EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000003986 (Gene tree)
Gene ID: 102213209
Gene Symbol: -
Alias: -
Full Name: probable ATP-dependent RNA helicase ddx6
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 8496 bases
Position: chrJH419298.1:1219354-1227849
Accession: 102213209
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000005167	DEAD	PF00270.29	1.7e-42	1	1
ENSPNYP00000005145	DEAD	PF00270.29	2e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000005301	-	1362	-	ENSPNYP00000005167	453 (aa)	-	-
ENSPNYT00000005275	-	3862	XM_005739740	ENSPNYP00000005145	487 (aa)	XP_005739797	UPI00032A1403

Gene Model

Click here to download ENSPNYG00000003986's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000003986's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000003986	-	77	32.283	ENSPNYG00000020669	ddx47	78	32.283
ENSPNYG00000003986	-	66	31.915	ENSPNYG00000016437	ddx18	50	31.915
ENSPNYG00000003986	-	81	35.840	ENSPNYG00000016438	-	93	35.840
ENSPNYG00000003986	-	76	31.343	ENSPNYG00000002452	-	58	30.310
ENSPNYG00000003986	-	76	31.818	ENSPNYG00000012338	-	63	31.818
ENSPNYG00000003986	-	71	33.903	ENSPNYG00000009064	ddx43	50	33.903
ENSPNYG00000003986	-	73	34.218	ENSPNYG00000021160	zgc:193690	84	34.218
ENSPNYG00000003986	-	76	30.105	ENSPNYG00000017510	DDX5	57	30.685
ENSPNYG00000003986	-	78	30.597	ENSPNYG00000022212	ddx4	68	30.597
ENSPNYG00000003986	-	76	39.247	ENSPNYG00000009758	eif4a1b	92	39.247
ENSPNYG00000003986	-	67	45.098	ENSPNYG00000013839	ddx1	52	45.098
ENSPNYG00000003986	-	97	79.839	ENSPNYG00000008538	ddx6	99	82.268
ENSPNYG00000003986	-	79	34.171	ENSPNYG00000014433	ddx20	50	34.171
ENSPNYG00000003986	-	68	31.180	ENSPNYG00000003669	ddx55	60	31.180
ENSPNYG00000003986	-	99	81.503	ENSPNYG00000015045	ddx61	99	81.503
ENSPNYG00000003986	-	75	30.239	ENSPNYG00000000212	DDX41	60	30.239
ENSPNYG00000003986	-	76	31.643	ENSPNYG00000021038	ddx23	54	31.643
ENSPNYG00000003986	-	72	36.813	ENSPNYG00000006610	ddx19	79	36.813
ENSPNYG00000003986	-	77	37.302	ENSPNYG00000016865	eif4a3	92	37.302
ENSPNYG00000003986	-	72	31.944	ENSPNYG00000019669	-	57	31.944
ENSPNYG00000003986	-	76	32.021	ENSPNYG00000016672	ddx49	84	31.486
ENSPNYG00000003986	-	81	36.341	ENSPNYG00000001498	DDX39A	93	36.341
ENSPNYG00000003986	-	79	32.737	ENSPNYG00000010382	ddx39b	94	33.092
ENSPNYG00000003986	-	72	31.667	ENSPNYG00000005694	si:dkey-156n14.5	56	31.452
ENSPNYG00000003986	-	76	30.263	ENSPNYG00000019810	ddx59	59	30.263
ENSPNYG00000003986	-	76	40.054	ENSPNYG00000001780	eif4a2	90	40.054

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000003986	-	98	87.657	ENSAPOG00000014829	ddx61	98	87.657	Acanthochromis_polyacanthus
ENSPNYG00000003986	-	77	97.067	ENSAPOG00000023627	-	95	97.067	Acanthochromis_polyacanthus
ENSPNYG00000003986	-	100	98.896	ENSACIG00000018355	-	100	98.896	Amphilophus_citrinellus
ENSPNYG00000003986	-	98	88.703	ENSAOCG00000007627	ddx61	98	88.703	Amphiprion_ocellaris
