EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000004533 (Gene tree)
Gene ID: 102211380
Gene Symbol: SMARCA2
Alias: wu:fa56c07|wu:fi27f11|zgc:66238
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 50696 bases
Position: chrJH419243.1:397136-447831
Accession: 102211380
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000006312	ResIII	PF04851.15	1.7e-08	1	1
ENSPNYP00000006604	ResIII	PF04851.15	1.7e-08	1	1
ENSPNYP00000006380	ResIII	PF04851.15	1.8e-08	1	1
ENSPNYP00000006562	ResIII	PF04851.15	3.5e-08	1	1
ENSPNYP00000006428	ResIII	PF04851.15	5.6e-08	1	1
ENSPNYP00000006604	BRK	PF07533.16	1.6e-17	1	1
ENSPNYP00000006562	BRK	PF07533.16	1.6e-17	1	1
ENSPNYP00000006428	BRK	PF07533.16	1.6e-17	1	1
ENSPNYP00000006312	BRK	PF07533.16	1.6e-17	1	1
ENSPNYP00000006380	BRK	PF07533.16	1.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000006539	SMARCA2-202	4737	-	ENSPNYP00000006380	1578 (aa)	-	-
ENSPNYT00000006587	SMARCA2-203	4728	-	ENSPNYP00000006428	1575 (aa)	-	-
ENSPNYT00000006768	SMARCA2-205	4674	-	ENSPNYP00000006604	1557 (aa)	-	-
ENSPNYT00000006725	SMARCA2-204	4680	-	ENSPNYP00000006562	1559 (aa)	-	-
ENSPNYT00000006777	SMARCA2-206	765	-	ENSPNYP00000006613	254 (aa)	-	-
ENSPNYT00000006470	SMARCA2-201	4680	XM_005730646	ENSPNYP00000006312	1559 (aa)	XP_005730703	-

Gene Model

Click here to download ENSPNYG00000004533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000004533's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000004533	SMARCA2	91	70.977	ENSPNYG00000023995	-	98	70.968
ENSPNYG00000004533	SMARCA2	93	71.600	ENSPNYG00000000717	smarca4a	95	72.115

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000004533	SMARCA2	97	76.918	ENSG00000080503	SMARCA2	99	98.000	Homo_sapiens
ENSPNYG00000004533	SMARCA2	100	90.245	ENSAPOG00000002641	SMARCA2	100	90.245	Acanthochromis_polyacanthus
ENSPNYG00000004533	SMARCA2	88	73.868	ENSAMEG00000012325	SMARCA2	99	82.473	Ailuropoda_melanoleuca
ENSPNYG00000004533	SMARCA2	100	90.428	ENSACIG00000015607	SMARCA2	100	90.290	Amphilophus_citrinellus
ENSPNYG00000004533	SMARCA2	100	90.446	ENSAOCG00000009647	-	100	90.446	Amphiprion_ocellaris
ENSPNYG00000004533	SMARCA2	100	90.497	ENSAPEG00000007646	SMARCA2	100	90.623	Amphiprion_percula
ENSPNYG00000004533	SMARCA2	99	89.618	ENSATEG00000006916	SMARCA2	99	89.457	Anabas_testudineus
ENSPNYG00000004533	SMARCA2	87	75.267	ENSAPLG00000013873	SMARCA2	93	75.192	Anas_platyrhynchos
ENSPNYG00000004533	SMARCA2	97	76.993	ENSACAG00000002423	SMARCA2	100	77.413	Anolis_carolinensis
ENSPNYG00000004533	SMARCA2	97	77.067	ENSANAG00000026498	SMARCA2	100	77.393	Aotus_nancymaae
ENSPNYG00000004533	SMARCA2	100	92.826	ENSACLG00000004248	SMARCA2	100	93.655	Astatotilapia_calliptera
ENSPNYG00000004533	SMARCA2	99	83.408	ENSAMXG00000012404	smarca2	100	83.031	Astyanax_mexicanus
