EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000004552 (Gene tree)
Gene ID: 102200822
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 8948 bases
Position: chrJH419236.1:1775772-1784719
Accession: 102200822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000005985	KH_1	PF00013.29	9.2e-68	1	4
ENSPNYP00000005985	KH_1	PF00013.29	9.2e-68	2	4
ENSPNYP00000005985	KH_1	PF00013.29	9.2e-68	3	4
ENSPNYP00000005985	KH_1	PF00013.29	9.2e-68	4	4
ENSPNYP00000005945	KH_1	PF00013.29	1.2e-67	1	4
ENSPNYP00000005945	KH_1	PF00013.29	1.2e-67	2	4
ENSPNYP00000005945	KH_1	PF00013.29	1.2e-67	3	4
ENSPNYP00000005945	KH_1	PF00013.29	1.2e-67	4	4
ENSPNYP00000005930	KH_1	PF00013.29	1.5e-67	1	4
ENSPNYP00000005930	KH_1	PF00013.29	1.5e-67	2	4
ENSPNYP00000005930	KH_1	PF00013.29	1.5e-67	3	4
ENSPNYP00000005930	KH_1	PF00013.29	1.5e-67	4	4
ENSPNYP00000005985	KH_2	PF07650.17	3e-21	1	2
ENSPNYP00000005985	KH_2	PF07650.17	3e-21	2	2
ENSPNYP00000005945	KH_2	PF07650.17	7.7e-21	1	2
ENSPNYP00000005945	KH_2	PF07650.17	7.7e-21	2	2
ENSPNYP00000005930	KH_2	PF07650.17	9.2e-21	1	2
ENSPNYP00000005930	KH_2	PF07650.17	9.2e-21	2	2
ENSPNYP00000005930	DUF1897	PF09005.10	1.9e-15	1	2
ENSPNYP00000005930	DUF1897	PF09005.10	1.9e-15	2	2
ENSPNYP00000005985	DUF1897	PF09005.10	2.1e-10	1	2
ENSPNYP00000005985	DUF1897	PF09005.10	2.1e-10	2	2
ENSPNYP00000005945	DUF1897	PF09005.10	7.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000006081	-	2125	XM_005729015	ENSPNYP00000005930	651 (aa)	XP_005729072	UPI0003AF4745
ENSPNYT00000006096	-	2050	XM_005729017	ENSPNYP00000005945	626 (aa)	XP_005729074	-
ENSPNYT00000006136	-	1794	-	ENSPNYP00000005985	597 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000004552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000004552's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000004552	fubp1	97	55.452	ENSPNYG00000014008	KHSRP	94	53.640
ENSPNYG00000004552	fubp1	97	49.500	ENSPNYG00000009567	fubp3	95	47.931
ENSPNYG00000004552	fubp1	50	36.364	ENSPNYG00000012326	pcbp3	64	34.722
ENSPNYG00000004552	fubp1	56	30.556	ENSPNYG00000004637	zgc:110045	67	30.556
ENSPNYG00000004552	fubp1	92	50.177	ENSPNYG00000013607	-	92	50.832
ENSPNYG00000004552	fubp1	99	55.007	ENSPNYG00000001374	khsrp	99	53.513
ENSPNYG00000004552	fubp1	62	42.857	ENSPNYG00000018792	pcbp2	89	42.857
ENSPNYG00000004552	fubp1	53	40.741	ENSPNYG00000013205	-	70	40.741
ENSPNYG00000004552	fubp1	61	30.128	ENSPNYG00000022740	igf2bp1	64	30.128
ENSPNYG00000004552	fubp1	62	42.424	ENSPNYG00000014206	PCBP2	90	42.424
ENSPNYG00000004552	fubp1	58	32.500	ENSPNYG00000020180	igf2bp3	65	32.121

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000004552	fubp1	73	78.194	ENSG00000162613	FUBP1	100	71.254	Homo_sapiens
