EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000003878 (Gene tree)
Gene ID: 102207752
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 50071 bases
Position: chrJH419226.1:761876-811946
Accession: 102207752
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000004990	SHQ1	PF04925.15	4.1e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000005115	-	2642	XM_005726616	ENSPNYP00000004990	602 (aa)	XP_005726673	UPI0003AF7FBE

Gene Model

Click here to download ENSPNYG00000003878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000003878's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000003878	shq1	68	61.391	ENSG00000144736	SHQ1	96	68.750	Homo_sapiens
ENSPNYG00000003878	shq1	100	78.069	ENSAPOG00000000397	shq1	100	77.741	Acanthochromis_polyacanthus
ENSPNYG00000003878	shq1	92	50.524	ENSAMEG00000015140	SHQ1	76	59.725	Ailuropoda_melanoleuca
ENSPNYG00000003878	shq1	100	87.252	ENSACIG00000021249	shq1	100	84.768	Amphilophus_citrinellus
ENSPNYG00000003878	shq1	100	78.664	ENSAOCG00000023311	shq1	100	78.339	Amphiprion_ocellaris
ENSPNYG00000003878	shq1	100	78.689	ENSAPEG00000021686	shq1	100	78.361	Amphiprion_percula
ENSPNYG00000003878	shq1	99	74.172	ENSATEG00000008475	shq1	99	73.675	Anabas_testudineus
ENSPNYG00000003878	shq1	68	57.957	ENSAPLG00000013926	SHQ1	86	58.314	Anas_platyrhynchos
ENSPNYG00000003878	shq1	70	61.485	ENSACAG00000014809	SHQ1	66	61.211	Anolis_carolinensis
ENSPNYG00000003878	shq1	78	41.915	ENSANAG00000030500	-	74	43.448	Aotus_nancymaae
ENSPNYG00000003878	shq1	78	57.350	ENSANAG00000029241	SHQ1	76	60.090	Aotus_nancymaae
ENSPNYG00000003878	shq1	100	99.003	ENSACLG00000023077	shq1	96	99.003	Astatotilapia_calliptera
ENSPNYG00000003878	shq1	71	64.169	ENSAMXG00000043822	shq1	98	54.785	Astyanax_mexicanus
ENSPNYG00000003878	shq1	80	57.927	ENSBTAG00000005436	SHQ1	76	60.449	Bos_taurus
ENSPNYG00000003878	shq1	68	60.911	ENSCJAG00000015131	SHQ1	76	60.090	Callithrix_jacchus
ENSPNYG00000003878	shq1	74	58.114	ENSCAFG00000006434	SHQ1	76	59.865	Canis_familiaris
ENSPNYG00000003878	shq1	65	60.401	ENSCAFG00020016743	SHQ1	76	60.090	Canis_lupus_dingo
ENSPNYG00000003878	shq1	94	52.405	ENSCHIG00000012271	SHQ1	69	60.811	Capra_hircus
ENSPNYG00000003878	shq1	68	57.627	ENSTSYG00000014439	SHQ1	77	56.885	Carlito_syrichta
ENSPNYG00000003878	shq1	86	47.206	ENSCAPG00000009343	SHQ1	71	54.856	Cavia_aperea
ENSPNYG00000003878	shq1	94	48.557	ENSCPOG00000011443	SHQ1	74	59.954	Cavia_porcellus
ENSPNYG00000003878	shq1	68	52.885	ENSCCAG00000027080	SHQ1	75	51.345	Cebus_capucinus
ENSPNYG00000003878	shq1	78	43.737	ENSCCAG00000036087	-	74	44.954	Cebus_capucinus
ENSPNYG00000003878	shq1	68	62.110	ENSCATG00000041238	SHQ1	76	61.211	Cercocebus_atys
ENSPNYG00000003878	shq1	72	59.326	ENSCLAG00000004206	SHQ1	76	59.417	Chinchilla_lanigera
ENSPNYG00000003878	shq1	53	60.061	ENSCSAG00000011514	SHQ1	72	59.104	Chlorocebus_sabaeus
ENSPNYG00000003878	shq1	71	58.409	ENSCPBG00000006441	SHQ1	71	59.729	Chrysemys_picta_bellii
ENSPNYG00000003878	shq1	65	42.278	ENSCING00000008013	-	95	41.014	Ciona_intestinalis
