EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000004476 (Gene tree)
Gene ID: 102195043
Gene Symbol: pop1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 11877 bases
Position: chrJH419330.1:155149-167025
Accession: 102195043
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000005798	POP1	PF06978.11	5.9e-33	1	2
ENSPNYP00000005798	POP1	PF06978.11	5.9e-33	2	2
ENSPNYP00000005798	POPLD	PF08170.12	1.8e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000005948	-	2718	XM_005742915	ENSPNYP00000005798	905 (aa)	XP_005742972	-

Gene Model

Click here to download ENSPNYG00000004476's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000004476's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000004476	pop1	99	47.972	ENSG00000104356	POP1	89	49.032	Homo_sapiens
ENSPNYG00000004476	pop1	100	74.721	ENSAPOG00000008198	pop1	100	74.822	Acanthochromis_polyacanthus
ENSPNYG00000004476	pop1	97	48.287	ENSAMEG00000000556	POP1	89	48.810	Ailuropoda_melanoleuca
ENSPNYG00000004476	pop1	100	83.544	ENSACIG00000004169	POP1	100	83.544	Amphilophus_citrinellus
ENSPNYG00000004476	pop1	100	74.390	ENSAOCG00000010991	pop1	100	74.797	Amphiprion_ocellaris
ENSPNYG00000004476	pop1	100	74.421	ENSAPEG00000007607	pop1	100	74.737	Amphiprion_percula
ENSPNYG00000004476	pop1	100	71.109	ENSATEG00000024814	POP1	100	71.589	Anabas_testudineus
ENSPNYG00000004476	pop1	94	48.710	ENSAPLG00000014418	POP1	97	48.537	Anas_platyrhynchos
ENSPNYG00000004476	pop1	94	46.752	ENSACAG00000016083	POP1	89	46.674	Anolis_carolinensis
ENSPNYG00000004476	pop1	88	50.613	ENSANAG00000026360	POP1	89	62.054	Aotus_nancymaae
ENSPNYG00000004476	pop1	100	89.817	ENSACLG00000010951	pop1	100	89.817	Astatotilapia_calliptera
ENSPNYG00000004476	pop1	100	55.721	ENSAMXG00000014483	POP1	100	55.423	Astyanax_mexicanus
ENSPNYG00000004476	pop1	95	49.840	ENSBTAG00000012596	POP1	89	49.946	Bos_taurus
ENSPNYG00000004476	pop1	100	46.072	ENSCJAG00000015567	POP1	90	48.335	Callithrix_jacchus
ENSPNYG00000004476	pop1	95	50.000	ENSCAFG00000000469	POP1	89	49.776	Canis_familiaris
ENSPNYG00000004476	pop1	95	48.817	ENSCAFG00020026765	POP1	89	48.587	Canis_lupus_dingo
ENSPNYG00000004476	pop1	90	55.556	ENSCHIG00000017066	POP1	89	48.599	Capra_hircus
ENSPNYG00000004476	pop1	99	47.523	ENSTSYG00000003097	POP1	89	48.495	Carlito_syrichta
ENSPNYG00000004476	pop1	100	45.038	ENSCAPG00000007251	POP1	89	47.380	Cavia_aperea
ENSPNYG00000004476	pop1	100	46.583	ENSCPOG00000002901	POP1	89	49.028	Cavia_porcellus
ENSPNYG00000004476	pop1	100	46.304	ENSCCAG00000018939	POP1	90	48.120	Cebus_capucinus
ENSPNYG00000004476	pop1	95	48.349	ENSCATG00000040916	POP1	89	48.176	Cercocebus_atys
ENSPNYG00000004476	pop1	99	48.423	ENSCLAG00000007208	POP1	86	49.459	Chinchilla_lanigera
ENSPNYG00000004476	pop1	95	48.773	ENSCSAG00000012340	POP1	98	48.599	Chlorocebus_sabaeus
ENSPNYG00000004476	pop1	97	46.162	ENSCHOG00000011432	POP1	93	46.703	Choloepus_hoffmanni
ENSPNYG00000004476	pop1	95	50.816	ENSCPBG00000006373	POP1	88	51.050	Chrysemys_picta_bellii
ENSPNYG00000004476	pop1	95	48.562	ENSCANG00000001647	POP1	89	48.391	Colobus_angolensis_palliatus
ENSPNYG00000004476	pop1	94	48.246	ENSCGRG00001017308	Pop1	89	48.246	Cricetulus_griseus_chok1gshd
