EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000004649 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 2587 bases
Position: chrJH419835.1:2827-5413
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000006025	RRM_5	PF13893.6	6.6e-08	1	1
ENSPNYP00000006025	RRM_1	PF00076.22	6.2e-31	1	2
ENSPNYP00000006025	RRM_1	PF00076.22	6.2e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000006177	-	468	-	ENSPNYP00000006025	155 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000004649's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000004649's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000004649	-	50	31.250	ENSPNYG00000007657	srsf3b	59	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000004649	-	90	89.209	ENSAPOG00000012375	-	95	89.209	Acanthochromis_polyacanthus
ENSPNYG00000004649	-	100	84.810	ENSACIG00000016472	-	96	84.810	Amphilophus_citrinellus
ENSPNYG00000004649	-	90	90.647	ENSAOCG00000010907	-	95	90.647	Amphiprion_ocellaris
ENSPNYG00000004649	-	90	90.647	ENSAPEG00000009476	-	86	90.647	Amphiprion_percula
ENSPNYG00000004649	-	88	90.511	ENSATEG00000001912	-	90	90.511	Anabas_testudineus
ENSPNYG00000004649	-	94	57.931	ENSAMXG00000032121	rbm4.2	91	57.931	Astyanax_mexicanus
ENSPNYG00000004649	-	90	50.725	ENSCPBG00000023666	-	92	50.725	Chrysemys_picta_bellii
ENSPNYG00000004649	-	90	64.748	ENSCSEG00000007739	-	99	64.748	Cynoglossus_semilaevis
ENSPNYG00000004649	-	90	71.223	ENSDARG00000036386	rbm4.1	88	66.883	Danio_rerio
ENSPNYG00000004649	-	90	60.140	ENSEBUG00000007174	-	88	60.140	Eptatretus_burgeri
ENSPNYG00000004649	-	90	82.014	ENSFHEG00000003483	-	91	82.014	Fundulus_heteroclitus
ENSPNYG00000004649	-	90	79.856	ENSGAFG00000019301	-	91	79.856	Gambusia_affinis
ENSPNYG00000004649	-	90	50.725	ENSGAGG00000014558	-	92	50.725	Gopherus_agassizii
ENSPNYG00000004649	-	99	100.000	ENSHBUG00000011624	-	100	100.000	Haplochromis_burtoni
ENSPNYG00000004649	-	95	76.623	ENSHCOG00000011413	-	91	76.623	Hippocampus_comes
ENSPNYG00000004649	-	90	88.406	ENSLBEG00000019756	-	86	88.406	Labrus_bergylta
ENSPNYG00000004649	-	90	53.571	ENSLACG00000006343	zgc:77262	52	53.571	Latimeria_chalumnae
ENSPNYG00000004649	-	91	62.411	ENSLOCG00000002772	rbm4.1	95	62.411	Lepisosteus_oculatus
ENSPNYG00000004649	-	90	52.518	ENSMZEG00005028161	-	77	52.518	Maylandia_zebra
ENSPNYG00000004649	-	90	100.000	ENSMZEG00005028160	-	93	100.000	Maylandia_zebra
ENSPNYG00000004649	-	94	89.655	ENSMZEG00005009210	-	81	89.655	Maylandia_zebra
ENSPNYG00000004649	-	90	86.232	ENSMMOG00000020484	-	86	86.232	Mola_mola
ENSPNYG00000004649	-	100	99.355	ENSNBRG00000017763	-	100	99.355	Neolamprologus_brichardi
ENSPNYG00000004649	-	90	69.565	ENSPKIG00000020805	rbm4.1	85	69.565	Paramormyrops_kingsleyae
ENSPNYG00000004649	-	90	65.468	ENSPMGG00000004331	rbm4.1	93	65.468	Periophthalmus_magnuspinnatus
ENSPNYG00000004649	-	90	56.835	ENSPMAG00000003433	rbm4.2	69	56.835	Petromyzon_marinus
ENSPNYG00000004649	-	90	80.435	ENSPLAG00000018569	-	88	80.435	Poecilia_latipinna
ENSPNYG00000004649	-	90	80.435	ENSPMEG00000006278	-	88	80.435	Poecilia_mexicana
ENSPNYG00000004649	-	95	49.333	ENSSFOG00015018567	zgc:77262	99	49.333	Scleropages_formosus
ENSPNYG00000004649	-	94	83.108	ENSSMAG00000007575	-	95	83.108	Scophthalmus_maximus
ENSPNYG00000004649	-	90	79.856	ENSXCOG00000003730	-	86	79.856	Xiphophorus_couchianus