ENSPNYG00000003878	shq1	65	40.051	ENSCSAVG00000002332	-	99	39.540	Ciona_savignyi
ENSPNYG00000003878	shq1	80	56.000	ENSCANG00000039295	SHQ1	77	60.762	Colobus_angolensis_palliatus
ENSPNYG00000003878	shq1	72	58.969	ENSCGRG00001012583	Shq1	78	58.202	Cricetulus_griseus_chok1gshd
ENSPNYG00000003878	shq1	72	58.969	ENSCGRG00000009849	Shq1	78	58.202	Cricetulus_griseus_crigri
ENSPNYG00000003878	shq1	98	70.115	ENSCSEG00000007829	shq1	98	70.115	Cynoglossus_semilaevis
ENSPNYG00000003878	shq1	99	70.184	ENSCVAG00000020049	shq1	99	71.189	Cyprinodon_variegatus
ENSPNYG00000003878	shq1	98	53.719	ENSDARG00000058522	shq1	98	52.581	Danio_rerio
ENSPNYG00000003878	shq1	92	50.000	ENSDNOG00000033937	SHQ1	75	60.731	Dasypus_novemcinctus
ENSPNYG00000003878	shq1	68	54.197	ENSETEG00000005766	SHQ1	76	53.196	Echinops_telfairi
ENSPNYG00000003878	shq1	61	47.861	ENSEBUG00000005445	shq1	79	48.580	Eptatretus_burgeri
ENSPNYG00000003878	shq1	78	58.714	ENSEASG00005002237	SHQ1	81	59.402	Equus_asinus_asinus
ENSPNYG00000003878	shq1	78	58.714	ENSECAG00000015673	SHQ1	79	59.402	Equus_caballus
ENSPNYG00000003878	shq1	72	60.948	ENSEEUG00000010568	SHQ1	77	60.762	Erinaceus_europaeus
ENSPNYG00000003878	shq1	98	61.513	ENSELUG00000003476	shq1	99	61.779	Esox_lucius
ENSPNYG00000003878	shq1	78	57.261	ENSFCAG00000012781	SHQ1	77	60.360	Felis_catus
ENSPNYG00000003878	shq1	68	59.712	ENSFDAG00000005595	SHQ1	67	59.361	Fukomys_damarensis
ENSPNYG00000003878	shq1	98	70.370	ENSFHEG00000017552	shq1	100	70.370	Fundulus_heteroclitus
ENSPNYG00000003878	shq1	65	76.093	ENSGMOG00000007350	shq1	100	75.578	Gadus_morhua
ENSPNYG00000003878	shq1	99	48.788	ENSGALG00000007798	SHQ1	71	60.321	Gallus_gallus
ENSPNYG00000003878	shq1	65	80.720	ENSGACG00000011797	shq1	100	80.463	Gasterosteus_aculeatus
ENSPNYG00000003878	shq1	68	61.391	ENSGGOG00000034818	SHQ1	76	60.538	Gorilla_gorilla
ENSPNYG00000003878	shq1	100	99.003	ENSHBUG00000010857	shq1	100	99.003	Haplochromis_burtoni
ENSPNYG00000003878	shq1	92	48.969	ENSHGLG00000003637	SHQ1	68	59.589	Heterocephalus_glaber_female
ENSPNYG00000003878	shq1	92	49.138	ENSHGLG00100011957	SHQ1	68	59.589	Heterocephalus_glaber_male
ENSPNYG00000003878	shq1	99	63.987	ENSHCOG00000010799	shq1	99	63.149	Hippocampus_comes
ENSPNYG00000003878	shq1	94	56.415	ENSIPUG00000001247	shq1	92	56.063	Ictalurus_punctatus
ENSPNYG00000003878	shq1	68	59.189	ENSSTOG00000010043	SHQ1	81	57.399	Ictidomys_tridecemlineatus
ENSPNYG00000003878	shq1	78	55.833	ENSJJAG00000017611	Shq1	81	57.602	Jaculus_jaculus
ENSPNYG00000003878	shq1	100	71.570	ENSKMAG00000004457	shq1	100	71.240	Kryptolebias_marmoratus
ENSPNYG00000003878	shq1	71	63.039	ENSLACG00000014243	SHQ1	66	63.039	Latimeria_chalumnae
ENSPNYG00000003878	shq1	99	55.906	ENSLOCG00000009970	shq1	99	55.748	Lepisosteus_oculatus
ENSPNYG00000003878	shq1	68	61.871	ENSMFAG00000039148	SHQ1	76	60.987	Macaca_fascicularis
ENSPNYG00000003878	shq1	68	43.269	ENSMFAG00000037396	-	74	42.825	Macaca_fascicularis
ENSPNYG00000003878	shq1	68	43.198	ENSMMUG00000021761	-	74	42.825	Macaca_mulatta
ENSPNYG00000003878	shq1	60	60.976	ENSMMUG00000009571	SHQ1	71	60.050	Macaca_mulatta
