EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000004279 (Gene tree)
Gene ID: 102214131
Gene Symbol: prpf3
Alias: HPRP3|wu:fa11f05
Full Name: pre-mRNA processing factor 3
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 10915 bases
Position: chrJH419250.1:2838252-2849166
Accession: 102214131
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000005625	PRP3	PF08572.10	3.7e-76	1	1
ENSPNYP00000005598	PRP3	PF08572.10	3.9e-76	1	1
ENSPNYP00000005580	PRP3	PF08572.10	4e-76	1	1
ENSPNYP00000005625	PWI	PF01480.17	1.3e-11	1	1
ENSPNYP00000005598	PWI	PF01480.17	1.4e-11	1	1
ENSPNYP00000005580	PWI	PF01480.17	1.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000005769	-	2064	-	ENSPNYP00000005625	687 (aa)	-	-
ENSPNYT00000005742	-	3070	XM_005732067	ENSPNYP00000005598	711 (aa)	XP_005732124	UPI0003AFEA28
ENSPNYT00000005723	-	3144	-	ENSPNYP00000005580	723 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000004279's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000004279's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000004279	prpf3	99	72.439	ENSG00000117360	PRPF3	100	72.727	Homo_sapiens
ENSPNYG00000004279	prpf3	100	89.311	ENSAPOG00000015584	prpf3	100	89.311	Acanthochromis_polyacanthus
ENSPNYG00000004279	prpf3	99	72.583	ENSAMEG00000001630	PRPF3	100	72.872	Ailuropoda_melanoleuca
ENSPNYG00000004279	prpf3	100	91.702	ENSACIG00000007876	prpf3	100	91.702	Amphilophus_citrinellus
ENSPNYG00000004279	prpf3	100	89.311	ENSAOCG00000011449	prpf3	100	89.311	Amphiprion_ocellaris
ENSPNYG00000004279	prpf3	100	90.014	ENSATEG00000023583	prpf3	100	89.971	Anabas_testudineus
ENSPNYG00000004279	prpf3	99	73.121	ENSAPLG00000002440	PRPF3	100	73.121	Anas_platyrhynchos
ENSPNYG00000004279	prpf3	99	71.530	ENSACAG00000003176	PRPF3	100	73.094	Anolis_carolinensis
ENSPNYG00000004279	prpf3	99	72.439	ENSANAG00000026138	PRPF3	100	72.727	Aotus_nancymaae
ENSPNYG00000004279	prpf3	100	98.690	ENSACLG00000020127	prpf3	100	98.690	Astatotilapia_calliptera
ENSPNYG00000004279	prpf3	100	82.353	ENSAMXG00000007306	prpf3	100	81.793	Astyanax_mexicanus
ENSPNYG00000004279	prpf3	99	72.439	ENSBTAG00000013946	PRPF3	100	72.727	Bos_taurus
ENSPNYG00000004279	prpf3	81	39.076	WBGene00010844	prp-3	95	36.048	Caenorhabditis_elegans
ENSPNYG00000004279	prpf3	99	72.439	ENSCJAG00000009926	PRPF3	100	72.727	Callithrix_jacchus
ENSPNYG00000004279	prpf3	99	72.439	ENSCAFG00000011820	PRPF3	100	72.727	Canis_familiaris
ENSPNYG00000004279	prpf3	81	72.352	ENSCAFG00020019653	PRPF3	100	72.890	Canis_lupus_dingo
ENSPNYG00000004279	prpf3	99	72.439	ENSCHIG00000015434	PRPF3	100	72.727	Capra_hircus
ENSPNYG00000004279	prpf3	99	72.727	ENSTSYG00000001383	PRPF3	100	73.016	Carlito_syrichta
ENSPNYG00000004279	prpf3	93	63.142	ENSCAPG00000017812	PRPF3	95	63.297	Cavia_aperea
ENSPNYG00000004279	prpf3	99	72.583	ENSCPOG00000008068	PRPF3	100	72.872	Cavia_porcellus