ENSPNYG00000004552	fubp1	94	96.457	ENSAPOG00000014845	fubp1	92	96.457	Acanthochromis_polyacanthus
ENSPNYG00000004552	fubp1	73	74.633	ENSAMEG00000007372	FUBP1	100	68.981	Ailuropoda_melanoleuca
ENSPNYG00000004552	fubp1	100	90.394	ENSACIG00000020024	fubp1	100	90.394	Amphilophus_citrinellus
ENSPNYG00000004552	fubp1	100	91.943	ENSAPEG00000012232	fubp1	100	91.943	Amphiprion_percula
ENSPNYG00000004552	fubp1	100	97.248	ENSATEG00000018619	fubp1	100	97.248	Anabas_testudineus
ENSPNYG00000004552	fubp1	68	80.145	ENSAPLG00000005965	FUBP1	100	72.177	Anas_platyrhynchos
ENSPNYG00000004552	fubp1	73	74.630	ENSACAG00000006310	FUBP1	96	69.030	Anolis_carolinensis
ENSPNYG00000004552	fubp1	100	99.847	ENSACLG00000006708	fubp1	100	99.847	Astatotilapia_calliptera
ENSPNYG00000004552	fubp1	87	85.533	ENSAMXG00000005525	fubp1	99	84.398	Astyanax_mexicanus
ENSPNYG00000004552	fubp1	73	78.414	ENSCJAG00000007062	FUBP1	100	71.516	Callithrix_jacchus
ENSPNYG00000004552	fubp1	73	78.414	ENSCAFG00000020361	FUBP1	100	71.407	Canis_familiaris
ENSPNYG00000004552	fubp1	68	79.952	ENSTSYG00000000148	FUBP1	100	71.498	Carlito_syrichta
ENSPNYG00000004552	fubp1	57	84.677	ENSCAPG00000011052	-	65	84.677	Cavia_aperea
ENSPNYG00000004552	fubp1	73	78.414	ENSCPOG00000002757	FUBP1	98	71.189	Cavia_porcellus
ENSPNYG00000004552	fubp1	91	64.183	ENSCCAG00000036537	FUBP1	100	64.756	Cebus_capucinus
ENSPNYG00000004552	fubp1	73	78.194	ENSCATG00000042126	FUBP1	100	71.254	Cercocebus_atys
ENSPNYG00000004552	fubp1	73	78.414	ENSCLAG00000005621	FUBP1	100	72.152	Chinchilla_lanigera
ENSPNYG00000004552	fubp1	73	78.194	ENSCSAG00000001402	FUBP1	100	71.254	Chlorocebus_sabaeus
ENSPNYG00000004552	fubp1	73	78.194	ENSCHOG00000008177	FUBP1	98	71.516	Choloepus_hoffmanni
ENSPNYG00000004552	fubp1	73	79.510	ENSCGRG00001007103	Fubp1	100	71.779	Cricetulus_griseus_chok1gshd
ENSPNYG00000004552	fubp1	68	80.193	ENSCGRG00000003372	Fubp1	100	71.313	Cricetulus_griseus_crigri
ENSPNYG00000004552	fubp1	100	94.577	ENSCSEG00000021412	fubp1	98	93.939	Cynoglossus_semilaevis
ENSPNYG00000004552	fubp1	99	93.712	ENSCVAG00000014487	fubp1	99	94.325	Cyprinodon_variegatus
ENSPNYG00000004552	fubp1	100	82.171	ENSDARG00000029248	fubp1	100	83.358	Danio_rerio
ENSPNYG00000004552	fubp1	85	61.429	ENSDNOG00000034565	-	78	59.091	Dasypus_novemcinctus
ENSPNYG00000004552	fubp1	73	79.111	ENSDORG00000016534	Fubp1	98	71.363	Dipodomys_ordii
ENSPNYG00000004552	fubp1	78	78.070	ENSETEG00000000948	-	59	78.363	Echinops_telfairi
ENSPNYG00000004552	fubp1	70	74.074	ENSEBUG00000016143	fubp1	65	67.241	Eptatretus_burgeri
