EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000003979 (Gene tree)
Gene ID: 102214616
Gene Symbol: pdcd11
Alias: cb680|im:7148359|sb:cb680|wu:fc68c10
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 16494 bases
Position: chrJH419270.1:1338946-1355439
Accession: 102214616
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000005117	Suf	PF05843.14	1.3e-09	1	1
ENSPNYP00000005117	S1	PF00575.23	3.7e-63	1	4
ENSPNYP00000005117	S1	PF00575.23	3.7e-63	2	4
ENSPNYP00000005117	S1	PF00575.23	3.7e-63	3	4
ENSPNYP00000005117	S1	PF00575.23	3.7e-63	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000005247	-	8011	XM_005735771	ENSPNYP00000005117	1805 (aa)	XP_005735828	UPI0003AF8659

Gene Model

Click here to download ENSPNYG00000003979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000003979's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000003979	pdcd11	99	44.627	ENSG00000148843	PDCD11	95	60.212	Homo_sapiens
ENSPNYG00000003979	pdcd11	99	79.736	ENSAPOG00000015629	pdcd11	99	79.658	Acanthochromis_polyacanthus
ENSPNYG00000003979	pdcd11	99	44.521	ENSAMEG00000017935	PDCD11	95	61.257	Ailuropoda_melanoleuca
ENSPNYG00000003979	pdcd11	51	76.464	ENSACIG00000006458	-	99	76.464	Amphilophus_citrinellus
ENSPNYG00000003979	pdcd11	99	80.265	ENSAOCG00000015287	pdcd11	99	79.768	Amphiprion_ocellaris
ENSPNYG00000003979	pdcd11	56	76.733	ENSAPEG00000020240	pdcd11	99	76.733	Amphiprion_percula
ENSPNYG00000003979	pdcd11	100	79.857	ENSATEG00000021043	pdcd11	100	79.857	Anabas_testudineus
ENSPNYG00000003979	pdcd11	99	45.216	ENSACAG00000004796	PDCD11	99	45.325	Anolis_carolinensis
ENSPNYG00000003979	pdcd11	99	44.087	ENSANAG00000034576	PDCD11	76	41.509	Aotus_nancymaae
ENSPNYG00000003979	pdcd11	97	91.874	ENSACLG00000018236	pdcd11	100	93.750	Astatotilapia_calliptera
ENSPNYG00000003979	pdcd11	99	50.143	ENSAMXG00000005458	pdcd11	97	53.280	Astyanax_mexicanus
ENSPNYG00000003979	pdcd11	99	44.673	ENSBTAG00000009715	PDCD11	96	60.950	Bos_taurus
ENSPNYG00000003979	pdcd11	99	43.875	ENSCJAG00000018257	PDCD11	76	41.579	Callithrix_jacchus
ENSPNYG00000003979	pdcd11	99	44.291	ENSCAFG00000010411	PDCD11	96	61.111	Canis_familiaris
ENSPNYG00000003979	pdcd11	99	44.828	ENSCAFG00020010369	PDCD11	96	61.111	Canis_lupus_dingo
ENSPNYG00000003979	pdcd11	99	44.474	ENSCHIG00000025218	PDCD11	95	60.963	Capra_hircus
ENSPNYG00000003979	pdcd11	95	43.729	ENSTSYG00000033423	PDCD11	99	43.288	Carlito_syrichta
ENSPNYG00000003979	pdcd11	92	40.769	ENSCAPG00000005386	PDCD11	99	40.420	Cavia_aperea
ENSPNYG00000003979	pdcd11	99	43.529	ENSCPOG00000010957	PDCD11	99	42.889	Cavia_porcellus