ENSPNYG00000004279	prpf3	99	72.439	ENSCCAG00000026380	PRPF3	100	72.727	Cebus_capucinus
ENSPNYG00000004279	prpf3	99	59.684	ENSCATG00000041778	PRPF3	100	60.172	Cercocebus_atys
ENSPNYG00000004279	prpf3	99	72.583	ENSCLAG00000015009	PRPF3	100	72.872	Chinchilla_lanigera
ENSPNYG00000004279	prpf3	76	81.022	ENSCHOG00000011645	PRPF3	76	80.657	Choloepus_hoffmanni
ENSPNYG00000004279	prpf3	99	72.832	ENSCPBG00000008216	PRPF3	100	73.121	Chrysemys_picta_bellii
ENSPNYG00000004279	prpf3	60	58.852	ENSCING00000003312	-	99	58.852	Ciona_intestinalis
ENSPNYG00000004279	prpf3	80	54.025	ENSCSAVG00000008720	-	94	54.204	Ciona_savignyi
ENSPNYG00000004279	prpf3	99	71.861	ENSCANG00000036769	PRPF3	100	72.150	Colobus_angolensis_palliatus
ENSPNYG00000004279	prpf3	99	72.439	ENSCGRG00001019100	Prpf3	100	72.727	Cricetulus_griseus_chok1gshd
ENSPNYG00000004279	prpf3	99	72.439	ENSCGRG00000007322	Prpf3	100	72.727	Cricetulus_griseus_crigri
ENSPNYG00000004279	prpf3	100	87.201	ENSCSEG00000002532	prpf3	100	89.130	Cynoglossus_semilaevis
ENSPNYG00000004279	prpf3	100	87.914	ENSCVAG00000009318	prpf3	100	87.914	Cyprinodon_variegatus
ENSPNYG00000004279	prpf3	100	81.402	ENSDARG00000086425	prpf3	100	81.402	Danio_rerio
ENSPNYG00000004279	prpf3	96	73.509	ENSDNOG00000005904	PRPF3	100	69.120	Dasypus_novemcinctus
ENSPNYG00000004279	prpf3	93	72.516	ENSDORG00000008664	Prpf3	100	73.023	Dipodomys_ordii
ENSPNYG00000004279	prpf3	80	51.742	FBgn0036915	Prp3	99	52.632	Drosophila_melanogaster
ENSPNYG00000004279	prpf3	99	72.439	ENSETEG00000019124	PRPF3	100	72.872	Echinops_telfairi
ENSPNYG00000004279	prpf3	100	61.446	ENSEBUG00000011680	prpf3	100	61.312	Eptatretus_burgeri
ENSPNYG00000004279	prpf3	99	72.294	ENSEASG00005001566	PRPF3	100	72.583	Equus_asinus_asinus
ENSPNYG00000004279	prpf3	99	72.439	ENSECAG00000019840	PRPF3	100	72.727	Equus_caballus
ENSPNYG00000004279	prpf3	84	72.398	ENSEEUG00000007338	PRPF3	85	72.172	Erinaceus_europaeus
ENSPNYG00000004279	prpf3	100	76.143	ENSELUG00000013624	prpf3	100	76.102	Esox_lucius
ENSPNYG00000004279	prpf3	99	72.439	ENSFCAG00000013940	PRPF3	100	72.727	Felis_catus
ENSPNYG00000004279	prpf3	99	72.399	ENSFDAG00000010365	PRPF3	100	72.872	Fukomys_damarensis
ENSPNYG00000004279	prpf3	100	87.936	ENSFHEG00000021746	prpf3	100	87.936	Fundulus_heteroclitus
ENSPNYG00000004279	prpf3	100	82.419	ENSGMOG00000008535	prpf3	100	82.419	Gadus_morhua
ENSPNYG00000004279	prpf3	99	73.266	ENSGALG00000028205	PRPF3	100	73.266	Gallus_gallus
ENSPNYG00000004279	prpf3	100	85.776	ENSGAFG00000012671	prpf3	100	85.776	Gambusia_affinis
ENSPNYG00000004279	prpf3	100	86.076	ENSGACG00000011792	prpf3	100	85.935	Gasterosteus_aculeatus
ENSPNYG00000004279	prpf3	99	72.832	ENSGAGG00000013765	PRPF3	100	75.315	Gopherus_agassizii
ENSPNYG00000004279	prpf3	86	77.059	ENSGGOG00000013174	PRPF3	100	76.765	Gorilla_gorilla
ENSPNYG00000004279	prpf3	100	99.854	ENSHBUG00000003493	prpf3	100	99.854	Haplochromis_burtoni