ENSPNYG00000004552	fubp1	75	82.770	ENSEEUG00000001287	FUBP1	87	71.869	Erinaceus_europaeus
ENSPNYG00000004552	fubp1	100	84.219	ENSELUG00000007990	fubp1	100	85.113	Esox_lucius
ENSPNYG00000004552	fubp1	73	78.936	ENSFALG00000005768	FUBP1	97	71.803	Ficedula_albicollis
ENSPNYG00000004552	fubp1	73	78.194	ENSFDAG00000014210	FUBP1	100	70.270	Fukomys_damarensis
ENSPNYG00000004552	fubp1	100	94.343	ENSFHEG00000005230	fubp1	100	94.954	Fundulus_heteroclitus
ENSPNYG00000004552	fubp1	100	86.278	ENSGMOG00000003370	fubp1	100	85.150	Gadus_morhua
ENSPNYG00000004552	fubp1	73	79.425	ENSGALG00000008939	FUBP1	100	72.393	Gallus_gallus
ENSPNYG00000004552	fubp1	100	92.932	ENSGAFG00000020972	fubp1	100	93.534	Gambusia_affinis
ENSPNYG00000004552	fubp1	100	89.828	ENSGACG00000016563	fubp1	100	90.297	Gasterosteus_aculeatus
ENSPNYG00000004552	fubp1	100	99.846	ENSHBUG00000009835	fubp1	100	99.846	Haplochromis_burtoni
ENSPNYG00000004552	fubp1	75	74.074	ENSHGLG00000002808	-	100	65.300	Heterocephalus_glaber_female
ENSPNYG00000004552	fubp1	73	78.414	ENSHGLG00000008415	-	100	72.152	Heterocephalus_glaber_female
ENSPNYG00000004552	fubp1	75	74.728	ENSHGLG00100001414	-	100	65.931	Heterocephalus_glaber_male
ENSPNYG00000004552	fubp1	73	78.414	ENSHGLG00100003417	-	100	71.537	Heterocephalus_glaber_male
ENSPNYG00000004552	fubp1	100	91.045	ENSHCOG00000000910	fubp1	100	91.783	Hippocampus_comes
ENSPNYG00000004552	fubp1	100	84.195	ENSIPUG00000009896	fubp1	100	84.650	Ictalurus_punctatus
ENSPNYG00000004552	fubp1	73	79.279	ENSSTOG00000014312	FUBP1	100	71.407	Ictidomys_tridecemlineatus
ENSPNYG00000004552	fubp1	73	79.642	ENSJJAG00000020069	Fubp1	100	71.779	Jaculus_jaculus
ENSPNYG00000004552	fubp1	100	93.760	ENSKMAG00000018897	fubp1	100	93.912	Kryptolebias_marmoratus
ENSPNYG00000004552	fubp1	99	92.537	ENSLBEG00000012700	fubp1	97	93.134	Labrus_bergylta
ENSPNYG00000004552	fubp1	98	80.902	ENSLOCG00000003745	fubp1	99	80.412	Lepisosteus_oculatus
ENSPNYG00000004552	fubp1	73	75.264	ENSLAFG00000003273	FUBP1	99	72.352	Loxodonta_africana
ENSPNYG00000004552	fubp1	73	78.194	ENSMFAG00000031825	FUBP1	100	71.363	Macaca_fascicularis
ENSPNYG00000004552	fubp1	73	79.054	ENSMMUG00000002899	FUBP1	100	71.254	Macaca_mulatta
ENSPNYG00000004552	fubp1	73	78.194	ENSMNEG00000045212	FUBP1	100	71.254	Macaca_nemestrina
ENSPNYG00000004552	fubp1	99	95.461	ENSMAMG00000007489	fubp1	99	95.461	Mastacembelus_armatus
ENSPNYG00000004552	fubp1	100	100.000	ENSMZEG00005024298	fubp1	100	100.000	Maylandia_zebra
ENSPNYG00000004552	fubp1	68	80.193	ENSMGAG00000009424	FUBP1	100	72.476	Meleagris_gallopavo
ENSPNYG00000004552	fubp1	73	78.634	ENSMAUG00000016428	Fubp1	98	71.494	Mesocricetus_auratus
