EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000003815 (Gene tree)
Gene ID: 102207636
Gene Symbol: xrcc6
Alias: Ku autoantigen|Ku70|g22p1|wu:fi87b06|zgc:64131
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 5971 bases
Position: chrJH419210.1:3168805-3174775
Accession: 102207636
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000004920	SAP	PF02037.27	9.5e-10	1	1
ENSPNYP00000004940	SAP	PF02037.27	1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000005064	-	2371	XM_005721782	ENSPNYP00000004940	641 (aa)	XP_005721839	-
ENSPNYT00000005041	-	2306	-	ENSPNYP00000004920	645 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000003815's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000003815's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000003815	xrcc6	99	53.521	ENSG00000196419	XRCC6	99	56.414	Homo_sapiens
ENSPNYG00000003815	xrcc6	99	83.594	ENSAPOG00000012704	xrcc6	100	87.849	Acanthochromis_polyacanthus
ENSPNYG00000003815	xrcc6	100	87.988	ENSACIG00000021277	xrcc6	100	92.459	Amphilophus_citrinellus
ENSPNYG00000003815	xrcc6	100	83.463	ENSAOCG00000021344	xrcc6	100	87.705	Amphiprion_ocellaris
ENSPNYG00000003815	xrcc6	100	83.619	ENSAPEG00000020712	xrcc6	100	87.869	Amphiprion_percula
ENSPNYG00000003815	xrcc6	100	84.555	ENSATEG00000007119	xrcc6	100	88.852	Anabas_testudineus
ENSPNYG00000003815	xrcc6	90	57.192	ENSAPLG00000004469	XRCC6	98	60.550	Anas_platyrhynchos
ENSPNYG00000003815	xrcc6	99	45.794	ENSANAG00000023445	-	99	48.118	Aotus_nancymaae
ENSPNYG00000003815	xrcc6	99	47.418	ENSANAG00000035230	-	99	50.164	Aotus_nancymaae
ENSPNYG00000003815	xrcc6	99	53.521	ENSANAG00000018684	XRCC6	98	57.353	Aotus_nancymaae
ENSPNYG00000003815	xrcc6	99	47.642	ENSANAG00000020017	-	99	50.083	Aotus_nancymaae
ENSPNYG00000003815	xrcc6	100	94.852	ENSACLG00000018608	xrcc6	100	99.672	Astatotilapia_calliptera
ENSPNYG00000003815	xrcc6	99	74.022	ENSAMXG00000007545	xrcc6	99	77.632	Astyanax_mexicanus
ENSPNYG00000003815	xrcc6	99	53.521	ENSCJAG00000045512	XRCC6	99	56.250	Callithrix_jacchus
ENSPNYG00000003815	xrcc6	99	52.582	ENSTSYG00000011348	XRCC6	99	55.428	Carlito_syrichta
ENSPNYG00000003815	xrcc6	99	43.349	ENSCCAG00000035711	-	99	45.559	Cebus_capucinus
ENSPNYG00000003815	xrcc6	99	45.283	ENSCCAG00000037663	-	96	47.438	Cebus_capucinus
ENSPNYG00000003815	xrcc6	99	50.704	ENSCCAG00000030041	-	94	53.454	Cebus_capucinus
ENSPNYG00000003815	xrcc6	92	54.839	ENSCCAG00000030468	-	99	54.839	Cebus_capucinus
ENSPNYG00000003815	xrcc6	99	53.521	ENSCATG00000042366	XRCC6	99	56.414	Cercocebus_atys
ENSPNYG00000003815	xrcc6	99	53.448	ENSCLAG00000016669	XRCC6	99	56.343	Chinchilla_lanigera
ENSPNYG00000003815	xrcc6	99	53.521	ENSCSAG00000005784	XRCC6	99	56.414	Chlorocebus_sabaeus