ENSPNYG00000004279	prpf3	99	53.111	ENSHGLG00000016033	-	100	52.967	Heterocephalus_glaber_female
ENSPNYG00000004279	prpf3	99	72.583	ENSHGLG00000016569	PRPF3	100	72.872	Heterocephalus_glaber_female
ENSPNYG00000004279	prpf3	99	52.967	ENSHGLG00100008951	-	100	52.822	Heterocephalus_glaber_male
ENSPNYG00000004279	prpf3	99	72.583	ENSHGLG00100007590	PRPF3	100	72.872	Heterocephalus_glaber_male
ENSPNYG00000004279	prpf3	100	81.116	ENSHCOG00000014058	prpf3	100	81.259	Hippocampus_comes
ENSPNYG00000004279	prpf3	100	82.000	ENSIPUG00000000902	PRPF3	100	81.429	Ictalurus_punctatus
ENSPNYG00000004279	prpf3	99	72.439	ENSSTOG00000001889	PRPF3	100	72.727	Ictidomys_tridecemlineatus
ENSPNYG00000004279	prpf3	100	87.482	ENSKMAG00000001390	prpf3	100	87.482	Kryptolebias_marmoratus
ENSPNYG00000004279	prpf3	100	89.733	ENSLBEG00000026310	prpf3	100	89.733	Labrus_bergylta
ENSPNYG00000004279	prpf3	93	68.210	ENSLACG00000010541	PRPF3	100	68.056	Latimeria_chalumnae
ENSPNYG00000004279	prpf3	99	72.439	ENSLAFG00000004713	PRPF3	100	72.727	Loxodonta_africana
ENSPNYG00000004279	prpf3	99	72.439	ENSMFAG00000039791	PRPF3	100	72.727	Macaca_fascicularis
ENSPNYG00000004279	prpf3	92	72.152	ENSMMUG00000016301	PRPF3	97	73.667	Macaca_mulatta
ENSPNYG00000004279	prpf3	99	72.439	ENSMNEG00000038161	PRPF3	100	72.727	Macaca_nemestrina
ENSPNYG00000004279	prpf3	86	77.059	ENSMLEG00000040609	PRPF3	100	76.765	Mandrillus_leucophaeus
ENSPNYG00000004279	prpf3	98	48.980	ENSMLEG00000041065	-	97	48.834	Mandrillus_leucophaeus
ENSPNYG00000004279	prpf3	100	88.045	ENSMAMG00000014968	prpf3	100	88.045	Mastacembelus_armatus
ENSPNYG00000004279	prpf3	100	98.594	ENSMZEG00005015970	prpf3	100	98.594	Maylandia_zebra
ENSPNYG00000004279	prpf3	99	73.266	ENSMGAG00000000707	PRPF3	100	73.266	Meleagris_gallopavo
ENSPNYG00000004279	prpf3	99	72.439	ENSMAUG00000017112	Prpf3	100	72.727	Mesocricetus_auratus
ENSPNYG00000004279	prpf3	99	72.439	ENSMICG00000015386	PRPF3	100	75.000	Microcebus_murinus
ENSPNYG00000004279	prpf3	99	72.439	ENSMOCG00000000242	Prpf3	100	72.727	Microtus_ochrogaster
ENSPNYG00000004279	prpf3	100	83.101	ENSMMOG00000016131	prpf3	100	83.286	Mola_mola
ENSPNYG00000004279	prpf3	99	72.399	ENSMODG00000018774	PRPF3	100	72.688	Monodelphis_domestica
ENSPNYG00000004279	prpf3	100	85.387	ENSMALG00000007257	prpf3	100	86.207	Monopterus_albus
ENSPNYG00000004279	prpf3	99	72.583	MGP_CAROLIEiJ_G0025354	Prpf3	100	72.872	Mus_caroli
ENSPNYG00000004279	prpf3	99	72.583	ENSMUSG00000015748	Prpf3	100	72.872	Mus_musculus
ENSPNYG00000004279	prpf3	99	72.727	MGP_PahariEiJ_G0026798	Prpf3	100	73.016	Mus_pahari
ENSPNYG00000004279	prpf3	99	72.583	MGP_SPRETEiJ_G0026298	Prpf3	100	72.872	Mus_spretus
ENSPNYG00000004279	prpf3	99	70.809	ENSMPUG00000005080	PRPF3	100	71.098	Mustela_putorius_furo
ENSPNYG00000004279	prpf3	99	72.478	ENSMLUG00000004646	-	100	72.583	Myotis_lucifugus