ENSPNYG00000003979	pdcd11	99	43.717	ENSCCAG00000018950	PDCD11	76	41.300	Cebus_capucinus
ENSPNYG00000003979	pdcd11	99	44.497	ENSCATG00000044331	PDCD11	96	59.840	Cercocebus_atys
ENSPNYG00000003979	pdcd11	99	43.720	ENSCLAG00000001029	PDCD11	99	43.469	Chinchilla_lanigera
ENSPNYG00000003979	pdcd11	99	44.492	ENSCSAG00000005346	PDCD11	96	59.840	Chlorocebus_sabaeus
ENSPNYG00000003979	pdcd11	71	68.992	ENSCHOG00000004796	PDCD11	75	68.992	Choloepus_hoffmanni
ENSPNYG00000003979	pdcd11	92	60.623	ENSCPBG00000024487	PDCD11	99	61.207	Chrysemys_picta_bellii
ENSPNYG00000003979	pdcd11	99	44.280	ENSCANG00000043300	PDCD11	96	60.160	Colobus_angolensis_palliatus
ENSPNYG00000003979	pdcd11	99	44.184	ENSCGRG00001006458	Pdcd11	99	43.780	Cricetulus_griseus_chok1gshd
ENSPNYG00000003979	pdcd11	99	44.053	ENSCGRG00000003583	Pdcd11	99	43.650	Cricetulus_griseus_crigri
ENSPNYG00000003979	pdcd11	97	72.222	ENSCSEG00000010739	pdcd11	99	72.222	Cynoglossus_semilaevis
ENSPNYG00000003979	pdcd11	95	75.081	ENSCVAG00000018903	pdcd11	99	74.593	Cyprinodon_variegatus
ENSPNYG00000003979	pdcd11	99	44.415	ENSDNOG00000013838	PDCD11	94	62.108	Dasypus_novemcinctus
ENSPNYG00000003979	pdcd11	99	44.097	ENSDORG00000010420	Pdcd11	99	44.606	Dipodomys_ordii
ENSPNYG00000003979	pdcd11	53	31.476	FBgn0039182	CG5728	70	32.295	Drosophila_melanogaster
ENSPNYG00000003979	pdcd11	90	52.941	ENSETEG00000000813	PDCD11	97	46.226	Echinops_telfairi
ENSPNYG00000003979	pdcd11	72	49.175	ENSEBUG00000002358	-	87	51.812	Eptatretus_burgeri
ENSPNYG00000003979	pdcd11	95	44.883	ENSEASG00005015159	PDCD11	74	42.027	Equus_asinus_asinus
ENSPNYG00000003979	pdcd11	99	44.615	ENSECAG00000020507	PDCD11	75	41.638	Equus_caballus
ENSPNYG00000003979	pdcd11	89	44.565	ENSEEUG00000009245	PDCD11	65	44.565	Erinaceus_europaeus
ENSPNYG00000003979	pdcd11	99	60.274	ENSELUG00000004211	pdcd11	99	60.209	Esox_lucius
ENSPNYG00000003979	pdcd11	99	44.503	ENSFCAG00000002384	PDCD11	95	61.111	Felis_catus
ENSPNYG00000003979	pdcd11	99	45.065	ENSFALG00000008775	PDCD11	99	44.927	Ficedula_albicollis
ENSPNYG00000003979	pdcd11	99	43.923	ENSFDAG00000009532	PDCD11	99	43.032	Fukomys_damarensis
ENSPNYG00000003979	pdcd11	90	89.701	ENSFHEG00000022997	pdcd11	95	89.701	Fundulus_heteroclitus
ENSPNYG00000003979	pdcd11	93	62.944	ENSGMOG00000004186	pdcd11	94	62.817	Gadus_morhua
ENSPNYG00000003979	pdcd11	77	42.687	ENSGALG00000008265	PDCD11	97	42.687	Gallus_gallus
ENSPNYG00000003979	pdcd11	96	74.248	ENSGAFG00000012806	pdcd11	99	73.034	Gambusia_affinis
ENSPNYG00000003979	pdcd11	99	72.594	ENSGACG00000018233	pdcd11	97	83.770	Gasterosteus_aculeatus
