EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000003942 (Gene tree)
Gene ID: 102198340
Gene Symbol: cherp
Alias: fc83d01|ik:tdsubc_2h12|tdsubc_2h12|wu:fc83d01|xx:tdsubc_2h12|zgc:55518
Full Name: calcium homeostasis endoplasmic reticulum protein
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 19909 bases
Position: chrJH419262.1:2034953-2054861
Accession: 102198340
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000005166	Surp	PF01805.20	1.1e-17	1	1
ENSPNYP00000005139	Surp	PF01805.20	4.5e-17	1	1
ENSPNYP00000005123	Surp	PF01805.20	4.6e-17	1	1
ENSPNYP00000005166	G-patch	PF01585.23	1.4e-10	1	1
ENSPNYP00000005139	G-patch	PF01585.23	1.5e-10	1	1
ENSPNYP00000005123	G-patch	PF01585.23	1.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000005253	-	3812	XM_005734240	ENSPNYP00000005123	922 (aa)	XP_005734297	UPI0003AFD936
ENSPNYT00000005300	-	2580	-	ENSPNYP00000005166	859 (aa)	-	-
ENSPNYT00000005269	-	3773	XM_005734242	ENSPNYP00000005139	909 (aa)	XP_005734299	UPI0003AFB6CA

Gene Model

Click here to download ENSPNYG00000003942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000003942's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000003942	cherp	79	67.023	ENSG00000085872	CHERP	99	65.595	Homo_sapiens
ENSPNYG00000003942	cherp	98	66.594	ENSAMEG00000010048	CHERP	99	65.798	Ailuropoda_melanoleuca
ENSPNYG00000003942	cherp	99	75.578	ENSACIG00000019242	cherp	99	76.744	Amphilophus_citrinellus
ENSPNYG00000003942	cherp	100	91.549	ENSAOCG00000017846	cherp	100	91.441	Amphiprion_ocellaris
ENSPNYG00000003942	cherp	100	91.757	ENSAPEG00000021128	cherp	100	91.866	Amphiprion_percula
ENSPNYG00000003942	cherp	100	89.838	ENSATEG00000006341	cherp	99	89.622	Anabas_testudineus
ENSPNYG00000003942	cherp	86	89.873	ENSAPLG00000010773	CHERP	88	81.720	Anas_platyrhynchos
ENSPNYG00000003942	cherp	51	66.599	ENSACAG00000011583	CHERP	99	68.313	Anolis_carolinensis
ENSPNYG00000003942	cherp	79	65.921	ENSANAG00000024284	CHERP	99	65.148	Aotus_nancymaae
ENSPNYG00000003942	cherp	100	99.349	ENSACLG00000020053	cherp	100	99.349	Astatotilapia_calliptera
ENSPNYG00000003942	cherp	79	74.635	ENSAMXG00000021637	cherp	94	71.855	Astyanax_mexicanus
ENSPNYG00000003942	cherp	99	65.250	ENSBTAG00000005289	CHERP	99	64.920	Bos_taurus
ENSPNYG00000003942	cherp	79	65.921	ENSCJAG00000040462	CHERP	99	65.148	Callithrix_jacchus
ENSPNYG00000003942	cherp	79	67.152	ENSCAFG00000015671	CHERP	99	65.775	Canis_familiaris
ENSPNYG00000003942	cherp	85	87.500	ENSCAFG00020009941	CHERP	99	65.222	Canis_lupus_dingo
ENSPNYG00000003942	cherp	87	80.851	ENSCHIG00000013765	CHERP	95	80.645	Capra_hircus
ENSPNYG00000003942	cherp	89	61.157	ENSCAPG00000000910	CHERP	68	66.359	Cavia_aperea
ENSPNYG00000003942	cherp	79	65.486	ENSCPOG00000019949	CHERP	99	64.793	Cavia_porcellus
ENSPNYG00000003942	cherp	79	66.053	ENSCCAG00000031534	CHERP	99	65.254	Cebus_capucinus
ENSPNYG00000003942	cherp	79	65.834	ENSCATG00000031409	CHERP	99	65.328	Cercocebus_atys
ENSPNYG00000003942	cherp	68	65.802	ENSCLAG00000005484	CHERP	93	65.119	Chinchilla_lanigera