ENSPNYG00000004476	pop1	100	43.571	ENSCGRG00000010824	Pop1	91	44.855	Cricetulus_griseus_crigri
ENSPNYG00000004476	pop1	100	66.162	ENSCSEG00000008737	POP1	100	66.263	Cynoglossus_semilaevis
ENSPNYG00000004476	pop1	100	67.449	ENSCVAG00000022248	pop1	100	67.040	Cyprinodon_variegatus
ENSPNYG00000004476	pop1	95	46.202	ENSDNOG00000019974	POP1	89	45.952	Dasypus_novemcinctus
ENSPNYG00000004476	pop1	97	44.609	ENSDORG00000015384	Pop1	88	45.094	Dipodomys_ordii
ENSPNYG00000004476	pop1	84	49.194	ENSETEG00000007839	POP1	77	49.782	Echinops_telfairi
ENSPNYG00000004476	pop1	50	36.495	ENSEBUG00000014694	-	99	36.907	Eptatretus_burgeri
ENSPNYG00000004476	pop1	97	48.438	ENSEASG00005003189	POP1	88	48.860	Equus_asinus_asinus
ENSPNYG00000004476	pop1	97	47.889	ENSECAG00000024236	POP1	89	49.134	Equus_caballus
ENSPNYG00000004476	pop1	54	78.261	ENSEEUG00000003050	-	53	78.261	Erinaceus_europaeus
ENSPNYG00000004476	pop1	100	60.631	ENSELUG00000003526	pop1	100	60.834	Esox_lucius
ENSPNYG00000004476	pop1	97	47.817	ENSFCAG00000002168	POP1	89	48.321	Felis_catus
ENSPNYG00000004476	pop1	94	48.973	ENSFALG00000005711	POP1	89	48.584	Ficedula_albicollis
ENSPNYG00000004476	pop1	99	46.239	ENSFDAG00000017068	POP1	89	47.957	Fukomys_damarensis
ENSPNYG00000004476	pop1	100	68.923	ENSFHEG00000019518	pop1	100	68.583	Fundulus_heteroclitus
ENSPNYG00000004476	pop1	100	61.070	ENSGMOG00000000659	POP1	100	61.070	Gadus_morhua
ENSPNYG00000004476	pop1	100	66.837	ENSGAFG00000019770	POP1	100	67.280	Gambusia_affinis
ENSPNYG00000004476	pop1	100	62.201	ENSGACG00000003499	pop1	94	71.739	Gasterosteus_aculeatus
ENSPNYG00000004476	pop1	95	50.983	ENSGAGG00000011737	POP1	87	50.662	Gopherus_agassizii
ENSPNYG00000004476	pop1	99	48.073	ENSGGOG00000003176	POP1	89	49.032	Gorilla_gorilla
ENSPNYG00000004476	pop1	100	90.326	ENSHBUG00000021583	pop1	100	90.326	Haplochromis_burtoni
ENSPNYG00000004476	pop1	94	49.140	ENSHGLG00000006029	POP1	89	49.140	Heterocephalus_glaber_female
ENSPNYG00000004476	pop1	94	49.140	ENSHGLG00100016879	POP1	89	49.140	Heterocephalus_glaber_male
ENSPNYG00000004476	pop1	100	65.874	ENSHCOG00000013888	pop1	100	65.253	Hippocampus_comes
ENSPNYG00000004476	pop1	99	53.663	ENSIPUG00000018336	pop1	100	53.511	Ictalurus_punctatus
ENSPNYG00000004476	pop1	95	48.568	ENSSTOG00000011455	POP1	86	48.339	Ictidomys_tridecemlineatus
ENSPNYG00000004476	pop1	97	47.979	ENSJJAG00000013325	Pop1	88	48.613	Jaculus_jaculus
ENSPNYG00000004476	pop1	100	69.310	ENSKMAG00000001346	POP1	100	69.001	Kryptolebias_marmoratus
ENSPNYG00000004476	pop1	100	66.247	ENSLBEG00000024457	POP1	100	66.247	Labrus_bergylta
ENSPNYG00000004476	pop1	95	51.314	ENSLACG00000012498	POP1	95	51.116	Latimeria_chalumnae
ENSPNYG00000004476	pop1	100	52.437	ENSLOCG00000009817	POP1	89	56.052	Lepisosteus_oculatus
ENSPNYG00000004476	pop1	97	49.375	ENSLAFG00000010770	POP1	89	49.837	Loxodonta_africana
ENSPNYG00000004476	pop1	95	48.456	ENSMFAG00000000347	POP1	89	48.283	Macaca_fascicularis
ENSPNYG00000004476	pop1	95	48.723	ENSMNEG00000036870	POP1	89	48.553	Macaca_nemestrina
ENSPNYG00000004476	pop1	95	48.562	ENSMLEG00000034986	POP1	89	48.391	Mandrillus_leucophaeus