ENSPNYG00000003979	pdcd11	95	47.079	ENSGAGG00000024314	PDCD11	99	46.538	Gopherus_agassizii
ENSPNYG00000003979	pdcd11	99	44.703	ENSGGOG00000011621	PDCD11	96	59.840	Gorilla_gorilla
ENSPNYG00000003979	pdcd11	100	99.280	ENSHBUG00000020226	pdcd11	100	99.280	Haplochromis_burtoni
ENSPNYG00000003979	pdcd11	99	43.853	ENSHGLG00000001462	PDCD11	99	43.427	Heterocephalus_glaber_female
ENSPNYG00000003979	pdcd11	99	43.268	ENSHGLG00100018779	PDCD11	99	42.789	Heterocephalus_glaber_male
ENSPNYG00000003979	pdcd11	99	70.579	ENSHCOG00000016006	pdcd11	99	70.485	Hippocampus_comes
ENSPNYG00000003979	pdcd11	63	53.327	ENSIPUG00000015102	pdcd11	99	55.195	Ictalurus_punctatus
ENSPNYG00000003979	pdcd11	99	43.977	ENSSTOG00000014553	PDCD11	99	44.266	Ictidomys_tridecemlineatus
ENSPNYG00000003979	pdcd11	99	45.348	ENSJJAG00000015523	Pdcd11	99	45.294	Jaculus_jaculus
ENSPNYG00000003979	pdcd11	51	70.607	ENSKMAG00000021182	pdcd11	99	70.607	Kryptolebias_marmoratus
ENSPNYG00000003979	pdcd11	99	55.702	ENSLOCG00000011818	pdcd11	99	55.592	Lepisosteus_oculatus
ENSPNYG00000003979	pdcd11	99	44.909	ENSLAFG00000008398	PDCD11	99	44.755	Loxodonta_africana
ENSPNYG00000003979	pdcd11	99	44.227	ENSMFAG00000044058	PDCD11	96	59.840	Macaca_fascicularis
ENSPNYG00000003979	pdcd11	99	44.174	ENSMMUG00000007058	PDCD11	96	59.840	Macaca_mulatta
ENSPNYG00000003979	pdcd11	99	44.333	ENSMNEG00000040726	PDCD11	96	59.574	Macaca_nemestrina
ENSPNYG00000003979	pdcd11	99	78.997	ENSMAMG00000009572	pdcd11	99	78.942	Mastacembelus_armatus
ENSPNYG00000003979	pdcd11	100	99.225	ENSMZEG00005008949	pdcd11	100	99.225	Maylandia_zebra
ENSPNYG00000003979	pdcd11	99	44.480	ENSMGAG00000010482	PDCD11	96	58.839	Meleagris_gallopavo
ENSPNYG00000003979	pdcd11	91	47.139	ENSMAUG00000014924	Pdcd11	94	60.000	Mesocricetus_auratus
ENSPNYG00000003979	pdcd11	99	44.681	ENSMICG00000012421	PDCD11	76	42.068	Microcebus_murinus
ENSPNYG00000003979	pdcd11	99	44.302	ENSMOCG00000021792	Pdcd11	95	60.106	Microtus_ochrogaster
ENSPNYG00000003979	pdcd11	99	62.527	ENSMMOG00000007572	pdcd11	97	70.330	Mola_mola
ENSPNYG00000003979	pdcd11	93	50.607	ENSMODG00000011077	PDCD11	90	61.067	Monodelphis_domestica
ENSPNYG00000003979	pdcd11	99	64.865	ENSMALG00000003859	pdcd11	99	73.102	Monopterus_albus
ENSPNYG00000003979	pdcd11	99	44.212	MGP_CAROLIEiJ_G0023050	Pdcd11	99	43.730	Mus_caroli
ENSPNYG00000003979	pdcd11	99	43.870	ENSMUSG00000025047	Pdcd11	99	43.970	Mus_musculus
ENSPNYG00000003979	pdcd11	99	44.148	MGP_SPRETEiJ_G0023971	Pdcd11	99	44.177	Mus_spretus
ENSPNYG00000003979	pdcd11	99	44.562	ENSMPUG00000016829	PDCD11	95	61.968	Mustela_putorius_furo