ENSPNYG00000004279	prpf3	99	72.439	ENSNGAG00000000910	Prpf3	100	72.727	Nannospalax_galili
ENSPNYG00000004279	prpf3	100	99.156	ENSNBRG00000003462	prpf3	100	99.156	Neolamprologus_brichardi
ENSPNYG00000004279	prpf3	90	73.183	ENSNLEG00000009841	PRPF3	99	73.667	Nomascus_leucogenys
ENSPNYG00000004279	prpf3	83	64.103	ENSMEUG00000008733	PRPF3	89	65.385	Notamacropus_eugenii
ENSPNYG00000004279	prpf3	99	72.622	ENSOPRG00000010139	PRPF3	100	72.911	Ochotona_princeps
ENSPNYG00000004279	prpf3	99	72.583	ENSODEG00000011363	-	100	72.872	Octodon_degus
ENSPNYG00000004279	prpf3	99	54.298	ENSODEG00000014412	-	100	54.441	Octodon_degus
ENSPNYG00000004279	prpf3	100	97.750	ENSONIG00000006394	prpf3	100	97.750	Oreochromis_niloticus
ENSPNYG00000004279	prpf3	99	55.878	ENSOANG00000015441	PRPF3	100	55.878	Ornithorhynchus_anatinus
ENSPNYG00000004279	prpf3	99	72.439	ENSOCUG00000011760	PRPF3	100	72.727	Oryctolagus_cuniculus
ENSPNYG00000004279	prpf3	100	86.357	ENSORLG00000010330	prpf3	100	85.935	Oryzias_latipes
ENSPNYG00000004279	prpf3	100	86.357	ENSORLG00020009054	prpf3	100	85.935	Oryzias_latipes_hni
ENSPNYG00000004279	prpf3	100	86.217	ENSORLG00015015016	prpf3	100	85.795	Oryzias_latipes_hsok
ENSPNYG00000004279	prpf3	100	87.201	ENSOMEG00000000940	prpf3	100	87.201	Oryzias_melastigma
ENSPNYG00000004279	prpf3	99	68.678	ENSOGAG00000005352	PRPF3	100	68.966	Otolemur_garnettii
ENSPNYG00000004279	prpf3	99	72.439	ENSOARG00000020798	PRPF3	100	72.727	Ovis_aries
ENSPNYG00000004279	prpf3	99	72.294	ENSPPAG00000030983	PRPF3	100	72.583	Pan_paniscus
ENSPNYG00000004279	prpf3	98	55.653	ENSPPAG00000043769	-	99	55.066	Pan_paniscus
ENSPNYG00000004279	prpf3	99	72.439	ENSPPRG00000000731	PRPF3	100	72.727	Panthera_pardus
ENSPNYG00000004279	prpf3	99	72.439	ENSPTIG00000005516	PRPF3	100	72.727	Panthera_tigris_altaica
ENSPNYG00000004279	prpf3	98	54.772	ENSPTRG00000047819	-	99	54.185	Pan_troglodytes
ENSPNYG00000004279	prpf3	99	72.439	ENSPTRG00000001254	PRPF3	100	72.727	Pan_troglodytes
ENSPNYG00000004279	prpf3	99	72.294	ENSPANG00000000499	PRPF3	100	72.583	Papio_anubis
ENSPNYG00000004279	prpf3	100	81.250	ENSPKIG00000010501	prpf3	100	80.824	Paramormyrops_kingsleyae
ENSPNYG00000004279	prpf3	99	73.227	ENSPSIG00000014877	PRPF3	100	73.227	Pelodiscus_sinensis
ENSPNYG00000004279	prpf3	100	76.744	ENSPMGG00000007776	prpf3	100	76.453	Periophthalmus_magnuspinnatus
ENSPNYG00000004279	prpf3	99	72.439	ENSPEMG00000011672	Prpf3	100	72.727	Peromyscus_maniculatus_bairdii
ENSPNYG00000004279	prpf3	63	74.142	ENSPMAG00000005588	prpf3	99	72.788	Petromyzon_marinus
ENSPNYG00000004279	prpf3	99	72.399	ENSPCIG00000008795	PRPF3	100	72.688	Phascolarctos_cinereus
ENSPNYG00000004279	prpf3	100	86.798	ENSPFOG00000013638	prpf3	100	86.798	Poecilia_formosa
ENSPNYG00000004279	prpf3	100	86.494	ENSPLAG00000018103	prpf3	100	86.494	Poecilia_latipinna