ENSPNYG00000004533	SMARCA2	97	76.618	ENSBTAG00000007494	SMARCA2	100	77.981	Bos_taurus
ENSPNYG00000004533	SMARCA2	97	77.193	ENSCJAG00000010710	SMARCA2	100	76.735	Callithrix_jacchus
ENSPNYG00000004533	SMARCA2	97	77.951	ENSCAFG00000002013	SMARCA2	100	78.129	Canis_familiaris
ENSPNYG00000004533	SMARCA2	73	83.319	ENSCAFG00020026802	SMARCA2	94	83.233	Canis_lupus_dingo
ENSPNYG00000004533	SMARCA2	97	76.810	ENSCHIG00000025863	SMARCA2	100	77.981	Capra_hircus
ENSPNYG00000004533	SMARCA2	97	74.530	ENSTSYG00000003858	SMARCA2	100	75.913	Carlito_syrichta
ENSPNYG00000004533	SMARCA2	97	75.309	ENSCAPG00000002890	SMARCA2	99	74.728	Cavia_aperea
ENSPNYG00000004533	SMARCA2	97	76.773	ENSCPOG00000005475	SMARCA2	100	77.204	Cavia_porcellus
ENSPNYG00000004533	SMARCA2	97	77.211	ENSCCAG00000030636	SMARCA2	100	77.470	Cebus_capucinus
ENSPNYG00000004533	SMARCA2	97	75.639	ENSCATG00000031470	SMARCA2	100	77.130	Cercocebus_atys
ENSPNYG00000004533	SMARCA2	97	76.394	ENSCLAG00000014484	SMARCA2	100	77.087	Chinchilla_lanigera
ENSPNYG00000004533	SMARCA2	91	78.393	ENSCSAG00000008650	SMARCA2	99	78.398	Chlorocebus_sabaeus
ENSPNYG00000004533	SMARCA2	83	78.691	ENSCHOG00000004316	SMARCA2	86	78.799	Choloepus_hoffmanni
ENSPNYG00000004533	SMARCA2	97	78.525	ENSCPBG00000025463	SMARCA2	100	80.147	Chrysemys_picta_bellii
ENSPNYG00000004533	SMARCA2	97	77.296	ENSCANG00000039597	SMARCA2	100	77.478	Colobus_angolensis_palliatus
ENSPNYG00000004533	SMARCA2	96	71.383	ENSCGRG00001002323	Smarca2	100	72.103	Cricetulus_griseus_chok1gshd
ENSPNYG00000004533	SMARCA2	99	85.769	ENSCSEG00000019311	SMARCA2	99	86.535	Cynoglossus_semilaevis
ENSPNYG00000004533	SMARCA2	85	83.531	ENSCVAG00000016571	SMARCA2	98	84.731	Cyprinodon_variegatus
ENSPNYG00000004533	SMARCA2	100	82.704	ENSDARG00000008904	smarca2	100	82.201	Danio_rerio
ENSPNYG00000004533	SMARCA2	97	76.692	ENSDNOG00000006402	SMARCA2	100	77.520	Dasypus_novemcinctus
ENSPNYG00000004533	SMARCA2	97	76.824	ENSDORG00000014832	Smarca2	100	77.102	Dipodomys_ordii
ENSPNYG00000004533	SMARCA2	76	59.471	FBgn0000212	brm	92	48.109	Drosophila_melanogaster
ENSPNYG00000004533	SMARCA2	94	66.268	ENSEBUG00000011442	-	97	66.931	Eptatretus_burgeri
ENSPNYG00000004533	SMARCA2	84	60.132	ENSEBUG00000002449	-	93	61.550	Eptatretus_burgeri
ENSPNYG00000004533	SMARCA2	97	76.407	ENSEASG00005010312	SMARCA2	100	77.855	Equus_asinus_asinus
ENSPNYG00000004533	SMARCA2	61	88.235	ENSEEUG00000015540	-	69	82.192	Erinaceus_europaeus
ENSPNYG00000004533	SMARCA2	95	81.213	ENSELUG00000010318	smarca2	99	79.570	Esox_lucius
ENSPNYG00000004533	SMARCA2	97	77.756	ENSFCAG00000001568	SMARCA2	100	78.066	Felis_catus
ENSPNYG00000004533	SMARCA2	97	78.008	ENSFALG00000010416	SMARCA2	100	79.538	Ficedula_albicollis
ENSPNYG00000004533	SMARCA2	96	76.074	ENSFDAG00000010502	SMARCA2	100	74.923	Fukomys_damarensis