ENSPNYG00000003979	pdcd11	99	44.233	ENSMLUG00000004997	PDCD11	96	60.582	Myotis_lucifugus
ENSPNYG00000003979	pdcd11	99	43.985	ENSNGAG00000018143	Pdcd11	99	43.552	Nannospalax_galili
ENSPNYG00000003979	pdcd11	85	96.166	ENSNBRG00000021596	pdcd11	99	89.539	Neolamprologus_brichardi
ENSPNYG00000003979	pdcd11	99	42.766	ENSNLEG00000026700	PDCD11	95	59.309	Nomascus_leucogenys
ENSPNYG00000003979	pdcd11	70	67.111	ENSMEUG00000013719	-	61	67.111	Notamacropus_eugenii
ENSPNYG00000003979	pdcd11	99	45.352	ENSOPRG00000010593	PDCD11	93	60.000	Ochotona_princeps
ENSPNYG00000003979	pdcd11	99	43.663	ENSODEG00000008079	PDCD11	99	43.397	Octodon_degus
ENSPNYG00000003979	pdcd11	100	97.010	ENSONIG00000018835	pdcd11	100	97.010	Oreochromis_niloticus
ENSPNYG00000003979	pdcd11	99	43.018	ENSOANG00000001636	-	99	43.018	Ornithorhynchus_anatinus
ENSPNYG00000003979	pdcd11	99	44.286	ENSOCUG00000006312	PDCD11	99	43.968	Oryctolagus_cuniculus
ENSPNYG00000003979	pdcd11	99	74.284	ENSORLG00020003642	pdcd11	99	74.174	Oryzias_latipes_hni
ENSPNYG00000003979	pdcd11	99	74.601	ENSORLG00015001618	pdcd11	99	74.160	Oryzias_latipes_hsok
ENSPNYG00000003979	pdcd11	73	74.533	ENSOMEG00000010904	pdcd11	98	74.087	Oryzias_melastigma
ENSPNYG00000003979	pdcd11	99	44.321	ENSOARG00000003719	PDCD11	95	60.477	Ovis_aries
ENSPNYG00000003979	pdcd11	99	44.174	ENSPPAG00000024593	PDCD11	95	60.106	Pan_paniscus
ENSPNYG00000003979	pdcd11	99	44.767	ENSPPRG00000015133	PDCD11	95	61.111	Panthera_pardus
ENSPNYG00000003979	pdcd11	99	44.662	ENSPTIG00000011433	PDCD11	95	61.170	Panthera_tigris_altaica
ENSPNYG00000003979	pdcd11	99	44.703	ENSPTRG00000002911	PDCD11	95	60.106	Pan_troglodytes
ENSPNYG00000003979	pdcd11	99	44.544	ENSPANG00000020959	PDCD11	96	59.309	Papio_anubis
ENSPNYG00000003979	pdcd11	99	55.845	ENSPKIG00000000973	pdcd11	99	55.758	Paramormyrops_kingsleyae
ENSPNYG00000003979	pdcd11	78	43.590	ENSPSIG00000005102	PDCD11	93	44.099	Pelodiscus_sinensis
ENSPNYG00000003979	pdcd11	68	82.911	ENSPMGG00000007289	pdcd11	93	81.481	Periophthalmus_magnuspinnatus
ENSPNYG00000003979	pdcd11	99	44.097	ENSPEMG00000010315	Pdcd11	96	60.000	Peromyscus_maniculatus_bairdii
ENSPNYG00000003979	pdcd11	99	43.240	ENSPCIG00000001118	PDCD11	95	59.249	Phascolarctos_cinereus
ENSPNYG00000003979	pdcd11	99	72.737	ENSPFOG00000006012	pdcd11	99	72.893	Poecilia_formosa
ENSPNYG00000003979	pdcd11	97	75.194	ENSPLAG00000014494	pdcd11	99	74.845	Poecilia_latipinna
ENSPNYG00000003979	pdcd11	95	72.527	ENSPMEG00000018177	pdcd11	99	72.527	Poecilia_mexicana
ENSPNYG00000003979	pdcd11	99	72.277	ENSPREG00000000475	pdcd11	99	72.363	Poecilia_reticulata
