EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPNYG00000004101 (Gene tree)
Gene ID
102215180
Gene Symbol
pabpc1l
Alias
fi20g03|wu:fi20g03|zgc:55855
Full Name
embryonic polyadenylate-binding protein-like
Gene Type
protein_coding
Species
Pundamilia_nyererei
Status
putative
Strand
Plus strand
Length
12005 bases
Position
chrJH419305.1:1882346-1894350
Accession
102215180
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPNYP00000005553PABPPF00658.188.1e-3011
ENSPNYP00000005538PABPPF00658.181e-2911
ENSPNYP00000005519PABPPF00658.185.8e-2211
ENSPNYP00000005553RRM_5PF13893.64.3e-0912
ENSPNYP00000005553RRM_5PF13893.64.3e-0922
ENSPNYP00000005538RRM_5PF13893.65.1e-0912
ENSPNYP00000005538RRM_5PF13893.65.1e-0922
ENSPNYP00000005519RRM_5PF13893.66e-0912
ENSPNYP00000005519RRM_5PF13893.66e-0922
ENSPNYP00000005538RRM_1PF00076.228.8e-8914
ENSPNYP00000005538RRM_1PF00076.228.8e-8924
ENSPNYP00000005538RRM_1PF00076.228.8e-8934
ENSPNYP00000005538RRM_1PF00076.228.8e-8944
ENSPNYP00000005519RRM_1PF00076.221e-8814
ENSPNYP00000005519RRM_1PF00076.221e-8824
ENSPNYP00000005519RRM_1PF00076.221e-8834
ENSPNYP00000005519RRM_1PF00076.221e-8844
ENSPNYP00000005553RRM_1PF00076.223.7e-8214
ENSPNYP00000005553RRM_1PF00076.223.7e-8224
ENSPNYP00000005553RRM_1PF00076.223.7e-8234
ENSPNYP00000005553RRM_1PF00076.223.7e-8244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPNYT00000005681-1737XM_005740501ENSPNYP00000005538578 (aa)XP_005740558-
ENSPNYT00000005660-1779-ENSPNYP00000005519592 (aa)--
ENSPNYT00000005696-1503-ENSPNYP00000005553500 (aa)--
Gene Model
Click here to download ENSPNYG00000004101's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000004101's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPNYG00000004101pabpc1l6839.241ENSPNYG00000013107-9832.967
ENSPNYG00000004101pabpc1l9975.529ENSPNYG00000012578pabpc1b9875.529
ENSPNYG00000004101pabpc1l7031.818ENSPNYG00000021720elavl48731.818
ENSPNYG00000004101pabpc1l6834.884ENSPNYG00000011518celf3a8134.884
ENSPNYG00000004101pabpc1l6943.529ENSPNYG00000010982-6643.529
ENSPNYG00000004101pabpc1l7230.435ENSPNYG00000008384tia18030.435
ENSPNYG00000004101pabpc1l7037.349ENSPNYG00000012700sf3b45238.122
ENSPNYG00000004101pabpc1l5934.884ENSPNYG00000004167celf3b7931.897
ENSPNYG00000004101pabpc1l6035.616ENSPNYG00000015832-5935.616
ENSPNYG00000004101pabpc1l5431.548ENSPNYG00000020763-7531.548
ENSPNYG00000004101pabpc1l7030.534ENSPNYG00000001514ELAVL29930.534
ENSPNYG00000004101pabpc1l6131.250ENSPNYG00000003649tial18331.250
ENSPNYG00000004101pabpc1l9965.650ENSPNYG00000006134pabpc49765.971
ENSPNYG00000004101pabpc1l6837.079ENSPNYG00000012769elavl1a8837.079
ENSPNYG00000004101pabpc1l5937.209ENSPNYG00000017486celf5a6136.735
ENSPNYG00000004101pabpc1l9975.708ENSPNYG00000005192pabpc1a9875.708
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPNYG00000004101pabpc1l9978.409ENSG00000101104PABPC1L9876.235Homo_sapiens
ENSPNYG00000004101pabpc1l9984.807ENSAPOG00000010842pabpc1l9980.583Acanthochromis_polyacanthus
ENSPNYG00000004101pabpc1l9877.108ENSAMEG00000004099PABPC1L10061.934Ailuropoda_melanoleuca