ENSPNYG00000003878	shq1	68	61.871	ENSMNEG00000032667	SHQ1	76	60.987	Macaca_nemestrina
ENSPNYG00000003878	shq1	68	61.871	ENSMLEG00000038493	SHQ1	76	60.987	Mandrillus_leucophaeus
ENSPNYG00000003878	shq1	99	75.856	ENSMAMG00000023432	shq1	95	75.204	Mastacembelus_armatus
ENSPNYG00000003878	shq1	100	98.837	ENSMZEG00005008649	shq1	100	98.837	Maylandia_zebra
ENSPNYG00000003878	shq1	71	59.909	ENSMGAG00000009640	SHQ1	72	60.183	Meleagris_gallopavo
ENSPNYG00000003878	shq1	72	59.193	ENSMAUG00000022030	Shq1	78	58.427	Mesocricetus_auratus
ENSPNYG00000003878	shq1	95	50.168	ENSMICG00000009224	SHQ1	76	59.641	Microcebus_murinus
ENSPNYG00000003878	shq1	73	59.911	ENSMOCG00000017836	Shq1	78	58.520	Microtus_ochrogaster
ENSPNYG00000003878	shq1	98	69.449	ENSMMOG00000010569	shq1	99	69.282	Mola_mola
ENSPNYG00000003878	shq1	78	55.714	ENSMODG00000003926	SHQ1	78	59.132	Monodelphis_domestica
ENSPNYG00000003878	shq1	99	74.709	ENSMALG00000008870	shq1	99	74.376	Monopterus_albus
ENSPNYG00000003878	shq1	72	58.427	MGP_CAROLIEiJ_G0028689	Shq1	78	57.978	Mus_caroli
ENSPNYG00000003878	shq1	78	56.458	ENSMUSG00000035378	Shq1	78	57.978	Mus_musculus
ENSPNYG00000003878	shq1	73	58.370	MGP_PahariEiJ_G0022440	Shq1	78	58.296	Mus_pahari
ENSPNYG00000003878	shq1	78	56.667	MGP_SPRETEiJ_G0029717	Shq1	78	58.202	Mus_spretus
ENSPNYG00000003878	shq1	92	50.260	ENSMPUG00000017006	SHQ1	75	59.551	Mustela_putorius_furo
ENSPNYG00000003878	shq1	66	58.272	ENSMLUG00000013539	SHQ1	74	59.231	Myotis_lucifugus
ENSPNYG00000003878	shq1	78	49.474	ENSNGAG00000023317	Shq1	77	52.273	Nannospalax_galili
ENSPNYG00000003878	shq1	85	98.246	ENSNBRG00000024004	shq1	100	98.246	Neolamprologus_brichardi
ENSPNYG00000003878	shq1	79	57.085	ENSNLEG00000002731	SHQ1	76	60.762	Nomascus_leucogenys
ENSPNYG00000003878	shq1	69	54.630	ENSMEUG00000009350	-	70	54.630	Notamacropus_eugenii
ENSPNYG00000003878	shq1	74	58.901	ENSODEG00000009192	SHQ1	81	59.865	Octodon_degus
ENSPNYG00000003878	shq1	99	97.671	ENSONIG00000020264	shq1	100	97.671	Oreochromis_niloticus
ENSPNYG00000003878	shq1	95	51.695	ENSOCUG00000016695	SHQ1	76	60.762	Oryctolagus_cuniculus
ENSPNYG00000003878	shq1	99	65.159	ENSORLG00000023538	shq1	99	64.322	Oryzias_latipes
ENSPNYG00000003878	shq1	99	65.882	ENSORLG00020003697	shq1	99	65.042	Oryzias_latipes_hni
ENSPNYG00000003878	shq1	99	64.657	ENSORLG00015021040	shq1	99	64.154	Oryzias_latipes_hsok
ENSPNYG00000003878	shq1	95	68.000	ENSOMEG00000001225	shq1	97	67.304	Oryzias_melastigma
ENSPNYG00000003878	shq1	78	56.757	ENSOGAG00000003898	SHQ1	78	59.688	Otolemur_garnettii
ENSPNYG00000003878	shq1	68	60.859	ENSOARG00000009547	SHQ1	76	60.090	Ovis_aries
ENSPNYG00000003878	shq1	78	41.615	ENSPPAG00000043263	-	73	42.989	Pan_paniscus
ENSPNYG00000003878	shq1	68	61.631	ENSPPAG00000027714	SHQ1	76	60.762	Pan_paniscus
ENSPNYG00000003878	shq1	94	50.676	ENSPPRG00000004769	SHQ1	76	60.360	Panthera_pardus
ENSPNYG00000003878	shq1	94	48.211	ENSPTIG00000011478	SHQ1	75	57.078	Panthera_tigris_altaica
ENSPNYG00000003878	shq1	78	40.664	ENSPTRG00000048303	-	73	41.935	Pan_troglodytes