ENSPNYG00000003815	xrcc6	99	55.956	ENSCPBG00000020535	XRCC6	99	58.484	Chrysemys_picta_bellii
ENSPNYG00000003815	xrcc6	98	33.597	ENSCING00000000633	-	95	34.940	Ciona_intestinalis
ENSPNYG00000003815	xrcc6	99	53.521	ENSCANG00000031032	XRCC6	99	56.414	Colobus_angolensis_palliatus
ENSPNYG00000003815	xrcc6	99	50.078	ENSCGRG00001019029	Xrcc6	99	52.640	Cricetulus_griseus_chok1gshd
ENSPNYG00000003815	xrcc6	99	53.846	ENSCGRG00000001528	Xrcc6	99	56.601	Cricetulus_griseus_crigri
ENSPNYG00000003815	xrcc6	100	76.599	ENSCSEG00000020434	xrcc6	100	80.492	Cynoglossus_semilaevis
ENSPNYG00000003815	xrcc6	100	80.967	ENSCVAG00000002189	xrcc6	100	85.082	Cyprinodon_variegatus
ENSPNYG00000003815	xrcc6	99	71.406	ENSDARG00000071551	xrcc6	99	75.205	Danio_rerio
ENSPNYG00000003815	xrcc6	78	49.231	ENSETEG00000015333	-	67	52.683	Echinops_telfairi
ENSPNYG00000003815	xrcc6	99	52.351	ENSEASG00005001514	XRCC6	99	55.025	Equus_asinus_asinus
ENSPNYG00000003815	xrcc6	99	52.351	ENSECAG00000017563	XRCC6	99	55.437	Equus_caballus
ENSPNYG00000003815	xrcc6	100	71.451	ENSELUG00000020301	xrcc6	100	75.082	Esox_lucius
ENSPNYG00000003815	xrcc6	99	56.075	ENSFALG00000011908	XRCC6	96	59.083	Ficedula_albicollis
ENSPNYG00000003815	xrcc6	100	82.527	ENSFHEG00000016833	xrcc6	100	86.721	Fundulus_heteroclitus
ENSPNYG00000003815	xrcc6	85	80.077	ENSGMOG00000013524	xrcc6	100	68.730	Gadus_morhua
ENSPNYG00000003815	xrcc6	99	55.210	ENSGALG00000011932	XRCC6	99	58.170	Gallus_gallus
ENSPNYG00000003815	xrcc6	100	79.563	ENSGAFG00000008130	xrcc6	100	83.607	Gambusia_affinis
ENSPNYG00000003815	xrcc6	99	79.535	ENSGACG00000004868	xrcc6	99	82.334	Gasterosteus_aculeatus
ENSPNYG00000003815	xrcc6	99	55.799	ENSGAGG00000017518	XRCC6	99	58.320	Gopherus_agassizii
ENSPNYG00000003815	xrcc6	99	53.521	ENSGGOG00000015885	XRCC6	99	56.414	Gorilla_gorilla
ENSPNYG00000003815	xrcc6	88	99.293	ENSHBUG00000023281	xrcc6	100	99.293	Haplochromis_burtoni
ENSPNYG00000003815	xrcc6	99	52.590	ENSHGLG00000018078	XRCC6	99	55.116	Heterocephalus_glaber_female
ENSPNYG00000003815	xrcc6	99	52.590	ENSHGLG00100011264	XRCC6	99	55.116	Heterocephalus_glaber_male
ENSPNYG00000003815	xrcc6	100	75.975	ENSHCOG00000009821	xrcc6	100	79.836	Hippocampus_comes
ENSPNYG00000003815	xrcc6	99	72.144	ENSIPUG00000000767	xrcc6	99	75.658	Ictalurus_punctatus
ENSPNYG00000003815	xrcc6	99	53.292	ENSSTOG00000009490	XRCC6	99	55.684	Ictidomys_tridecemlineatus
ENSPNYG00000003815	xrcc6	99	48.670	ENSJJAG00000017136	Xrcc6	99	52.381	Jaculus_jaculus
ENSPNYG00000003815	xrcc6	99	81.562	ENSKMAG00000002141	xrcc6	99	85.714	Kryptolebias_marmoratus
ENSPNYG00000003815	xrcc6	99	82.003	ENSLBEG00000002691	xrcc6	99	86.184	Labrus_bergylta