ENSPNYG00000004552	fubp1	73	79.279	ENSMOCG00000014751	Fubp1	100	71.695	Microtus_ochrogaster
ENSPNYG00000004552	fubp1	87	94.333	ENSMMOG00000019463	fubp1	99	93.773	Mola_mola
ENSPNYG00000004552	fubp1	70	72.135	ENSMODG00000020804	FUBP1	100	66.823	Monodelphis_domestica
ENSPNYG00000004552	fubp1	100	96.325	ENSMALG00000015173	fubp1	100	96.325	Monopterus_albus
ENSPNYG00000004552	fubp1	73	78.889	MGP_CAROLIEiJ_G0025740	Fubp1	99	75.758	Mus_caroli
ENSPNYG00000004552	fubp1	73	78.667	ENSMUSG00000028034	Fubp1	99	75.568	Mus_musculus
ENSPNYG00000004552	fubp1	73	78.714	MGP_PahariEiJ_G0027191	Fubp1	99	75.614	Mus_pahari
ENSPNYG00000004552	fubp1	73	78.889	MGP_SPRETEiJ_G0026693	Fubp1	99	75.758	Mus_spretus
ENSPNYG00000004552	fubp1	73	74.477	ENSMLUG00000014802	FUBP1	100	68.971	Myotis_lucifugus
ENSPNYG00000004552	fubp1	73	75.724	ENSNGAG00000014302	Fubp1	100	68.865	Nannospalax_galili
ENSPNYG00000004552	fubp1	100	94.569	ENSNBRG00000015099	fubp1	100	94.569	Neolamprologus_brichardi
ENSPNYG00000004552	fubp1	73	74.561	ENSNLEG00000009772	FUBP1	100	69.785	Nomascus_leucogenys
ENSPNYG00000004552	fubp1	59	84.314	ENSMEUG00000007917	-	66	84.314	Notamacropus_eugenii
ENSPNYG00000004552	fubp1	89	69.914	ENSOPRG00000001175	FUBP1	98	60.522	Ochotona_princeps
ENSPNYG00000004552	fubp1	73	78.414	ENSODEG00000002600	-	100	70.270	Octodon_degus
ENSPNYG00000004552	fubp1	99	54.028	ENSODEG00000003657	-	99	51.981	Octodon_degus
ENSPNYG00000004552	fubp1	99	99.846	ENSONIG00000018381	fubp1	99	99.046	Oreochromis_niloticus
ENSPNYG00000004552	fubp1	60	81.137	ENSOANG00000009777	FUBP1	99	71.266	Ornithorhynchus_anatinus
ENSPNYG00000004552	fubp1	99	89.744	ENSORLG00000003540	fubp1	99	89.583	Oryzias_latipes
ENSPNYG00000004552	fubp1	100	92.694	ENSORLG00020005908	fubp1	96	93.151	Oryzias_latipes_hni
ENSPNYG00000004552	fubp1	100	93.313	ENSORLG00015008779	fubp1	100	92.891	Oryzias_latipes_hsok
ENSPNYG00000004552	fubp1	100	92.988	ENSOMEG00000021943	fubp1	97	93.445	Oryzias_melastigma
ENSPNYG00000004552	fubp1	70	74.327	ENSOGAG00000014233	FUBP1	100	68.722	Otolemur_garnettii
ENSPNYG00000004552	fubp1	73	78.366	ENSOARG00000013259	FUBP1	100	72.552	Ovis_aries
ENSPNYG00000004552	fubp1	73	78.414	ENSPPRG00000000413	FUBP1	100	71.407	Panthera_pardus
ENSPNYG00000004552	fubp1	73	78.414	ENSPTIG00000019450	FUBP1	100	71.407	Panthera_tigris_altaica
ENSPNYG00000004552	fubp1	69	79.048	ENSPSIG00000012965	FUBP1	100	71.498	Pelodiscus_sinensis
ENSPNYG00000004552	fubp1	99	83.491	ENSPMGG00000009060	fubp1	99	82.390	Periophthalmus_magnuspinnatus
ENSPNYG00000004552	fubp1	73	79.510	ENSPEMG00000021802	Fubp1	100	70.270	Peromyscus_maniculatus_bairdii
ENSPNYG00000004552	fubp1	65	60.262	ENSPMAG00000001644	-	93	60.699	Petromyzon_marinus