ENSPNYG00000004533	SMARCA2	100	88.889	ENSFHEG00000021250	SMARCA2	100	88.889	Fundulus_heteroclitus
ENSPNYG00000004533	SMARCA2	99	80.472	ENSGMOG00000014229	SMARCA2	99	80.153	Gadus_morhua
ENSPNYG00000004533	SMARCA2	97	78.331	ENSGALG00000010164	SMARCA2	100	78.058	Gallus_gallus
ENSPNYG00000004533	SMARCA2	95	80.708	ENSGAFG00000001164	SMARCA2	93	87.342	Gambusia_affinis
ENSPNYG00000004533	SMARCA2	99	85.814	ENSGACG00000014488	SMARCA2	99	85.433	Gasterosteus_aculeatus
ENSPNYG00000004533	SMARCA2	97	78.331	ENSGAGG00000024412	SMARCA2	100	78.121	Gopherus_agassizii
ENSPNYG00000004533	SMARCA2	97	72.988	ENSGGOG00000000513	SMARCA2	100	75.411	Gorilla_gorilla
ENSPNYG00000004533	SMARCA2	100	95.721	ENSHBUG00000006691	SMARCA2	100	95.721	Haplochromis_burtoni
ENSPNYG00000004533	SMARCA2	97	75.969	ENSHGLG00000005215	SMARCA2	100	76.131	Heterocephalus_glaber_female
ENSPNYG00000004533	SMARCA2	97	76.878	ENSHGLG00100010496	SMARCA2	100	77.107	Heterocephalus_glaber_male
ENSPNYG00000004533	SMARCA2	89	79.744	ENSHCOG00000015348	-	97	83.563	Hippocampus_comes
ENSPNYG00000004533	SMARCA2	99	81.639	ENSIPUG00000011060	smarca2	100	80.485	Ictalurus_punctatus
ENSPNYG00000004533	SMARCA2	97	76.611	ENSSTOG00000006812	SMARCA2	100	77.073	Ictidomys_tridecemlineatus
ENSPNYG00000004533	SMARCA2	97	75.810	ENSJJAG00000010867	Smarca2	100	77.456	Jaculus_jaculus
ENSPNYG00000004533	SMARCA2	100	89.027	ENSKMAG00000015844	-	100	88.965	Kryptolebias_marmoratus
ENSPNYG00000004533	SMARCA2	97	80.698	ENSLOCG00000011499	smarca2	99	80.453	Lepisosteus_oculatus
ENSPNYG00000004533	SMARCA2	97	76.215	ENSLAFG00000014061	SMARCA2	100	76.482	Loxodonta_africana
ENSPNYG00000004533	SMARCA2	95	75.476	ENSMFAG00000003814	SMARCA2	100	77.364	Macaca_fascicularis
ENSPNYG00000004533	SMARCA2	97	77.182	ENSMMUG00000015279	SMARCA2	100	77.367	Macaca_mulatta
ENSPNYG00000004533	SMARCA2	95	76.301	ENSMNEG00000041069	SMARCA2	100	76.957	Macaca_nemestrina
ENSPNYG00000004533	SMARCA2	88	80.384	ENSMLEG00000027418	SMARCA2	100	76.802	Mandrillus_leucophaeus
ENSPNYG00000004533	SMARCA2	100	88.682	ENSMAMG00000003056	SMARCA2	100	88.682	Mastacembelus_armatus
ENSPNYG00000004533	SMARCA2	100	95.658	ENSMZEG00005020709	SMARCA2	100	95.658	Maylandia_zebra
ENSPNYG00000004533	SMARCA2	74	62.616	ENSMGAG00000005160	-	100	61.823	Meleagris_gallopavo
ENSPNYG00000004533	SMARCA2	97	77.432	ENSMICG00000005162	SMARCA2	100	77.750	Microcebus_murinus
ENSPNYG00000004533	SMARCA2	97	76.968	ENSMOCG00000001611	Smarca2	100	77.247	Microtus_ochrogaster
ENSPNYG00000004533	SMARCA2	98	85.147	ENSMMOG00000014196	SMARCA2	99	85.147	Mola_mola
ENSPNYG00000004533	SMARCA2	96	78.389	ENSMODG00000003578	SMARCA2	100	78.184	Monodelphis_domestica
ENSPNYG00000004533	SMARCA2	99	86.815	ENSMALG00000009611	SMARCA2	99	86.869	Monopterus_albus
ENSPNYG00000004533	SMARCA2	83	80.909	MGP_CAROLIEiJ_G0022841	Smarca2	100	76.170	Mus_caroli
