENSPNYG00000003796	srsf4	55	67.232	ENSCSAVG00000002581	-	70	63.536	Ciona_savignyi
ENSPNYG00000003796	srsf4	56	85.635	ENSCANG00000028667	SRSF4	56	65.591	Colobus_angolensis_palliatus
ENSPNYG00000003796	srsf4	56	94.118	ENSCSEG00000010058	srsf4	68	95.588	Cynoglossus_semilaevis
ENSPNYG00000003796	srsf4	56	87.912	ENSDARG00000105293	srsf4	66	94.286	Danio_rerio
ENSPNYG00000003796	srsf4	55	66.120	FBgn0004587	B52	95	62.500	Drosophila_melanogaster
ENSPNYG00000003796	srsf4	55	61.667	ENSEBUG00000001681	srsf4	67	60.894	Eptatretus_burgeri
ENSPNYG00000003796	srsf4	97	64.970	ENSELUG00000017551	srsf4	93	76.154	Esox_lucius
ENSPNYG00000003796	srsf4	56	85.635	ENSFCAG00000027821	SRSF4	51	72.908	Felis_catus
ENSPNYG00000003796	srsf4	56	93.370	ENSFHEG00000007472	srsf4	88	97.561	Fundulus_heteroclitus
ENSPNYG00000003796	srsf4	56	86.188	ENSGMOG00000012906	srsf4	57	86.813	Gadus_morhua
ENSPNYG00000003796	srsf4	91	67.230	ENSGAFG00000018496	srsf4	66	83.607	Gambusia_affinis
ENSPNYG00000003796	srsf4	56	93.407	ENSGACG00000002389	srsf4	56	89.560	Gasterosteus_aculeatus
ENSPNYG00000003796	srsf4	56	85.635	ENSGGOG00000002444	SRSF4	56	65.591	Gorilla_gorilla
ENSPNYG00000003796	srsf4	56	79.121	ENSHBUG00000011326	-	51	78.571	Haplochromis_burtoni
ENSPNYG00000003796	srsf4	63	98.485	ENSHCOG00000012540	srsf4	68	89.730	Hippocampus_comes
ENSPNYG00000003796	srsf4	80	70.139	ENSKMAG00000013631	srsf4	82	77.143	Kryptolebias_marmoratus
ENSPNYG00000003796	srsf4	55	77.901	ENSLOCG00000001442	-	50	77.596	Lepisosteus_oculatus
ENSPNYG00000003796	srsf4	56	85.635	ENSMFAG00000041784	SRSF4	56	65.591	Macaca_fascicularis
ENSPNYG00000003796	srsf4	56	85.635	ENSMNEG00000034931	SRSF4	56	65.591	Macaca_nemestrina
ENSPNYG00000003796	srsf4	56	85.635	ENSMLEG00000031619	SRSF4	56	65.591	Mandrillus_leucophaeus
ENSPNYG00000003796	srsf4	80	71.044	ENSMAMG00000004888	srsf4	69	92.308	Mastacembelus_armatus
ENSPNYG00000003796	srsf4	100	91.463	ENSMZEG00005026275	srsf4	100	91.463	Maylandia_zebra
ENSPNYG00000003796	srsf4	80	74.031	ENSMMOG00000013653	srsf4	84	85.714	Mola_mola
ENSPNYG00000003796	srsf4	56	86.188	ENSMODG00000011052	SRSF4	56	83.516	Monodelphis_domestica
ENSPNYG00000003796	srsf4	79	92.308	ENSMALG00000013392	srsf4	86	85.714	Monopterus_albus
ENSPNYG00000003796	srsf4	56	85.714	ENSNGAG00000012225	Srsf4	54	69.231	Nannospalax_galili
ENSPNYG00000003796	srsf4	56	85.635	ENSNLEG00000009916	SRSF4	56	65.591	Nomascus_leucogenys
ENSPNYG00000003796	srsf4	95	54.114	ENSNLEG00000030787	-	62	67.222	Nomascus_leucogenys