ENSPNYG00000004101pabpc1l10095.817ENSACIG00000021004-10095.817Amphilophus_citrinellus
ENSPNYG00000004101pabpc1l10088.916ENSAOCG00000006167-10082.268Amphiprion_ocellaris
ENSPNYG00000004101pabpc1l10090.133ENSAPEG00000010558-9989.450Amphiprion_percula
ENSPNYG00000004101pabpc1l9994.940ENSATEG00000007428pabpc1l9994.940Anabas_testudineus
ENSPNYG00000004101pabpc1l9978.177ENSAPLG00000008415PABPC1L9978.177Anas_platyrhynchos
ENSPNYG00000004101pabpc1l9976.765ENSACAG00000011841PABPC1L9971.451Anolis_carolinensis
ENSPNYG00000004101pabpc1l9969.794ENSANAG00000026826PABPC1L9869.794Aotus_nancymaae
ENSPNYG00000004101pabpc1l10096.288ENSACLG00000024791pabpc1l9996.288Astatotilapia_calliptera
ENSPNYG00000004101pabpc1l10083.933ENSAMXG00000013552pabpc1l9983.933Astyanax_mexicanus
ENSPNYG00000004101pabpc1l7468.487ENSBTAG00000016849PABPC1L8761.246Bos_taurus
ENSPNYG00000004101pabpc1l7286.014ENSBTAG00000055300-10086.905Bos_taurus
ENSPNYG00000004101pabpc1l9969.794ENSCJAG00000017628PABPC1L9869.794Callithrix_jacchus
ENSPNYG00000004101pabpc1l6881.208ENSCJAG00000038506-10081.034Callithrix_jacchus
ENSPNYG00000004101pabpc1l9970.320ENSCAFG00000009573PABPC1L9970.320Canis_familiaris
ENSPNYG00000004101pabpc1l9973.558ENSCAFG00020013828PABPC1L9773.558Canis_lupus_dingo
ENSPNYG00000004101pabpc1l9774.038ENSCHIG00000025759PABPC1L9074.038Capra_hircus
ENSPNYG00000004101pabpc1l9973.621ENSTSYG00000006645PABPC1L9873.621Carlito_syrichta
ENSPNYG00000004101pabpc1l9968.835ENSCAPG00000014519PABPC1L9968.835Cavia_aperea
ENSPNYG00000004101pabpc1l9970.096ENSCPOG00000013633PABPC1L9963.029Cavia_porcellus
ENSPNYG00000004101pabpc1l9975.532ENSCCAG00000023338PABPC1L9966.234Cebus_capucinus
ENSPNYG00000004101pabpc1l9978.161ENSCATG00000034065PABPC1L9967.488Cercocebus_atys
ENSPNYG00000004101pabpc1l9971.429ENSCLAG00000005298PABPC1L9962.806Chinchilla_lanigera
ENSPNYG00000004101pabpc1l9978.161ENSCSAG00000014242PABPC1L9967.323Chlorocebus_sabaeus
ENSPNYG00000004101pabpc1l8278.657ENSCPBG00000017755-9979.864Chrysemys_picta_bellii
ENSPNYG00000004101pabpc1l6985.496ENSCPBG00000007810-9185.496Chrysemys_picta_bellii
ENSPNYG00000004101pabpc1l8376.190ENSCING00000002796-7476.190Ciona_intestinalis
ENSPNYG00000004101pabpc1l9877.381ENSCSAVG00000004246-9665.366Ciona_savignyi
ENSPNYG00000004101pabpc1l9876.190ENSCSAVG00000003102-10085.714Ciona_savignyi
ENSPNYG00000004101pabpc1l9972.554ENSCANG00000037530PABPC1L9967.323Colobus_angolensis_palliatus
ENSPNYG00000004101pabpc1l9967.146ENSCGRG00001021938Pabpc1l9967.146Cricetulus_griseus_chok1gshd
ENSPNYG00000004101pabpc1l9967.146ENSCGRG00000007946Pabpc1l9967.146Cricetulus_griseus_crigri
ENSPNYG00000004101pabpc1l10081.006ENSCSEG00000021295pabpc1l9981.006Cynoglossus_semilaevis
ENSPNYG00000004101pabpc1l10094.940ENSCVAG00000015943-9996.947Cyprinodon_variegatus
ENSPNYG00000004101pabpc1l9983.413ENSDARG00000002597pabpc1l8895.385Danio_rerio
ENSPNYG00000004101pabpc1l9975.000ENSDNOG00000048450PABPC1L9967.103Dasypus_novemcinctus
ENSPNYG00000004101pabpc1l9970.913ENSDORG00000001067Pabpc1l9870.913Dipodomys_ordii