ENSPNYG00000003942	cherp	79	67.156	ENSCSAG00000005740	CHERP	99	65.702	Chlorocebus_sabaeus
ENSPNYG00000003942	cherp	99	65.693	ENSCPBG00000014970	CHERP	89	76.093	Chrysemys_picta_bellii
ENSPNYG00000003942	cherp	86	39.146	ENSCING00000004814	-	54	76.923	Ciona_intestinalis
ENSPNYG00000003942	cherp	50	77.778	ENSCSAVG00000002455	-	51	73.958	Ciona_savignyi
ENSPNYG00000003942	cherp	79	67.557	ENSCANG00000032053	CHERP	99	65.595	Colobus_angolensis_palliatus
ENSPNYG00000003942	cherp	79	65.144	ENSCGRG00001023316	Cherp	99	65.126	Cricetulus_griseus_chok1gshd
ENSPNYG00000003942	cherp	78	66.355	ENSCGRG00000015901	Cherp	99	65.739	Cricetulus_griseus_crigri
ENSPNYG00000003942	cherp	80	85.000	ENSCSEG00000019700	cherp	100	84.673	Cynoglossus_semilaevis
ENSPNYG00000003942	cherp	75	83.528	ENSCVAG00000003622	cherp	97	80.785	Cyprinodon_variegatus
ENSPNYG00000003942	cherp	100	73.851	ENSDARG00000021812	cherp	100	79.767	Danio_rerio
ENSPNYG00000003942	cherp	99	60.246	ENSDORG00000027623	Cherp	90	81.720	Dipodomys_ordii
ENSPNYG00000003942	cherp	60	75.446	ENSETEG00000019543	CHERP	83	75.221	Echinops_telfairi
ENSPNYG00000003942	cherp	79	66.490	ENSEASG00005000428	CHERP	92	65.775	Equus_asinus_asinus
ENSPNYG00000003942	cherp	78	67.871	ENSECAG00000012713	CHERP	99	65.775	Equus_caballus
ENSPNYG00000003942	cherp	99	75.248	ENSELUG00000023026	cherp	98	75.359	Esox_lucius
ENSPNYG00000003942	cherp	79	65.365	ENSFCAG00000013172	CHERP	99	64.979	Felis_catus
ENSPNYG00000003942	cherp	79	67.742	ENSFALG00000013410	CHERP	77	81.720	Ficedula_albicollis
ENSPNYG00000003942	cherp	79	58.672	ENSFDAG00000015981	CHERP	100	57.599	Fukomys_damarensis
ENSPNYG00000003942	cherp	92	89.552	ENSFHEG00000009720	cherp	90	90.426	Fundulus_heteroclitus
ENSPNYG00000003942	cherp	98	79.648	ENSGMOG00000008654	cherp	99	79.626	Gadus_morhua
ENSPNYG00000003942	cherp	79	67.833	ENSGALG00000003824	CHERP	79	81.720	Gallus_gallus
ENSPNYG00000003942	cherp	99	84.449	ENSGACG00000002053	cherp	99	84.017	Gasterosteus_aculeatus
ENSPNYG00000003942	cherp	99	65.584	ENSGAGG00000014208	CHERP	89	75.802	Gopherus_agassizii
ENSPNYG00000003942	cherp	100	99.024	ENSHBUG00000007405	cherp	100	99.024	Haplochromis_burtoni
ENSPNYG00000003942	cherp	79	66.446	ENSHGLG00000002993	CHERP	99	66.238	Heterocephalus_glaber_female
ENSPNYG00000003942	cherp	79	81.319	ENSHCOG00000007691	cherp	100	79.701	Hippocampus_comes
ENSPNYG00000003942	cherp	79	77.304	ENSIPUG00000025008	cherp	100	72.126	Ictalurus_punctatus
ENSPNYG00000003942	cherp	78	67.707	ENSSTOG00000012089	CHERP	99	66.017	Ictidomys_tridecemlineatus
ENSPNYG00000003942	cherp	99	61.718	ENSJJAG00000017982	Cherp	81	66.045	Jaculus_jaculus
ENSPNYG00000003942	cherp	100	87.185	ENSKMAG00000009101	cherp	100	87.185	Kryptolebias_marmoratus
ENSPNYG00000003942	cherp	78	87.151	ENSLBEG00000007586	cherp	91	88.152	Labrus_bergylta
ENSPNYG00000003942	cherp	79	66.710	ENSLACG00000018221	CHERP	80	85.780	Latimeria_chalumnae
ENSPNYG00000003942	cherp	99	73.476	ENSLOCG00000003654	cherp	99	72.970	Lepisosteus_oculatus