ENSPNYG00000003979	pdcd11	99	41.060	ENSPPYG00000002621	PDCD11	95	59.309	Pongo_abelii
ENSPNYG00000003979	pdcd11	99	40.549	ENSPCOG00000023327	PDCD11	94	61.960	Propithecus_coquereli
ENSPNYG00000003979	pdcd11	99	43.743	ENSPVAG00000004176	PDCD11	75	40.979	Pteropus_vampyrus
ENSPNYG00000003979	pdcd11	95	56.659	ENSPNAG00000017225	pdcd11	99	56.716	Pygocentrus_nattereri
ENSPNYG00000003979	pdcd11	99	43.660	ENSRNOG00000020304	Pdcd11	96	60.800	Rattus_norvegicus
ENSPNYG00000003979	pdcd11	99	44.333	ENSRBIG00000011889	PDCD11	96	59.893	Rhinopithecus_bieti
ENSPNYG00000003979	pdcd11	99	44.333	ENSRROG00000030483	PDCD11	96	60.160	Rhinopithecus_roxellana
ENSPNYG00000003979	pdcd11	95	33.918	YMR229C	-	77	33.918	Saccharomyces_cerevisiae
ENSPNYG00000003979	pdcd11	99	37.422	ENSSBOG00000030308	PDCD11	74	33.058	Saimiri_boliviensis_boliviensis
ENSPNYG00000003979	pdcd11	99	42.690	ENSSHAG00000018258	PDCD11	95	57.373	Sarcophilus_harrisii
ENSPNYG00000003979	pdcd11	99	56.354	ENSSFOG00015003881	pdcd11	99	56.115	Scleropages_formosus
ENSPNYG00000003979	pdcd11	99	78.041	ENSSMAG00000006612	pdcd11	99	78.158	Scophthalmus_maximus
ENSPNYG00000003979	pdcd11	97	71.811	ENSSDUG00000021302	pdcd11	99	74.046	Seriola_dumerili
ENSPNYG00000003979	pdcd11	50	78.108	ENSSLDG00000010228	pdcd11	99	78.658	Seriola_lalandi_dorsalis
ENSPNYG00000003979	pdcd11	76	67.347	ENSSARG00000002540	PDCD11	63	67.347	Sorex_araneus
ENSPNYG00000003979	pdcd11	97	78.876	ENSSPAG00000017558	pdcd11	100	78.852	Stegastes_partitus
ENSPNYG00000003979	pdcd11	99	44.662	ENSSSCG00000010599	PDCD11	99	44.833	Sus_scrofa
ENSPNYG00000003979	pdcd11	71	70.164	ENSTRUG00000014291	pdcd11	100	70.164	Takifugu_rubripes
ENSPNYG00000003979	pdcd11	100	70.134	ENSTNIG00000012085	pdcd11	100	70.188	Tetraodon_nigroviridis
ENSPNYG00000003979	pdcd11	97	61.272	ENSTBEG00000001893	PDCD11	94	61.272	Tupaia_belangeri
ENSPNYG00000003979	pdcd11	99	41.623	ENSTTRG00000003356	PDCD11	95	56.764	Tursiops_truncatus
ENSPNYG00000003979	pdcd11	99	44.355	ENSUAMG00000018015	PDCD11	95	61.478	Ursus_americanus
ENSPNYG00000003979	pdcd11	99	43.488	ENSUMAG00000023567	PDCD11	95	61.478	Ursus_maritimus
ENSPNYG00000003979	pdcd11	64	48.889	ENSVPAG00000007405	PDCD11	72	48.889	Vicugna_pacos
ENSPNYG00000003979	pdcd11	99	44.238	ENSVVUG00000004457	PDCD11	96	61.111	Vulpes_vulpes
ENSPNYG00000003979	pdcd11	99	44.108	ENSXETG00000009482	pdcd11	99	43.790	Xenopus_tropicalis
ENSPNYG00000003979	pdcd11	99	61.182	ENSXCOG00000012420	pdcd11	99	61.246	Xiphophorus_couchianus
ENSPNYG00000003979	pdcd11	99	73.249	ENSXMAG00000004638	pdcd11	99	73.458	Xiphophorus_maculatus