ENSPNYG00000004279	prpf3	100	85.935	ENSPMEG00000023546	prpf3	100	86.494	Poecilia_mexicana
ENSPNYG00000004279	prpf3	100	86.063	ENSPREG00000017216	prpf3	100	86.063	Poecilia_reticulata
ENSPNYG00000004279	prpf3	76	63.027	ENSPPYG00000018646	-	99	63.602	Pongo_abelii
ENSPNYG00000004279	prpf3	93	71.473	ENSPPYG00000000900	PRPF3	99	71.783	Pongo_abelii
ENSPNYG00000004279	prpf3	85	74.660	ENSPCAG00000014908	PRPF3	85	75.000	Procavia_capensis
ENSPNYG00000004279	prpf3	99	72.294	ENSPCOG00000013828	PRPF3	100	72.583	Propithecus_coquereli
ENSPNYG00000004279	prpf3	99	72.190	ENSPVAG00000013472	PRPF3	100	72.478	Pteropus_vampyrus
ENSPNYG00000004279	prpf3	100	81.653	ENSPNAG00000001799	prpf3	100	81.092	Pygocentrus_nattereri
ENSPNYG00000004279	prpf3	99	72.727	ENSRNOG00000025629	Prpf3	100	73.016	Rattus_norvegicus
ENSPNYG00000004279	prpf3	83	70.213	ENSRBIG00000028854	PRPF3	98	69.504	Rhinopithecus_bieti
ENSPNYG00000004279	prpf3	99	72.439	ENSRROG00000027464	PRPF3	100	72.727	Rhinopithecus_roxellana
ENSPNYG00000004279	prpf3	99	65.945	ENSSBOG00000033104	PRPF3	100	66.234	Saimiri_boliviensis_boliviensis
ENSPNYG00000004279	prpf3	99	72.150	ENSSHAG00000009548	PRPF3	100	72.439	Sarcophilus_harrisii
ENSPNYG00000004279	prpf3	100	82.821	ENSSFOG00015022014	prpf3	100	82.263	Scleropages_formosus
ENSPNYG00000004279	prpf3	100	88.748	ENSSMAG00000015739	prpf3	100	88.748	Scophthalmus_maximus
ENSPNYG00000004279	prpf3	100	85.137	ENSSDUG00000006840	prpf3	100	85.859	Seriola_dumerili
ENSPNYG00000004279	prpf3	100	91.421	ENSSLDG00000015423	prpf3	100	91.421	Seriola_lalandi_dorsalis
ENSPNYG00000004279	prpf3	99	72.399	ENSSARG00000011064	PRPF3	100	72.688	Sorex_araneus
ENSPNYG00000004279	prpf3	99	72.365	ENSSPUG00000000809	PRPF3	100	72.507	Sphenodon_punctatus
ENSPNYG00000004279	prpf3	100	90.436	ENSSPAG00000018721	prpf3	100	90.436	Stegastes_partitus
ENSPNYG00000004279	prpf3	99	72.439	ENSSSCG00000030119	PRPF3	100	75.000	Sus_scrofa
ENSPNYG00000004279	prpf3	99	64.121	ENSTGUG00000004552	PRPF3	100	63.977	Taeniopygia_guttata
ENSPNYG00000004279	prpf3	100	83.261	ENSTRUG00000014923	prpf3	100	83.261	Takifugu_rubripes
ENSPNYG00000004279	prpf3	99	83.097	ENSTNIG00000008058	prpf3	100	82.812	Tetraodon_nigroviridis
ENSPNYG00000004279	prpf3	81	71.655	ENSTBEG00000014072	PRPF3	88	72.789	Tupaia_belangeri
ENSPNYG00000004279	prpf3	99	67.197	ENSTTRG00000010616	PRPF3	100	67.486	Tursiops_truncatus
ENSPNYG00000004279	prpf3	80	75.180	ENSUAMG00000009345	PRPF3	100	75.000	Ursus_americanus
ENSPNYG00000004279	prpf3	99	72.439	ENSUMAG00000003720	PRPF3	100	72.727	Ursus_maritimus
ENSPNYG00000004279	prpf3	88	76.871	ENSVPAG00000005425	PRPF3	89	76.923	Vicugna_pacos
ENSPNYG00000004279	prpf3	99	72.439	ENSVVUG00000007933	PRPF3	100	72.727	Vulpes_vulpes
ENSPNYG00000004279	prpf3	99	71.306	ENSXETG00000018654	prpf3	100	71.449	Xenopus_tropicalis
ENSPNYG00000004279	prpf3	100	86.494	ENSXMAG00000016347	prpf3	100	86.494	Xiphophorus_maculatus