ENSPNYG00000003796	srsf4	53	74.725	ENSORLG00000009430	-	68	76.744	Oryzias_latipes
ENSPNYG00000003796	srsf4	69	79.018	ENSORLG00020016052	srsf4	66	91.758	Oryzias_latipes_hni
ENSPNYG00000003796	srsf4	66	86.574	ENSORLG00015007566	srsf4	83	74.502	Oryzias_latipes_hsok
ENSPNYG00000003796	srsf4	86	65.190	ENSOMEG00000005541	srsf4	51	91.758	Oryzias_melastigma
ENSPNYG00000003796	srsf4	56	85.635	ENSPPAG00000028357	SRSF4	56	65.591	Pan_paniscus
ENSPNYG00000003796	srsf4	56	85.635	ENSPPRG00000016248	SRSF4	51	72.908	Panthera_pardus
ENSPNYG00000003796	srsf4	56	85.635	ENSPTRG00000000445	SRSF4	56	65.591	Pan_troglodytes
ENSPNYG00000003796	srsf4	56	85.635	ENSPANG00000021937	SRSF4	56	65.591	Papio_anubis
ENSPNYG00000003796	srsf4	56	91.099	ENSPMGG00000013436	srsf4	95	83.465	Periophthalmus_magnuspinnatus
ENSPNYG00000003796	srsf4	55	67.956	ENSPMAG00000009397	srsf4	68	67.582	Petromyzon_marinus
ENSPNYG00000003796	srsf4	55	57.459	ENSPMAG00000008001	srsf4	50	46.899	Petromyzon_marinus
ENSPNYG00000003796	srsf4	56	94.505	ENSPFOG00000001306	srsf4	75	75.180	Poecilia_formosa
ENSPNYG00000003796	srsf4	91	70.427	ENSPLAG00000008812	srsf4	81	65.637	Poecilia_latipinna
ENSPNYG00000003796	srsf4	74	98.507	ENSPMEG00000023638	srsf4	53	91.257	Poecilia_mexicana
ENSPNYG00000003796	srsf4	74	98.507	ENSPREG00000009639	srsf4	74	72.830	Poecilia_reticulata
ENSPNYG00000003796	srsf4	56	85.635	ENSPPYG00000001629	SRSF4	56	65.591	Pongo_abelii
ENSPNYG00000003796	srsf4	91	76.254	ENSPNAG00000023844	srsf4	54	86.813	Pygocentrus_nattereri
ENSPNYG00000003796	srsf4	56	85.635	ENSRBIG00000035789	SRSF4	56	65.591	Rhinopithecus_bieti
ENSPNYG00000003796	srsf4	56	85.635	ENSRROG00000029463	SRSF4	56	65.591	Rhinopithecus_roxellana
ENSPNYG00000003796	srsf4	56	85.714	ENSSBOG00000027098	SRSF4	55	65.591	Saimiri_boliviensis_boliviensis
ENSPNYG00000003796	srsf4	57	94.086	ENSSMAG00000001707	srsf4	50	92.391	Scophthalmus_maximus
ENSPNYG00000003796	srsf4	80	80.224	ENSSDUG00000007387	srsf4	81	78.358	Seriola_dumerili
ENSPNYG00000003796	srsf4	56	78.689	ENSSLDG00000009745	srsf4	75	62.934	Seriola_lalandi_dorsalis
ENSPNYG00000003796	srsf4	68	94.203	ENSSPAG00000014538	srsf4	74	97.531	Stegastes_partitus
ENSPNYG00000003796	srsf4	91	79.153	ENSTRUG00000011891	srsf4	80	74.349	Takifugu_rubripes
ENSPNYG00000003796	srsf4	56	72.340	ENSXCOG00000003212	-	75	54.064	Xiphophorus_couchianus
ENSPNYG00000003796	srsf4	56	93.989	ENSXCOG00000018826	srsf4	89	88.983	Xiphophorus_couchianus