ENSPNYG00000004476	pop1	100	70.892	ENSMAMG00000004040	pop1	100	71.400	Mastacembelus_armatus
ENSPNYG00000004476	pop1	100	90.020	ENSMZEG00005025448	pop1	100	90.020	Maylandia_zebra
ENSPNYG00000004476	pop1	100	45.489	ENSMGAG00000012167	POP1	100	45.774	Meleagris_gallopavo
ENSPNYG00000004476	pop1	98	47.817	ENSMAUG00000017537	Pop1	89	48.468	Mesocricetus_auratus
ENSPNYG00000004476	pop1	97	47.521	ENSMICG00000004361	POP1	89	47.901	Microcebus_murinus
ENSPNYG00000004476	pop1	95	48.652	ENSMOCG00000006356	Pop1	89	48.637	Microtus_ochrogaster
ENSPNYG00000004476	pop1	100	70.513	ENSMMOG00000018242	pop1	100	70.703	Mola_mola
ENSPNYG00000004476	pop1	95	47.452	ENSMODG00000006561	POP1	88	47.747	Monodelphis_domestica
ENSPNYG00000004476	pop1	100	71.209	ENSMALG00000012621	POP1	100	71.414	Monopterus_albus
ENSPNYG00000004476	pop1	95	47.391	MGP_CAROLIEiJ_G0019726	Pop1	89	47.363	Mus_caroli
ENSPNYG00000004476	pop1	95	47.919	ENSMUSG00000022325	Pop1	89	47.896	Mus_musculus
ENSPNYG00000004476	pop1	99	46.585	MGP_PahariEiJ_G0019735	Pop1	89	47.552	Mus_pahari
ENSPNYG00000004476	pop1	95	48.128	MGP_SPRETEiJ_G0020622	Pop1	89	48.108	Mus_spretus
ENSPNYG00000004476	pop1	95	49.466	ENSMPUG00000015250	POP1	89	49.244	Mustela_putorius_furo
ENSPNYG00000004476	pop1	97	46.042	ENSMLUG00000010204	POP1	89	46.363	Myotis_lucifugus
ENSPNYG00000004476	pop1	99	47.667	ENSNGAG00000001582	Pop1	89	48.918	Nannospalax_galili
ENSPNYG00000004476	pop1	100	93.661	ENSNBRG00000002356	pop1	100	93.661	Neolamprologus_brichardi
ENSPNYG00000004476	pop1	95	48.879	ENSNLEG00000002541	POP1	89	48.817	Nomascus_leucogenys
ENSPNYG00000004476	pop1	86	55.161	ENSMEUG00000003118	POP1	79	54.667	Notamacropus_eugenii
ENSPNYG00000004476	pop1	95	49.462	ENSOPRG00000007667	POP1	89	49.239	Ochotona_princeps
ENSPNYG00000004476	pop1	94	49.352	ENSODEG00000003984	POP1	89	49.352	Octodon_degus
ENSPNYG00000004476	pop1	100	89.206	ENSONIG00000016445	pop1	100	89.206	Oreochromis_niloticus
ENSPNYG00000004476	pop1	99	46.910	ENSOCUG00000017400	POP1	89	48.172	Oryctolagus_cuniculus
ENSPNYG00000004476	pop1	100	67.868	ENSORLG00000002839	pop1	100	67.662	Oryzias_latipes
ENSPNYG00000004476	pop1	100	66.840	ENSORLG00020022450	POP1	100	66.875	Oryzias_latipes_hni
ENSPNYG00000004476	pop1	100	68.107	ENSORLG00015012746	POP1	100	67.901	Oryzias_latipes_hsok
ENSPNYG00000004476	pop1	100	66.047	ENSOMEG00000006915	pop1	99	66.667	Oryzias_melastigma
ENSPNYG00000004476	pop1	97	47.795	ENSOGAG00000001466	POP1	89	48.707	Otolemur_garnettii
ENSPNYG00000004476	pop1	99	47.972	ENSPPAG00000018410	POP1	89	49.032	Pan_paniscus
ENSPNYG00000004476	pop1	97	47.664	ENSPPRG00000005002	POP1	89	48.268	Panthera_pardus
ENSPNYG00000004476	pop1	97	47.925	ENSPTIG00000016527	POP1	89	48.596	Panthera_tigris_altaica
ENSPNYG00000004476	pop1	99	48.073	ENSPTRG00000020458	POP1	89	49.140	Pan_troglodytes
ENSPNYG00000004476	pop1	95	48.669	ENSPANG00000009704	POP1	89	48.498	Papio_anubis
ENSPNYG00000004476	pop1	100	55.279	ENSPKIG00000016325	POP1	100	56.064	Paramormyrops_kingsleyae
ENSPNYG00000004476	pop1	95	50.054	ENSPSIG00000012343	POP1	88	50.110	Pelodiscus_sinensis
ENSPNYG00000004476	pop1	100	61.396	ENSPMGG00000022253	POP1	100	61.468	Periophthalmus_magnuspinnatus