ENSPNYG00000004101pabpc1l9576.016ENSETEG00000009969PABPC1L7276.016Echinops_telfairi
ENSPNYG00000004101pabpc1l6374.843ENSEASG00005023407-7071.591Equus_asinus_asinus
ENSPNYG00000004101pabpc1l7283.916ENSEASG00005023408-10084.524Equus_asinus_asinus
ENSPNYG00000004101pabpc1l8166.379ENSECAG00000040139-8366.379Equus_caballus
ENSPNYG00000004101pabpc1l9971.942ENSEEUG00000005978PABPC1L9964.967Erinaceus_europaeus
ENSPNYG00000004101pabpc1l10084.123ENSELUG00000001811pabpc1l9984.123Esox_lucius
ENSPNYG00000004101pabpc1l9973.558ENSFCAG00000011692PABPC1L9873.558Felis_catus
ENSPNYG00000004101pabpc1l9171.168ENSFALG00000005372PABPC1L9967.340Ficedula_albicollis
ENSPNYG00000004101pabpc1l9963.484ENSFDAG00000008291PABPC1L9963.484Fukomys_damarensis
ENSPNYG00000004101pabpc1l10093.976ENSFHEG00000003398pabpc1l9993.976Fundulus_heteroclitus
ENSPNYG00000004101pabpc1l9987.740ENSGMOG00000004437pabpc1l9787.740Gadus_morhua
ENSPNYG00000004101pabpc1l9977.255ENSGALG00000004123PABPC1L9980.048Gallus_gallus
ENSPNYG00000004101pabpc1l10079.818ENSGAFG00000021057pabpc1l10079.818Gambusia_affinis
ENSPNYG00000004101pabpc1l9993.253ENSGACG00000002792pabpc1l9993.253Gasterosteus_aculeatus
ENSPNYG00000004101pabpc1l9976.538ENSGAGG00000000589PABPC1L9774.383Gopherus_agassizii
ENSPNYG00000004101pabpc1l9979.310ENSGGOG00000004584PABPC1L9966.830Gorilla_gorilla
ENSPNYG00000004101pabpc1l10096.056ENSHBUG00000006134pabpc1l9996.056Haplochromis_burtoni
ENSPNYG00000004101pabpc1l10071.277ENSHGLG00000008434PABPC1L9963.961Heterocephalus_glaber_female
ENSPNYG00000004101pabpc1l7087.582ENSHGLG00100019506-10087.079Heterocephalus_glaber_male
ENSPNYG00000004101pabpc1l10071.277ENSHGLG00100012151PABPC1L9963.961Heterocephalus_glaber_male
ENSPNYG00000004101pabpc1l10089.074ENSHCOG00000009270pabpc1l10089.074Hippocampus_comes
ENSPNYG00000004101pabpc1l7058.523ENSIPUG00000006780-9359.686Ictalurus_punctatus
ENSPNYG00000004101pabpc1l10082.734ENSIPUG00000012602pabpc1l9982.734Ictalurus_punctatus
ENSPNYG00000004101pabpc1l7060.843ENSIPUG00000006760-9161.878Ictalurus_punctatus
ENSPNYG00000004101pabpc1l9972.662ENSSTOG00000003739PABPC1L9872.662Ictidomys_tridecemlineatus
ENSPNYG00000004101pabpc1l9953.250ENSJJAG00000022406Pabpc1l9953.250Jaculus_jaculus
ENSPNYG00000004101pabpc1l10092.840ENSKMAG00000016847pabpc1l10085.668Kryptolebias_marmoratus
ENSPNYG00000004101pabpc1l10091.924ENSLBEG00000010084pabpc1l9991.924Labrus_bergylta
ENSPNYG00000004101pabpc1l9979.717ENSLACG00000005762PABPC1L9779.717Latimeria_chalumnae
ENSPNYG00000004101pabpc1l9983.257ENSLOCG00000007519pabpc1l9883.257Lepisosteus_oculatus
ENSPNYG00000004101pabpc1l9977.215ENSLAFG00000003553PABPC1L10065.224Loxodonta_africana
ENSPNYG00000004101pabpc1l9979.310ENSMFAG00000040365PABPC1L9967.488Macaca_fascicularis
ENSPNYG00000004101pabpc1l9777.922ENSMNEG00000032298PABPC1L9872.902Macaca_nemestrina
ENSPNYG00000004101pabpc1l9978.161ENSMLEG00000043139PABPC1L9967.488Mandrillus_leucophaeus
ENSPNYG00000004101pabpc1l9693.735ENSMAMG00000011854pabpc1l9793.735Mastacembelus_armatus
ENSPNYG00000004101pabpc1l10096.288ENSMZEG00005023713pabpc1l9996.288Maylandia_zebra
