EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000004673 (Gene tree)
Gene ID: 102203335
Gene Symbol: sf1
Alias: wu:fc09f06|znf162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 12745 bases
Position: chrJH419835.1:12496-25240
Accession: 102203335
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000006057	KH_1	PF00013.29	3.4e-06	1	1
ENSPNYP00000006057	zf-CCHC	PF00098.23	0.00047	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000006209	-	2913	XM_013907942	ENSPNYP00000006057	680 (aa)	XP_013763396	UPI0006AB1C94

Gene Model

Click here to download ENSPNYG00000004673's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000004673's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000004673	sf1	97	92.760	ENSAPOG00000012341	sf1	67	92.763	Acanthochromis_polyacanthus
ENSPNYG00000004673	sf1	100	91.056	ENSACIG00000016514	sf1	100	91.056	Amphilophus_citrinellus
ENSPNYG00000004673	sf1	97	93.051	ENSAOCG00000010934	sf1	67	92.982	Amphiprion_ocellaris
ENSPNYG00000004673	sf1	97	93.051	ENSAPEG00000009498	sf1	67	92.982	Amphiprion_percula
ENSPNYG00000004673	sf1	67	90.789	ENSATEG00000001894	sf1	67	91.466	Anabas_testudineus
ENSPNYG00000004673	sf1	84	66.121	ENSANAG00000022607	-	88	73.995	Aotus_nancymaae
ENSPNYG00000004673	sf1	59	78.520	ENSANAG00000026664	-	89	82.632	Aotus_nancymaae
ENSPNYG00000004673	sf1	100	94.420	ENSACLG00000007633	sf1	100	94.420	Astatotilapia_calliptera
ENSPNYG00000004673	sf1	67	83.878	ENSAMXG00000003630	sf1	59	84.026	Astyanax_mexicanus
ENSPNYG00000004673	sf1	59	78.199	ENSBTAG00000001035	SF1	61	82.632	Bos_taurus
ENSPNYG00000004673	sf1	59	78.199	ENSCJAG00000002780	SF1	75	67.961	Callithrix_jacchus
ENSPNYG00000004673	sf1	59	78.199	ENSCAFG00000014239	SF1	58	82.368	Canis_familiaris
ENSPNYG00000004673	sf1	59	78.199	ENSCAFG00020014381	SF1	58	82.632	Canis_lupus_dingo
ENSPNYG00000004673	sf1	59	78.199	ENSCHIG00000025867	SF1	58	82.632	Capra_hircus
ENSPNYG00000004673	sf1	59	78.657	ENSCAPG00000010762	SF1	65	83.467	Cavia_aperea
ENSPNYG00000004673	sf1	59	78.199	ENSCCAG00000037881	SF1	89	82.632	Cebus_capucinus
ENSPNYG00000004673	sf1	59	71.359	ENSCCAG00000023781	-	82	72.895	Cebus_capucinus
ENSPNYG00000004673	sf1	59	78.199	ENSCATG00000011564	SF1	89	82.632	Cercocebus_atys
ENSPNYG00000004673	sf1	56	73.134	ENSCHOG00000006008	SF1	66	76.944	Choloepus_hoffmanni
ENSPNYG00000004673	sf1	60	55.792	ENSCING00000005564	-	92	53.419	Ciona_intestinalis
ENSPNYG00000004673	sf1	58	52.983	ENSCSAVG00000009055	-	72	61.238	Ciona_savignyi
ENSPNYG00000004673	sf1	59	78.199	ENSCANG00000042201	SF1	89	82.632	Colobus_angolensis_palliatus
ENSPNYG00000004673	sf1	59	78.436	ENSCGRG00001003677	Sf1	65	83.158	Cricetulus_griseus_chok1gshd
ENSPNYG00000004673	sf1	59	76.832	ENSCGRG00000001708	Sf1	65	83.467	Cricetulus_griseus_crigri