ENSPNYG00000003815	xrcc6	87	68.367	ENSLOCG00000011533	xrcc6	99	68.367	Lepisosteus_oculatus
ENSPNYG00000003815	xrcc6	99	53.521	ENSMFAG00000003352	XRCC6	99	56.414	Macaca_fascicularis
ENSPNYG00000003815	xrcc6	99	53.521	ENSMMUG00000001856	XRCC6	99	56.414	Macaca_mulatta
ENSPNYG00000003815	xrcc6	99	53.521	ENSMNEG00000035076	XRCC6	99	56.414	Macaca_nemestrina
ENSPNYG00000003815	xrcc6	99	53.521	ENSMLEG00000019869	XRCC6	99	56.414	Mandrillus_leucophaeus
ENSPNYG00000003815	xrcc6	100	80.841	ENSMAMG00000003368	xrcc6	100	84.943	Mastacembelus_armatus
ENSPNYG00000003815	xrcc6	96	79.612	ENSMAMG00000003405	xrcc6	97	83.788	Mastacembelus_armatus
ENSPNYG00000003815	xrcc6	100	94.696	ENSMZEG00005028080	xrcc6	100	99.508	Maylandia_zebra
ENSPNYG00000003815	xrcc6	99	55.745	ENSMGAG00000012146	XRCC6	99	58.766	Meleagris_gallopavo
ENSPNYG00000003815	xrcc6	99	53.846	ENSMAUG00000017340	Xrcc6	99	56.601	Mesocricetus_auratus
ENSPNYG00000003815	xrcc6	99	53.532	ENSMOCG00000015717	Xrcc6	99	56.436	Microtus_ochrogaster
ENSPNYG00000003815	xrcc6	100	79.563	ENSMMOG00000003536	xrcc6	99	83.607	Mola_mola
ENSPNYG00000003815	xrcc6	100	82.527	ENSMALG00000013912	xrcc6	98	85.440	Monopterus_albus
ENSPNYG00000003815	xrcc6	99	51.014	MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.607	Mus_caroli
ENSPNYG00000003815	xrcc6	99	54.446	ENSMUSG00000022471	Xrcc6	99	59.696	Mus_musculus
ENSPNYG00000003815	xrcc6	99	54.134	MGP_PahariEiJ_G0020069	Xrcc6	99	56.885	Mus_pahari
ENSPNYG00000003815	xrcc6	96	54.797	MGP_SPRETEiJ_G0020967	Xrcc6	99	57.705	Mus_spretus
ENSPNYG00000003815	xrcc6	99	53.061	ENSNGAG00000013750	Xrcc6	99	55.611	Nannospalax_galili
ENSPNYG00000003815	xrcc6	100	93.448	ENSNBRG00000004125	xrcc6	100	98.197	Neolamprologus_brichardi
ENSPNYG00000003815	xrcc6	95	53.846	ENSOPRG00000002386	XRCC6	99	56.724	Ochotona_princeps
ENSPNYG00000003815	xrcc6	99	52.804	ENSODEG00000015847	XRCC6	99	55.483	Octodon_degus
ENSPNYG00000003815	xrcc6	100	92.356	ENSONIG00000019715	xrcc6	100	97.049	Oreochromis_niloticus
ENSPNYG00000003815	xrcc6	69	53.950	ENSOANG00000011328	XRCC6	99	58.010	Ornithorhynchus_anatinus
ENSPNYG00000003815	xrcc6	99	52.821	ENSOCUG00000006948	XRCC6	99	55.519	Oryctolagus_cuniculus
ENSPNYG00000003815	xrcc6	100	80.685	ENSORLG00020007820	xrcc6	100	84.779	Oryzias_latipes_hni
ENSPNYG00000003815	xrcc6	100	80.374	ENSORLG00015006406	xrcc6	100	84.452	Oryzias_latipes_hsok
ENSPNYG00000003815	xrcc6	100	81.153	ENSOMEG00000008998	xrcc6	100	85.270	Oryzias_melastigma
ENSPNYG00000003815	xrcc6	99	53.292	ENSOGAG00000008821	XRCC6	99	55.519	Otolemur_garnettii
ENSPNYG00000003815	xrcc6	86	57.143	ENSPPAG00000037167	XRCC6	99	58.333	Pan_paniscus
ENSPNYG00000003815	xrcc6	99	53.521	ENSPTRG00000022548	XRCC6	99	56.414	Pan_troglodytes