ENSPNYG00000004101pabpc1l9977.404ENSMGAG00000003674PABPC1L9877.404Meleagris_gallopavo
ENSPNYG00000004101pabpc1l9967.554ENSMOCG00000013186Pabpc1l9967.554Microtus_ochrogaster
ENSPNYG00000004101pabpc1l9991.827ENSMMOG00000020574-9096.154Mola_mola
ENSPNYG00000004101pabpc1l9674.347ENSMODG00000016198PABPC1L9874.347Monodelphis_domestica
ENSPNYG00000004101pabpc1l9692.048ENSMALG00000021622pabpc1l9992.048Monopterus_albus
ENSPNYG00000004101pabpc1l9963.529MGP_CAROLIEiJ_G0024627Pabpc1l9959.211Mus_caroli
ENSPNYG00000004101pabpc1l9963.529ENSMUSG00000054582Pabpc1l9959.706Mus_musculus
ENSPNYG00000004101pabpc1l9964.706MGP_PahariEiJ_G0026071Pabpc1l9959.223Mus_pahari
ENSPNYG00000004101pabpc1l9963.529MGP_SPRETEiJ_G0025549Pabpc1l9959.211Mus_spretus
ENSPNYG00000004101pabpc1l9974.519ENSMPUG00000017646PABPC1L9874.519Mustela_putorius_furo
ENSPNYG00000004101pabpc1l9870.853ENSMLUG00000006324PABPC1L9670.853Myotis_lucifugus
ENSPNYG00000004101pabpc1l9964.680ENSNGAG00000010458Pabpc1l9964.680Nannospalax_galili
ENSPNYG00000004101pabpc1l10099.800ENSNBRG00000016633pabpc1l10099.800Neolamprologus_brichardi
ENSPNYG00000004101pabpc1l8172.947ENSMEUG00000007905-8963.472Notamacropus_eugenii
ENSPNYG00000004101pabpc1l9972.902ENSOPRG00000011846PABPC1L9972.902Ochotona_princeps
ENSPNYG00000004101pabpc1l6589.844ENSODEG00000002920-9781.250Octodon_degus
ENSPNYG00000004101pabpc1l9962.264ENSODEG00000015482PABPC1L9962.264Octodon_degus
ENSPNYG00000004101pabpc1l10095.592ENSONIG00000017314pabpc1l9995.592Oreochromis_niloticus
ENSPNYG00000004101pabpc1l8863.656ENSOANG00000015793-10057.951Ornithorhynchus_anatinus
ENSPNYG00000004101pabpc1l9971.223ENSOCUG00000003005PABPC1L9963.256Oryctolagus_cuniculus
ENSPNYG00000004101pabpc1l9991.566ENSORLG00000010322pabpc1l10090.239Oryzias_latipes
ENSPNYG00000004101pabpc1l10091.566ENSORLG00020021193pabpc1l10090.239Oryzias_latipes_hni
ENSPNYG00000004101pabpc1l9991.566ENSORLG00015017018pabpc1l10090.040Oryzias_latipes_hsok
ENSPNYG00000004101pabpc1l10088.889ENSOMEG00000010789pabpc1l10079.847Oryzias_melastigma
ENSPNYG00000004101pabpc1l9973.077ENSOGAG00000032999PABPC1L9973.077Otolemur_garnettii
ENSPNYG00000004101pabpc1l9973.798ENSOARG00000004578PABPC1L9873.798Ovis_aries
ENSPNYG00000004101pabpc1l9978.409ENSPPAG00000039677PABPC1L9872.902Pan_paniscus
ENSPNYG00000004101pabpc1l7265.217ENSPPRG00000019327-9867.593Panthera_pardus
ENSPNYG00000004101pabpc1l9973.558ENSPTIG00000006524PABPC1L9973.558Panthera_tigris_altaica
ENSPNYG00000004101pabpc1l7275.585ENSPTRG00000013531PABPC1L9876.543Pan_troglodytes
ENSPNYG00000004101pabpc1l9978.161ENSPANG00000018788PABPC1L9967.488Papio_anubis
ENSPNYG00000004101pabpc1l10083.693ENSPKIG00000007322pabpc1l9983.693Paramormyrops_kingsleyae
ENSPNYG00000004101pabpc1l6085.849ENSPKIG00000016810-9384.733Paramormyrops_kingsleyae
ENSPNYG00000004101pabpc1l7781.299ENSPSIG00000013289PABPC1L9981.295Pelodiscus_sinensis
ENSPNYG00000004101pabpc1l7295.327ENSPMGG00000023117pabpc1l9794.419Periophthalmus_magnuspinnatus
ENSPNYG00000004101pabpc1l7091.411ENSPMGG00000023121-9186.154Periophthalmus_magnuspinnatus