ENSPNYG00000004533	SMARCA2	95	75.539	ENSMUSG00000024921	Smarca2	99	98.000	Mus_musculus
ENSPNYG00000004533	SMARCA2	97	76.958	MGP_PahariEiJ_G0014334	Smarca2	100	76.500	Mus_pahari
ENSPNYG00000004533	SMARCA2	95	75.427	MGP_SPRETEiJ_G0023759	Smarca2	100	76.075	Mus_spretus
ENSPNYG00000004533	SMARCA2	80	82.045	ENSMPUG00000005171	SMARCA2	94	82.358	Mustela_putorius_furo
ENSPNYG00000004533	SMARCA2	97	73.087	ENSMLUG00000002342	SMARCA2	99	73.338	Myotis_lucifugus
ENSPNYG00000004533	SMARCA2	97	76.285	ENSNGAG00000000108	Smarca2	99	76.199	Nannospalax_galili
ENSPNYG00000004533	SMARCA2	88	97.368	ENSNBRG00000017998	SMARCA2	95	97.674	Neolamprologus_brichardi
ENSPNYG00000004533	SMARCA2	95	75.048	ENSNLEG00000008575	SMARCA2	100	76.675	Nomascus_leucogenys
ENSPNYG00000004533	SMARCA2	93	78.788	ENSMEUG00000009812	SMARCA2	100	72.330	Notamacropus_eugenii
ENSPNYG00000004533	SMARCA2	80	77.620	ENSOPRG00000013474	SMARCA2	100	73.241	Ochotona_princeps
ENSPNYG00000004533	SMARCA2	96	74.984	ENSODEG00000005452	SMARCA2	99	76.408	Octodon_degus
ENSPNYG00000004533	SMARCA2	99	93.359	ENSONIG00000014163	SMARCA2	99	93.612	Oreochromis_niloticus
ENSPNYG00000004533	SMARCA2	80	82.977	ENSOCUG00000006320	SMARCA2	100	77.401	Oryctolagus_cuniculus
ENSPNYG00000004533	SMARCA2	100	87.571	ENSORLG00000020820	SMARCA2	100	87.633	Oryzias_latipes
ENSPNYG00000004533	SMARCA2	100	87.751	ENSORLG00015006289	SMARCA2	100	87.814	Oryzias_latipes_hsok
ENSPNYG00000004533	SMARCA2	100	88.083	ENSOMEG00000009736	-	100	88.146	Oryzias_melastigma
ENSPNYG00000004533	SMARCA2	96	74.447	ENSOGAG00000017053	SMARCA2	99	76.088	Otolemur_garnettii
ENSPNYG00000004533	SMARCA2	97	75.512	ENSOARG00000013265	SMARCA2	100	77.281	Ovis_aries
ENSPNYG00000004533	SMARCA2	91	82.933	ENSPPAG00000038717	SMARCA2	100	76.359	Pan_paniscus
ENSPNYG00000004533	SMARCA2	97	77.821	ENSPPRG00000001879	SMARCA2	100	78.129	Panthera_pardus
ENSPNYG00000004533	SMARCA2	97	76.508	ENSPTRG00000051168	SMARCA2	100	76.971	Pan_troglodytes
ENSPNYG00000004533	SMARCA2	97	72.756	ENSPANG00000025121	SMARCA2	100	73.296	Papio_anubis
ENSPNYG00000004533	SMARCA2	100	81.772	ENSPKIG00000018469	-	100	81.456	Paramormyrops_kingsleyae
ENSPNYG00000004533	SMARCA2	96	78.105	ENSPSIG00000006284	SMARCA2	100	77.596	Pelodiscus_sinensis
ENSPNYG00000004533	SMARCA2	99	80.873	ENSPMGG00000013696	-	99	81.107	Periophthalmus_magnuspinnatus
ENSPNYG00000004533	SMARCA2	97	76.175	ENSPEMG00000019821	Smarca2	100	76.397	Peromyscus_maniculatus_bairdii
ENSPNYG00000004533	SMARCA2	94	68.566	ENSPMAG00000005337	-	97	68.133	Petromyzon_marinus
ENSPNYG00000004533	SMARCA2	97	78.202	ENSPCIG00000015658	SMARCA2	100	78.121	Phascolarctos_cinereus
ENSPNYG00000004533	SMARCA2	100	88.401	ENSPFOG00000001856	SMARCA2	100	88.150	Poecilia_formosa
ENSPNYG00000004533	SMARCA2	99	87.879	ENSPLAG00000017829	SMARCA2	97	87.750	Poecilia_latipinna