ENSPNYG00000003878	shq1	68	61.631	ENSPTRG00000015106	SHQ1	76	60.762	Pan_troglodytes
ENSPNYG00000003878	shq1	68	61.058	ENSPANG00000002881	SHQ1	76	61.211	Papio_anubis
ENSPNYG00000003878	shq1	99	55.941	ENSPKIG00000021517	shq1	75	67.898	Paramormyrops_kingsleyae
ENSPNYG00000003878	shq1	72	58.520	ENSPSIG00000005536	SHQ1	73	59.152	Pelodiscus_sinensis
ENSPNYG00000003878	shq1	99	59.464	ENSPMGG00000008838	shq1	100	60.302	Periophthalmus_magnuspinnatus
ENSPNYG00000003878	shq1	65	60.750	ENSPEMG00000000251	Shq1	76	58.581	Peromyscus_maniculatus_bairdii
ENSPNYG00000003878	shq1	72	58.108	ENSPMAG00000005372	shq1	99	57.658	Petromyzon_marinus
ENSPNYG00000003878	shq1	92	67.748	ENSPFOG00000003118	shq1	99	68.345	Poecilia_formosa
ENSPNYG00000003878	shq1	77	65.517	ENSPMEG00000011076	shq1	98	66.749	Poecilia_mexicana
ENSPNYG00000003878	shq1	83	67.131	ENSPREG00000000591	shq1	92	67.197	Poecilia_reticulata
ENSPNYG00000003878	shq1	78	56.907	ENSPPYG00000013717	SHQ1	76	60.538	Pongo_abelii
ENSPNYG00000003878	shq1	68	61.190	ENSPCAG00000009035	SHQ1	77	60.538	Procavia_capensis
ENSPNYG00000003878	shq1	68	61.631	ENSPCOG00000008415	SHQ1	76	60.762	Propithecus_coquereli
ENSPNYG00000003878	shq1	92	51.826	ENSPVAG00000017392	SHQ1	77	60.225	Pteropus_vampyrus
ENSPNYG00000003878	shq1	98	57.869	ENSPNAG00000026840	shq1	99	57.536	Pygocentrus_nattereri
ENSPNYG00000003878	shq1	72	59.551	ENSRNOG00000005433	Shq1	73	58.652	Rattus_norvegicus
ENSPNYG00000003878	shq1	79	54.825	ENSRBIG00000026280	SHQ1	76	59.226	Rhinopithecus_bieti
ENSPNYG00000003878	shq1	79	56.883	ENSRROG00000034126	SHQ1	77	61.435	Rhinopithecus_roxellana
ENSPNYG00000003878	shq1	68	54.567	ENSSBOG00000021038	SHQ1	74	53.933	Saimiri_boliviensis_boliviensis
ENSPNYG00000003878	shq1	77	57.595	ENSSHAG00000015077	SHQ1	77	60.045	Sarcophilus_harrisii
ENSPNYG00000003878	shq1	99	59.060	ENSSFOG00015016241	shq1	99	59.564	Scleropages_formosus
ENSPNYG00000003878	shq1	99	74.295	ENSSMAG00000016151	shq1	99	73.964	Scophthalmus_maximus
ENSPNYG00000003878	shq1	99	75.908	ENSSDUG00000011986	shq1	99	76.238	Seriola_dumerili
ENSPNYG00000003878	shq1	99	75.041	ENSSLDG00000013908	shq1	99	75.207	Seriola_lalandi_dorsalis
ENSPNYG00000003878	shq1	56	58.309	ENSSARG00000007119	SHQ1	77	50.452	Sorex_araneus
ENSPNYG00000003878	shq1	85	47.263	ENSSPUG00000011526	-	65	59.259	Sphenodon_punctatus
ENSPNYG00000003878	shq1	81	56.566	ENSSSCG00000011518	SHQ1	76	60.407	Sus_scrofa
ENSPNYG00000003878	shq1	68	62.619	ENSTGUG00000009933	SHQ1	76	61.883	Taeniopygia_guttata
ENSPNYG00000003878	shq1	98	66.164	ENSTRUG00000009446	shq1	99	66.330	Takifugu_rubripes
ENSPNYG00000003878	shq1	77	69.658	ENSTNIG00000007354	shq1	96	72.936	Tetraodon_nigroviridis
ENSPNYG00000003878	shq1	72	59.594	ENSTTRG00000005320	SHQ1	76	59.685	Tursiops_truncatus
ENSPNYG00000003878	shq1	93	50.260	ENSUMAG00000024031	SHQ1	74	60.047	Ursus_maritimus
ENSPNYG00000003878	shq1	69	49.885	ENSVPAG00000004880	SHQ1	59	60.635	Vicugna_pacos
ENSPNYG00000003878	shq1	74	58.114	ENSVVUG00000013906	SHQ1	76	59.551	Vulpes_vulpes
ENSPNYG00000003878	shq1	99	48.136	ENSXETG00000032215	shq1	99	48.377	Xenopus_tropicalis