ENSPNYG00000003986	-	100	96.524	ENSAOCG00000006269	-	100	96.524	Amphiprion_ocellaris
ENSPNYG00000003986	-	100	96.524	ENSAPEG00000021368	-	100	96.524	Amphiprion_percula
ENSPNYG00000003986	-	100	96.524	ENSAPEG00000020642	-	100	96.524	Amphiprion_percula
ENSPNYG00000003986	-	98	88.703	ENSAPEG00000007293	ddx61	98	88.703	Amphiprion_percula
ENSPNYG00000003986	-	100	95.910	ENSATEG00000005424	-	100	95.910	Anabas_testudineus
ENSPNYG00000003986	-	97	87.738	ENSATEG00000011302	ddx61	99	87.288	Anabas_testudineus
ENSPNYG00000003986	-	100	100.000	ENSACLG00000003260	-	100	100.000	Astatotilapia_calliptera
ENSPNYG00000003986	-	99	87.552	ENSACLG00000027620	ddx61	99	87.552	Astatotilapia_calliptera
ENSPNYG00000003986	-	97	87.815	ENSAMXG00000032542	ddx61	99	86.680	Astyanax_mexicanus
ENSPNYG00000003986	-	99	88.454	ENSAMXG00000033980	-	98	88.454	Astyanax_mexicanus
ENSPNYG00000003986	-	100	94.274	ENSCSEG00000009893	-	100	94.274	Cynoglossus_semilaevis
ENSPNYG00000003986	-	100	92.638	ENSCVAG00000011006	-	100	92.638	Cyprinodon_variegatus
ENSPNYG00000003986	-	97	87.076	ENSDARG00000018425	ddx61	98	87.076	Danio_rerio
ENSPNYG00000003986	-	99	89.775	ENSELUG00000022538	-	99	89.775	Esox_lucius
ENSPNYG00000003986	-	99	89.004	ENSELUG00000020545	ddx61	99	89.004	Esox_lucius
ENSPNYG00000003986	-	100	93.252	ENSFHEG00000015487	-	100	93.252	Fundulus_heteroclitus
ENSPNYG00000003986	-	71	87.462	ENSGMOG00000003561	-	100	88.146	Gadus_morhua
ENSPNYG00000003986	-	97	87.841	ENSGMOG00000013762	ddx61	99	87.526	Gadus_morhua
ENSPNYG00000003986	-	100	92.449	ENSGAFG00000015865	-	100	92.449	Gambusia_affinis
ENSPNYG00000003986	-	99	94.813	ENSGACG00000002413	-	99	94.813	Gasterosteus_aculeatus
ENSPNYG00000003986	-	99	86.420	ENSGACG00000003401	ddx61	100	86.420	Gasterosteus_aculeatus
ENSPNYG00000003986	-	100	100.000	ENSHBUG00000017033	-	100	100.000	Haplochromis_burtoni
ENSPNYG00000003986	-	99	87.759	ENSHBUG00000017832	ddx61	99	87.759	Haplochromis_burtoni
ENSPNYG00000003986	-	100	90.593	ENSHCOG00000012238	-	100	90.593	Hippocampus_comes
ENSPNYG00000003986	-	97	85.169	ENSHCOG00000008184	ddx61	97	85.169	Hippocampus_comes
ENSPNYG00000003986	-	97	89.641	ENSIPUG00000008367	-	98	89.263	Ictalurus_punctatus
ENSPNYG00000003986	-	96	86.325	ENSIPUG00000012823	DDX6	99	85.031	Ictalurus_punctatus
ENSPNYG00000003986	-	100	95.483	ENSKMAG00000007213	-	100	95.483	Kryptolebias_marmoratus
ENSPNYG00000003986	-	97	88.397	ENSLBEG00000001740	ddx61	98	88.397	Labrus_bergylta
ENSPNYG00000003986	-	100	93.750	ENSLBEG00000016890	-	100	93.750	Labrus_bergylta
ENSPNYG00000003986	-	98	84.232	ENSLACG00000015214	ddx61	100	84.232	Latimeria_chalumnae
ENSPNYG00000003986	-	96	52.632	ENSLOCG00000004352	ddx61	94	53.318	Lepisosteus_oculatus
ENSPNYG00000003986	-	99	87.010	ENSMAMG00000005321	ddx61	99	87.010	Mastacembelus_armatus
ENSPNYG00000003986	-	100	95.918	ENSMAMG00000005559	-	100	95.918	Mastacembelus_armatus
ENSPNYG00000003986	-	99	87.759	ENSMZEG00005003556	ddx61	99	87.759	Maylandia_zebra