ENSPNYG00000004552	fubp1	100	94.801	ENSPFOG00000000238	fubp1	100	95.413	Poecilia_formosa
ENSPNYG00000004552	fubp1	100	92.504	ENSPLAG00000021170	fubp1	100	92.663	Poecilia_latipinna
ENSPNYG00000004552	fubp1	99	90.476	ENSPMEG00000004747	fubp1	99	96.656	Poecilia_mexicana
ENSPNYG00000004552	fubp1	100	94.648	ENSPREG00000017911	fubp1	100	95.260	Poecilia_reticulata
ENSPNYG00000004552	fubp1	75	77.586	ENSPPYG00000001219	-	68	78.901	Pongo_abelii
ENSPNYG00000004552	fubp1	73	78.366	ENSPCAG00000012617	FUBP1	98	71.319	Procavia_capensis
ENSPNYG00000004552	fubp1	73	79.065	ENSPCOG00000024974	FUBP1	100	71.407	Propithecus_coquereli
ENSPNYG00000004552	fubp1	73	72.247	ENSPVAG00000014637	FUBP1	98	67.075	Pteropus_vampyrus
ENSPNYG00000004552	fubp1	100	86.364	ENSPNAG00000016207	fubp1	100	86.212	Pygocentrus_nattereri
ENSPNYG00000004552	fubp1	73	78.842	ENSRNOG00000043370	Fubp1	100	71.626	Rattus_norvegicus
ENSPNYG00000004552	fubp1	73	78.194	ENSRBIG00000042950	FUBP1	100	71.254	Rhinopithecus_bieti
ENSPNYG00000004552	fubp1	73	78.194	ENSRROG00000043534	FUBP1	100	71.254	Rhinopithecus_roxellana
ENSPNYG00000004552	fubp1	73	78.414	ENSSBOG00000027299	FUBP1	100	71.407	Saimiri_boliviensis_boliviensis
ENSPNYG00000004552	fubp1	68	79.187	ENSSHAG00000005367	FUBP1	99	73.042	Sarcophilus_harrisii
ENSPNYG00000004552	fubp1	99	84.000	ENSSFOG00015010213	fubp1	99	84.462	Scleropages_formosus
ENSPNYG00000004552	fubp1	100	89.732	ENSSMAG00000012029	fubp1	98	89.583	Scophthalmus_maximus
ENSPNYG00000004552	fubp1	100	96.241	ENSSDUG00000007383	fubp1	98	96.241	Seriola_dumerili
ENSPNYG00000004552	fubp1	100	96.241	ENSSLDG00000022863	fubp1	98	96.241	Seriola_lalandi_dorsalis
ENSPNYG00000004552	fubp1	73	87.356	ENSSARG00000011730	FUBP1	56	88.372	Sorex_araneus
ENSPNYG00000004552	fubp1	99	69.048	ENSSPUG00000008389	FUBP1	100	67.677	Sphenodon_punctatus
ENSPNYG00000004552	fubp1	100	98.162	ENSSPAG00000010161	fubp1	100	98.162	Stegastes_partitus
ENSPNYG00000004552	fubp1	68	79.236	ENSTGUG00000006841	FUBP1	100	71.637	Taeniopygia_guttata
ENSPNYG00000004552	fubp1	100	89.217	ENSTRUG00000004615	fubp1	100	88.183	Takifugu_rubripes
ENSPNYG00000004552	fubp1	50	94.771	ENSTNIG00000019815	-	91	94.771	Tetraodon_nigroviridis
ENSPNYG00000004552	fubp1	80	82.738	ENSTBEG00000017333	FUBP1	64	88.690	Tupaia_belangeri
ENSPNYG00000004552	fubp1	73	78.414	ENSTTRG00000000096	FUBP1	98	71.210	Tursiops_truncatus
ENSPNYG00000004552	fubp1	73	78.414	ENSVPAG00000004709	FUBP1	99	71.210	Vicugna_pacos
ENSPNYG00000004552	fubp1	100	84.360	ENSXCOG00000019354	fubp1	100	83.123	Xiphophorus_couchianus
ENSPNYG00000004552	fubp1	92	96.321	ENSXMAG00000007168	fubp1	99	96.321	Xiphophorus_maculatus