ENSPNYG00000003942	cherp	79	66.265	ENSLAFG00000009096	CHERP	100	66.919	Loxodonta_africana
ENSPNYG00000003942	cherp	79	65.921	ENSMFAG00000033267	CHERP	99	65.397	Macaca_fascicularis
ENSPNYG00000003942	cherp	79	64.883	ENSMMUG00000012958	CHERP	82	65.526	Macaca_mulatta
ENSPNYG00000003942	cherp	79	65.921	ENSMNEG00000004125	CHERP	99	65.397	Macaca_nemestrina
ENSPNYG00000003942	cherp	74	82.418	ENSMLEG00000044337	CHERP	99	72.171	Mandrillus_leucophaeus
ENSPNYG00000003942	cherp	100	89.462	ENSMAMG00000022269	cherp	100	89.791	Mastacembelus_armatus
ENSPNYG00000003942	cherp	100	99.241	ENSMZEG00005018014	cherp	100	99.241	Maylandia_zebra
ENSPNYG00000003942	cherp	78	89.873	ENSMGAG00000005571	CHERP	82	81.720	Meleagris_gallopavo
ENSPNYG00000003942	cherp	79	65.183	ENSMAUG00000015856	Cherp	99	65.158	Mesocricetus_auratus
ENSPNYG00000003942	cherp	78	67.204	ENSMICG00000004577	CHERP	99	65.376	Microcebus_murinus
ENSPNYG00000003942	cherp	79	66.622	ENSMOCG00000014697	Cherp	99	65.815	Microtus_ochrogaster
ENSPNYG00000003942	cherp	99	87.982	ENSMMOG00000008525	cherp	97	87.321	Mola_mola
ENSPNYG00000003942	cherp	100	88.889	ENSMALG00000020688	cherp	100	89.644	Monopterus_albus
ENSPNYG00000003942	cherp	79	65.744	MGP_CAROLIEiJ_G0031220	Cherp	99	65.503	Mus_caroli
ENSPNYG00000003942	cherp	99	64.263	ENSMUSG00000052488	Cherp	99	64.059	Mus_musculus
ENSPNYG00000003942	cherp	79	66.223	MGP_PahariEiJ_G0021685	Cherp	99	66.418	Mus_pahari
ENSPNYG00000003942	cherp	79	65.918	MGP_SPRETEiJ_G0032341	Cherp	99	65.642	Mus_spretus
ENSPNYG00000003942	cherp	79	66.446	ENSMPUG00000016023	CHERP	77	65.957	Mustela_putorius_furo
ENSPNYG00000003942	cherp	99	60.976	ENSMLUG00000013881	CHERP	99	60.341	Myotis_lucifugus
ENSPNYG00000003942	cherp	79	64.668	ENSNGAG00000023323	Cherp	99	65.300	Nannospalax_galili
ENSPNYG00000003942	cherp	100	92.516	ENSNBRG00000001914	cherp	100	92.516	Neolamprologus_brichardi
ENSPNYG00000003942	cherp	79	67.156	ENSNLEG00000005536	CHERP	99	65.953	Nomascus_leucogenys
ENSPNYG00000003942	cherp	70	82.418	ENSMEUG00000010840	CHERP	91	76.451	Notamacropus_eugenii
ENSPNYG00000003942	cherp	78	67.388	ENSODEG00000001528	CHERP	81	66.171	Octodon_degus
ENSPNYG00000003942	cherp	100	98.482	ENSONIG00000007686	cherp	100	98.482	Oreochromis_niloticus
ENSPNYG00000003942	cherp	99	85.226	ENSORLG00000000138	cherp	100	83.846	Oryzias_latipes
ENSPNYG00000003942	cherp	99	85.006	ENSORLG00020013142	cherp	100	83.626	Oryzias_latipes_hni
ENSPNYG00000003942	cherp	99	84.785	ENSORLG00015008911	cherp	100	83.407	Oryzias_latipes_hsok
ENSPNYG00000003942	cherp	99	85.635	ENSOMEG00000016947	cherp	99	84.530	Oryzias_melastigma
ENSPNYG00000003942	cherp	79	66.138	ENSOGAG00000005834	CHERP	99	64.850	Otolemur_garnettii
ENSPNYG00000003942	cherp	79	58.589	ENSOARG00000018876	CHERP	98	59.271	Ovis_aries
ENSPNYG00000003942	cherp	79	65.703	ENSPPAG00000029195	CHERP	99	64.974	Pan_paniscus
ENSPNYG00000003942	cherp	79	65.365	ENSPPRG00000003275	CHERP	99	64.979	Panthera_pardus