ENSPNYG00000004533	SMARCA2	99	87.808	ENSPMEG00000001815	-	99	87.808	Poecilia_mexicana
ENSPNYG00000004533	SMARCA2	100	87.554	ENSPREG00000013800	SMARCA2	100	87.554	Poecilia_reticulata
ENSPNYG00000004533	SMARCA2	97	75.540	ENSPPYG00000019258	SMARCA2	100	76.803	Pongo_abelii
ENSPNYG00000004533	SMARCA2	69	90.756	ENSPCAG00000016969	SMARCA2	69	90.756	Procavia_capensis
ENSPNYG00000004533	SMARCA2	97	75.406	ENSPCOG00000025709	SMARCA2	100	75.521	Propithecus_coquereli
ENSPNYG00000004533	SMARCA2	90	78.219	ENSPVAG00000000901	SMARCA2	94	78.696	Pteropus_vampyrus
ENSPNYG00000004533	SMARCA2	99	84.170	ENSPNAG00000014635	smarca2	98	84.107	Pygocentrus_nattereri
ENSPNYG00000004533	SMARCA2	97	75.825	ENSRNOG00000011931	Smarca2	100	75.649	Rattus_norvegicus
ENSPNYG00000004533	SMARCA2	95	76.240	ENSRBIG00000038618	SMARCA2	95	83.085	Rhinopithecus_bieti
ENSPNYG00000004533	SMARCA2	97	75.707	ENSRROG00000019271	SMARCA2	100	77.419	Rhinopithecus_roxellana
ENSPNYG00000004533	SMARCA2	92	82.334	ENSSBOG00000034827	SMARCA2	100	76.797	Saimiri_boliviensis_boliviensis
ENSPNYG00000004533	SMARCA2	96	78.193	ENSSHAG00000007884	SMARCA2	100	78.058	Sarcophilus_harrisii
ENSPNYG00000004533	SMARCA2	91	82.210	ENSSFOG00015014870	SMARCA2	97	83.345	Scleropages_formosus
ENSPNYG00000004533	SMARCA2	100	87.531	ENSSMAG00000013707	SMARCA2	100	88.155	Scophthalmus_maximus
ENSPNYG00000004533	SMARCA2	100	87.669	ENSSDUG00000008852	-	100	88.037	Seriola_dumerili
ENSPNYG00000004533	SMARCA2	99	84.915	ENSSLDG00000025449	SMARCA2	99	84.799	Seriola_lalandi_dorsalis
ENSPNYG00000004533	SMARCA2	81	93.598	ENSSARG00000007888	SMARCA2	84	77.483	Sorex_araneus
ENSPNYG00000004533	SMARCA2	95	75.512	ENSSPUG00000001629	SMARCA2	98	75.248	Sphenodon_punctatus
ENSPNYG00000004533	SMARCA2	100	90.881	ENSSPAG00000020091	-	100	90.818	Stegastes_partitus
ENSPNYG00000004533	SMARCA2	97	76.662	ENSSSCG00000005232	SMARCA2	100	77.981	Sus_scrofa
ENSPNYG00000004533	SMARCA2	97	77.814	ENSTGUG00000005460	SMARCA2	100	78.121	Taeniopygia_guttata
ENSPNYG00000004533	SMARCA2	99	85.813	ENSTRUG00000015619	SMARCA2	99	85.696	Takifugu_rubripes
ENSPNYG00000004533	SMARCA2	61	97.619	ENSTBEG00000008767	SMARCA2	70	97.619	Tupaia_belangeri
ENSPNYG00000004533	SMARCA2	92	77.110	ENSTTRG00000002033	SMARCA2	95	77.712	Tursiops_truncatus
ENSPNYG00000004533	SMARCA2	87	77.170	ENSUAMG00000024701	SMARCA2	99	77.147	Ursus_americanus
ENSPNYG00000004533	SMARCA2	88	87.535	ENSVPAG00000001204	SMARCA2	94	87.535	Vicugna_pacos
ENSPNYG00000004533	SMARCA2	73	82.990	ENSVVUG00000004598	SMARCA2	96	82.904	Vulpes_vulpes
ENSPNYG00000004533	SMARCA2	98	74.264	ENSXETG00000015299	smarca2	100	73.755	Xenopus_tropicalis
ENSPNYG00000004533	SMARCA2	89	85.046	ENSXCOG00000011073	SMARCA2	99	84.958	Xiphophorus_couchianus
ENSPNYG00000004533	SMARCA2	100	87.640	ENSXMAG00000015611	SMARCA2	100	87.640	Xiphophorus_maculatus