ENSPNYG00000004101pabpc1l9967.626ENSPEMG00000020671Pabpc1l9958.738Peromyscus_maniculatus_bairdii
ENSPNYG00000004101pabpc1l10094.217ENSPFOG00000013241pabpc1l9985.203Poecilia_formosa
ENSPNYG00000004101pabpc1l10094.217ENSPLAG00000017490-9987.873Poecilia_latipinna
ENSPNYG00000004101pabpc1l7299.048ENSPLAG00000023686-9498.462Poecilia_latipinna
ENSPNYG00000004101pabpc1l10094.217ENSPMEG00000007677pabpc1l9294.217Poecilia_mexicana
ENSPNYG00000004101pabpc1l7299.048ENSPMEG00000009185-9098.462Poecilia_mexicana
ENSPNYG00000004101pabpc1l7695.276ENSPREG00000015886pabpc1l10095.146Poecilia_reticulata
ENSPNYG00000004101pabpc1l9979.310ENSPPYG00000011042PABPC1L9772.662Pongo_abelii
ENSPNYG00000004101pabpc1l7082.051ENSPCAG00000011787-7584.375Procavia_capensis
ENSPNYG00000004101pabpc1l9967.488ENSPCOG00000020630PABPC1L9967.488Propithecus_coquereli
ENSPNYG00000004101pabpc1l9971.807ENSPVAG00000012663PABPC1L9871.807Pteropus_vampyrus
ENSPNYG00000004101pabpc1l10075.000ENSPNAG00000021248pabpc1l10069.378Pygocentrus_nattereri
ENSPNYG00000004101pabpc1l9967.874ENSRNOG00000012750Pabpc1l9959.578Rattus_norvegicus
ENSPNYG00000004101pabpc1l9978.161ENSRBIG00000035381PABPC1L9967.323Rhinopithecus_bieti
ENSPNYG00000004101pabpc1l9978.161ENSRROG00000044498PABPC1L9872.422Rhinopithecus_roxellana
ENSPNYG00000004101pabpc1l9969.794ENSSBOG00000009532-9869.794Saimiri_boliviensis_boliviensis
ENSPNYG00000004101pabpc1l9970.513ENSSHAG00000011446PABPC1L10070.513Sarcophilus_harrisii
ENSPNYG00000004101pabpc1l10080.822ENSSFOG00015017304pabpc1l9981.007Scleropages_formosus
ENSPNYG00000004101pabpc1l10093.976ENSSMAG00000010516pabpc1l9898.450Scophthalmus_maximus
ENSPNYG00000004101pabpc1l10093.735ENSSDUG00000014743pabpc1l9993.735Seriola_dumerili
ENSPNYG00000004101pabpc1l9994.366ENSSLDG00000006981pabpc1l10093.151Seriola_lalandi_dorsalis
ENSPNYG00000004101pabpc1l9975.626ENSSPUG00000004233PABPC1L9970.016Sphenodon_punctatus
ENSPNYG00000004101pabpc1l10084.023ENSSPAG00000017137pabpc1l9884.023Stegastes_partitus
ENSPNYG00000004101pabpc1l9967.705ENSSSCG00000007382PABPC1L9967.705Sus_scrofa
ENSPNYG00000004101pabpc1l9974.388ENSTGUG00000005114PABPC1L9874.388Taeniopygia_guttata
ENSPNYG00000004101pabpc1l9687.298ENSTRUG00000011085pabpc1l9687.298Takifugu_rubripes
ENSPNYG00000004101pabpc1l9983.945ENSTNIG00000017903pabpc1l9880.515Tetraodon_nigroviridis
ENSPNYG00000004101pabpc1l9477.055ENSTBEG00000002851PABPC1L7977.055Tupaia_belangeri
ENSPNYG00000004101pabpc1l9371.635ENSTTRG00000007618PABPC1L10065.261Tursiops_truncatus
ENSPNYG00000004101pabpc1l9966.949ENSUAMG00000017682PABPC1L9966.949Ursus_americanus
ENSPNYG00000004101pabpc1l7674.359ENSUMAG00000025436PABPC1L9273.538Ursus_maritimus
ENSPNYG00000004101pabpc1l9875.494ENSVVUG00000018939PABPC1L9875.494Vulpes_vulpes
ENSPNYG00000004101pabpc1l9972.477ENSXETG00000022831pabpc1l9967.891Xenopus_tropicalis
ENSPNYG00000004101pabpc1l9993.494ENSXCOG00000005459pabpc1l9993.617Xiphophorus_couchianus
ENSPNYG00000004101pabpc1l10093.494ENSXMAG00000017135pabpc1l9986.940Xiphophorus_maculatus

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