ENSPNYG00000003986	-	100	100.000	ENSMZEG00005026268	-	100	100.000	Maylandia_zebra
ENSPNYG00000003986	-	72	77.054	ENSMMOG00000008825	-	92	77.054	Mola_mola
ENSPNYG00000003986	-	100	85.481	ENSMMOG00000013694	-	100	85.481	Mola_mola
ENSPNYG00000003986	-	96	86.994	ENSMMOG00000007415	ddx61	97	86.994	Mola_mola
ENSPNYG00000003986	-	100	94.070	ENSMALG00000013817	-	100	94.070	Monopterus_albus
ENSPNYG00000003986	-	97	82.472	ENSMALG00000013776	ddx61	96	82.472	Monopterus_albus
ENSPNYG00000003986	-	100	99.558	ENSNBRG00000015075	-	100	99.558	Neolamprologus_brichardi
ENSPNYG00000003986	-	98	87.162	ENSNBRG00000015800	ddx61	99	87.162	Neolamprologus_brichardi
ENSPNYG00000003986	-	98	87.866	ENSONIG00000011418	ddx61	99	87.866	Oreochromis_niloticus
ENSPNYG00000003986	-	100	99.795	ENSONIG00000013748	-	100	99.795	Oreochromis_niloticus
ENSPNYG00000003986	-	100	93.224	ENSORLG00000009178	-	100	93.224	Oryzias_latipes
ENSPNYG00000003986	-	100	93.429	ENSORLG00020015515	-	100	93.429	Oryzias_latipes_hni
ENSPNYG00000003986	-	100	93.224	ENSORLG00015006764	-	100	93.224	Oryzias_latipes_hsok
ENSPNYG00000003986	-	97	86.017	ENSOMEG00000022326	-	99	86.017	Oryzias_melastigma
ENSPNYG00000003986	-	97	90.546	ENSPKIG00000024264	ddx61	98	90.021	Paramormyrops_kingsleyae
ENSPNYG00000003986	-	100	89.868	ENSPMGG00000013355	-	100	89.868	Periophthalmus_magnuspinnatus
ENSPNYG00000003986	-	100	92.886	ENSPFOG00000005750	-	100	92.886	Poecilia_formosa
ENSPNYG00000003986	-	100	92.886	ENSPLAG00000000403	-	100	92.886	Poecilia_latipinna
ENSPNYG00000003986	-	100	93.033	ENSPMEG00000023737	-	100	93.033	Poecilia_mexicana
ENSPNYG00000003986	-	98	87.083	ENSPNAG00000024072	ddx61	99	87.083	Pygocentrus_nattereri
ENSPNYG00000003986	-	99	90.083	ENSPNAG00000008742	-	98	90.083	Pygocentrus_nattereri
ENSPNYG00000003986	-	97	89.451	ENSSFOG00015021404	ddx61	97	88.773	Scleropages_formosus
ENSPNYG00000003986	-	96	88.486	ENSSMAG00000006591	ddx61	97	87.789	Scophthalmus_maximus
ENSPNYG00000003986	-	100	94.479	ENSSMAG00000001793	-	100	94.479	Scophthalmus_maximus
ENSPNYG00000003986	-	96	89.126	ENSSDUG00000009713	ddx61	99	86.680	Seriola_dumerili
ENSPNYG00000003986	-	100	96.531	ENSSDUG00000007530	-	100	96.531	Seriola_dumerili
ENSPNYG00000003986	-	100	96.531	ENSSLDG00000007608	-	100	96.531	Seriola_lalandi_dorsalis
ENSPNYG00000003986	-	96	89.126	ENSSLDG00000000132	ddx61	99	86.680	Seriola_lalandi_dorsalis
ENSPNYG00000003986	-	100	97.137	ENSSPAG00000013878	-	100	97.137	Stegastes_partitus
ENSPNYG00000003986	-	96	90.171	ENSSPAG00000001578	ddx61	99	88.017	Stegastes_partitus
ENSPNYG00000003986	-	99	90.369	ENSTRUG00000012432	-	99	90.369	Takifugu_rubripes
ENSPNYG00000003986	-	99	91.250	ENSTNIG00000003560	-	100	91.250	Tetraodon_nigroviridis
ENSPNYG00000003986	-	100	82.857	ENSXCOG00000001406	-	100	82.857	Xiphophorus_couchianus
ENSPNYG00000003986	-	100	92.857	ENSXMAG00000016090	-	100	92.857	Xiphophorus_maculatus