ENSPNYG00000003942	cherp	99	56.919	ENSPTIG00000019778	CHERP	99	53.088	Panthera_tigris_altaica
ENSPNYG00000003942	cherp	79	66.800	ENSPTRG00000010647	CHERP	99	65.525	Pan_troglodytes
ENSPNYG00000003942	cherp	79	65.921	ENSPANG00000011698	CHERP	99	65.397	Papio_anubis
ENSPNYG00000003942	cherp	78	67.353	ENSPKIG00000000423	cherp	99	67.427	Paramormyrops_kingsleyae
ENSPNYG00000003942	cherp	98	66.377	ENSPSIG00000011974	CHERP	100	64.502	Pelodiscus_sinensis
ENSPNYG00000003942	cherp	98	70.645	ENSPMGG00000023606	cherp	99	64.309	Periophthalmus_magnuspinnatus
ENSPNYG00000003942	cherp	79	61.818	ENSPEMG00000011238	Cherp	99	64.958	Peromyscus_maniculatus_bairdii
ENSPNYG00000003942	cherp	80	55.627	ENSPCIG00000019615	CHERP	95	65.717	Phascolarctos_cinereus
ENSPNYG00000003942	cherp	99	85.161	ENSPFOG00000016899	cherp	99	85.050	Poecilia_formosa
ENSPNYG00000003942	cherp	85	83.548	ENSPMEG00000002214	cherp	98	70.079	Poecilia_mexicana
ENSPNYG00000003942	cherp	99	85.809	ENSPREG00000020774	cherp	99	85.698	Poecilia_reticulata
ENSPNYG00000003942	cherp	79	64.912	ENSPPYG00000009691	CHERP	99	64.078	Pongo_abelii
ENSPNYG00000003942	cherp	89	79.787	ENSPCAG00000001337	CHERP	90	79.570	Procavia_capensis
ENSPNYG00000003942	cherp	89	79.787	ENSPVAG00000004320	CHERP	90	79.570	Pteropus_vampyrus
ENSPNYG00000003942	cherp	79	74.639	ENSPNAG00000017179	cherp	100	71.762	Pygocentrus_nattereri
ENSPNYG00000003942	cherp	79	65.744	ENSRNOG00000012323	Cherp	99	65.503	Rattus_norvegicus
ENSPNYG00000003942	cherp	79	67.156	ENSRBIG00000038621	CHERP	99	65.773	Rhinopithecus_bieti
ENSPNYG00000003942	cherp	79	65.921	ENSRROG00000040770	CHERP	99	65.397	Rhinopithecus_roxellana
ENSPNYG00000003942	cherp	99	60.741	ENSSBOG00000014492	CHERP	99	65.079	Saimiri_boliviensis_boliviensis
ENSPNYG00000003942	cherp	79	54.616	ENSSHAG00000010752	CHERP	99	64.783	Sarcophilus_harrisii
ENSPNYG00000003942	cherp	63	83.951	ENSSFOG00015008022	cherp	88	83.951	Scleropages_formosus
ENSPNYG00000003942	cherp	100	87.003	ENSSMAG00000005362	cherp	100	87.648	Scophthalmus_maximus
ENSPNYG00000003942	cherp	100	91.392	ENSSDUG00000019712	cherp	100	91.498	Seriola_dumerili
ENSPNYG00000003942	cherp	100	91.961	ENSSLDG00000012659	cherp	100	92.069	Seriola_lalandi_dorsalis
ENSPNYG00000003942	cherp	99	66.958	ENSSPUG00000008901	CHERP	99	66.557	Sphenodon_punctatus
ENSPNYG00000003942	cherp	100	91.874	ENSSPAG00000010681	cherp	100	92.418	Stegastes_partitus
ENSPNYG00000003942	cherp	79	66.490	ENSSSCG00000013860	CHERP	99	65.989	Sus_scrofa
ENSPNYG00000003942	cherp	79	67.517	ENSTGUG00000000680	CHERP	99	65.912	Taeniopygia_guttata
ENSPNYG00000003942	cherp	100	80.876	ENSTRUG00000007429	cherp	100	82.692	Takifugu_rubripes
ENSPNYG00000003942	cherp	99	81.596	ENSTNIG00000003363	cherp	99	82.889	Tetraodon_nigroviridis
ENSPNYG00000003942	cherp	68	66.406	ENSTTRG00000015006	CHERP	89	68.462	Tursiops_truncatus
ENSPNYG00000003942	cherp	99	61.266	ENSUAMG00000017295	CHERP	80	64.658	Ursus_americanus
ENSPNYG00000003942	cherp	99	61.024	ENSVVUG00000016546	CHERP	99	64.947	Vulpes_vulpes