ENSPNYG00000004476	pop1	98	46.579	ENSPEMG00000023633	Pop1	89	47.146	Peromyscus_maniculatus_bairdii
ENSPNYG00000004476	pop1	95	43.098	ENSPMAG00000003209	POP1	99	42.918	Petromyzon_marinus
ENSPNYG00000004476	pop1	95	47.284	ENSPCIG00000012216	POP1	88	46.788	Phascolarctos_cinereus
ENSPNYG00000004476	pop1	99	67.738	ENSPFOG00000012490	POP1	100	66.259	Poecilia_formosa
ENSPNYG00000004476	pop1	100	66.259	ENSPLAG00000004646	POP1	100	66.667	Poecilia_latipinna
ENSPNYG00000004476	pop1	100	66.155	ENSPMEG00000019592	POP1	100	66.735	Poecilia_mexicana
ENSPNYG00000004476	pop1	100	65.851	ENSPREG00000020951	POP1	100	66.429	Poecilia_reticulata
ENSPNYG00000004476	pop1	99	47.571	ENSPPYG00000018777	POP1	89	48.443	Pongo_abelii
ENSPNYG00000004476	pop1	97	46.010	ENSPCAG00000016662	POP1	89	46.328	Procavia_capensis
ENSPNYG00000004476	pop1	95	48.507	ENSPCOG00000019420	POP1	89	48.276	Propithecus_coquereli
ENSPNYG00000004476	pop1	95	48.453	ENSPVAG00000014468	POP1	89	48.439	Pteropus_vampyrus
ENSPNYG00000004476	pop1	100	53.823	ENSPNAG00000000265	pop1	100	53.625	Pygocentrus_nattereri
ENSPNYG00000004476	pop1	95	47.905	ENSRNOG00000005243	Pop1	89	47.883	Rattus_norvegicus
ENSPNYG00000004476	pop1	95	48.565	ENSRBIG00000007996	POP1	89	48.394	Rhinopithecus_bieti
ENSPNYG00000004476	pop1	95	48.565	ENSRROG00000012334	POP1	89	48.394	Rhinopithecus_roxellana
ENSPNYG00000004476	pop1	99	47.118	ENSSBOG00000020830	POP1	90	48.065	Saimiri_boliviensis_boliviensis
ENSPNYG00000004476	pop1	95	48.077	ENSSHAG00000000296	POP1	88	47.840	Sarcophilus_harrisii
ENSPNYG00000004476	pop1	100	56.968	ENSSFOG00015007429	pop1	99	56.663	Scleropages_formosus
ENSPNYG00000004476	pop1	100	73.899	ENSSMAG00000010467	POP1	100	73.927	Scophthalmus_maximus
ENSPNYG00000004476	pop1	100	71.746	ENSSDUG00000007817	POP1	100	73.030	Seriola_dumerili
ENSPNYG00000004476	pop1	100	72.020	ENSSLDG00000012565	POP1	100	73.434	Seriola_lalandi_dorsalis
ENSPNYG00000004476	pop1	95	46.336	ENSSPUG00000003550	-	89	46.187	Sphenodon_punctatus
ENSPNYG00000004476	pop1	100	75.761	ENSSPAG00000014955	pop1	100	75.866	Stegastes_partitus
ENSPNYG00000004476	pop1	97	48.796	ENSSSCG00000006078	POP1	89	49.236	Sus_scrofa
ENSPNYG00000004476	pop1	94	44.194	ENSTGUG00000012011	-	97	44.143	Taeniopygia_guttata
ENSPNYG00000004476	pop1	100	67.118	ENSTRUG00000010856	pop1	100	66.805	Takifugu_rubripes
ENSPNYG00000004476	pop1	95	66.237	ENSTNIG00000013297	pop1	95	66.304	Tetraodon_nigroviridis
ENSPNYG00000004476	pop1	99	45.243	ENSTBEG00000014214	POP1	93	46.228	Tupaia_belangeri
ENSPNYG00000004476	pop1	95	47.859	ENSTTRG00000016071	POP1	89	47.835	Tursiops_truncatus
ENSPNYG00000004476	pop1	98	47.708	ENSUAMG00000017309	POP1	93	48.482	Ursus_americanus
ENSPNYG00000004476	pop1	86	60.897	ENSUMAG00000016952	POP1	88	60.274	Ursus_maritimus
ENSPNYG00000004476	pop1	83	57.286	ENSVPAG00000008278	POP1	71	61.875	Vicugna_pacos
ENSPNYG00000004476	pop1	95	48.710	ENSVVUG00000010994	POP1	89	48.478	Vulpes_vulpes
ENSPNYG00000004476	pop1	100	61.128	ENSXCOG00000017043	POP1	100	61.026	Xiphophorus_couchianus
ENSPNYG00000004476	pop1	100	65.749	ENSXMAG00000002472	POP1	100	66.327	Xiphophorus_maculatus