ENSPNYG00000003815	xrcc6	99	53.521	ENSPTRG00000045824	XRCC6	99	56.414	Pan_troglodytes
ENSPNYG00000003815	xrcc6	99	53.365	ENSPANG00000001252	XRCC6	97	60.088	Papio_anubis
ENSPNYG00000003815	xrcc6	99	68.232	ENSPKIG00000003974	xrcc6	99	71.546	Paramormyrops_kingsleyae
ENSPNYG00000003815	xrcc6	99	77.093	ENSPMGG00000014220	xrcc6	100	81.229	Periophthalmus_magnuspinnatus
ENSPNYG00000003815	xrcc6	99	53.689	ENSPEMG00000023446	Xrcc6	99	56.436	Peromyscus_maniculatus_bairdii
ENSPNYG00000003815	xrcc6	99	54.702	ENSPCIG00000026409	XRCC6	99	57.331	Phascolarctos_cinereus
ENSPNYG00000003815	xrcc6	100	81.435	ENSPFOG00000017173	xrcc6	100	85.574	Poecilia_formosa
ENSPNYG00000003815	xrcc6	100	80.967	ENSPLAG00000000562	xrcc6	100	85.082	Poecilia_latipinna
ENSPNYG00000003815	xrcc6	100	81.279	ENSPMEG00000018478	xrcc6	100	85.410	Poecilia_mexicana
ENSPNYG00000003815	xrcc6	100	81.337	ENSPREG00000020957	xrcc6	95	84.839	Poecilia_reticulata
ENSPNYG00000003815	xrcc6	99	48.200	ENSPPYG00000011876	XRCC6	99	50.822	Pongo_abelii
ENSPNYG00000003815	xrcc6	99	53.218	ENSPVAG00000001168	XRCC6	99	55.446	Pteropus_vampyrus
ENSPNYG00000003815	xrcc6	99	53.510	ENSRNOG00000006392	Xrcc6	99	56.393	Rattus_norvegicus
ENSPNYG00000003815	xrcc6	99	49.452	ENSRBIG00000039794	XRCC6	99	52.138	Rhinopithecus_bieti
ENSPNYG00000003815	xrcc6	99	53.521	ENSRROG00000030297	XRCC6	99	56.414	Rhinopithecus_roxellana
ENSPNYG00000003815	xrcc6	68	47.706	ENSSBOG00000024724	-	98	51.358	Saimiri_boliviensis_boliviensis
ENSPNYG00000003815	xrcc6	99	53.991	ENSSHAG00000010790	XRCC6	99	56.579	Sarcophilus_harrisii
ENSPNYG00000003815	xrcc6	99	70.110	ENSSFOG00015014409	xrcc6	99	73.520	Scleropages_formosus
ENSPNYG00000003815	xrcc6	100	83.307	ENSSMAG00000006496	xrcc6	100	87.541	Scophthalmus_maximus
ENSPNYG00000003815	xrcc6	100	84.243	ENSSDUG00000007542	xrcc6	100	88.525	Seriola_dumerili
ENSPNYG00000003815	xrcc6	100	83.619	ENSSLDG00000009974	xrcc6	100	87.869	Seriola_lalandi_dorsalis
ENSPNYG00000003815	xrcc6	99	55.556	ENSSPUG00000012086	XRCC6	99	58.553	Sphenodon_punctatus
ENSPNYG00000003815	xrcc6	100	83.151	ENSSPAG00000015199	xrcc6	100	87.377	Stegastes_partitus
ENSPNYG00000003815	xrcc6	95	57.096	ENSTGUG00000009852	-	94	60.241	Taeniopygia_guttata
ENSPNYG00000003815	xrcc6	99	75.469	ENSTRUG00000017070	xrcc6	99	79.803	Takifugu_rubripes
ENSPNYG00000003815	xrcc6	96	75.563	ENSTNIG00000012947	xrcc6	99	79.526	Tetraodon_nigroviridis
ENSPNYG00000003815	xrcc6	95	50.082	ENSTBEG00000011736	XRCC6	99	52.759	Tupaia_belangeri
ENSPNYG00000003815	xrcc6	91	51.073	ENSTTRG00000006749	XRCC6	90	53.271	Tursiops_truncatus
ENSPNYG00000003815	xrcc6	100	81.279	ENSXMAG00000009691	xrcc6	100	85.410	Xiphophorus_maculatus