ENSPNYG00000004673	sf1	98	88.421	ENSCSEG00000014375	sf1	65	88.235	Cynoglossus_semilaevis
ENSPNYG00000004673	sf1	98	90.240	ENSCVAG00000001670	sf1	67	91.429	Cyprinodon_variegatus
ENSPNYG00000004673	sf1	84	83.595	ENSDARG00000008188	sf1	65	91.599	Danio_rerio
ENSPNYG00000004673	sf1	59	78.199	ENSDORG00000016334	Sf1	58	82.632	Dipodomys_ordii
ENSPNYG00000004673	sf1	59	72.705	ENSETEG00000012830	SF1	51	75.881	Echinops_telfairi
ENSPNYG00000004673	sf1	100	47.442	ENSEBUG00000012728	sf1	61	56.962	Eptatretus_burgeri
ENSPNYG00000004673	sf1	53	77.719	ENSEEUG00000001058	SF1	83	82.985	Erinaceus_europaeus
ENSPNYG00000004673	sf1	78	79.221	ENSELUG00000013225	sf1	60	84.665	Esox_lucius
ENSPNYG00000004673	sf1	59	78.199	ENSFCAG00000012231	SF1	75	68.932	Felis_catus
ENSPNYG00000004673	sf1	59	78.417	ENSFDAG00000009833	SF1	65	82.933	Fukomys_damarensis
ENSPNYG00000004673	sf1	67	89.497	ENSFHEG00000022656	sf1	67	89.497	Fundulus_heteroclitus
ENSPNYG00000004673	sf1	71	77.433	ENSGMOG00000007469	sf1	61	94.595	Gadus_morhua
ENSPNYG00000004673	sf1	89	88.670	ENSGAFG00000019284	sf1	74	90.110	Gambusia_affinis
ENSPNYG00000004673	sf1	62	80.796	ENSGAGG00000021691	SF1	68	69.960	Gopherus_agassizii
ENSPNYG00000004673	sf1	100	99.559	ENSHBUG00000011598	sf1	100	99.559	Haplochromis_burtoni
ENSPNYG00000004673	sf1	59	78.199	ENSHGLG00000009541	SF1	65	82.632	Heterocephalus_glaber_female
ENSPNYG00000004673	sf1	55	71.463	ENSHGLG00100008255	-	70	77.841	Heterocephalus_glaber_male
ENSPNYG00000004673	sf1	59	78.417	ENSHGLG00100013879	-	65	82.933	Heterocephalus_glaber_male
ENSPNYG00000004673	sf1	70	85.865	ENSHCOG00000011388	sf1	68	87.939	Hippocampus_comes
ENSPNYG00000004673	sf1	59	78.417	ENSSTOG00000009790	-	58	82.933	Ictidomys_tridecemlineatus
ENSPNYG00000004673	sf1	55	70.390	ENSSTOG00000024353	-	68	71.907	Ictidomys_tridecemlineatus
ENSPNYG00000004673	sf1	59	78.436	ENSJJAG00000011788	Sf1	58	82.895	Jaculus_jaculus
ENSPNYG00000004673	sf1	67	89.107	ENSKMAG00000005854	sf1	70	88.403	Kryptolebias_marmoratus
ENSPNYG00000004673	sf1	83	88.147	ENSLBEG00000019836	sf1	72	88.937	Labrus_bergylta
ENSPNYG00000004673	sf1	60	78.345	ENSLACG00000018493	SF1	67	79.570	Latimeria_chalumnae
ENSPNYG00000004673	sf1	67	79.915	ENSLOCG00000002130	sf1	72	80.384	Lepisosteus_oculatus
ENSPNYG00000004673	sf1	59	80.482	ENSLAFG00000007201	SF1	63	84.043	Loxodonta_africana
ENSPNYG00000004673	sf1	59	78.199	ENSMFAG00000033122	SF1	89	82.632	Macaca_fascicularis
ENSPNYG00000004673	sf1	61	77.262	ENSMMUG00000022606	SF1	90	82.368	Macaca_mulatta
ENSPNYG00000004673	sf1	59	78.199	ENSMNEG00000037901	SF1	89	82.632	Macaca_nemestrina
ENSPNYG00000004673	sf1	59	77.962	ENSMLEG00000040706	SF1	89	82.415	Mandrillus_leucophaeus
ENSPNYG00000004673	sf1	67	93.421	ENSMAMG00000001780	sf1	67	93.435	Mastacembelus_armatus
ENSPNYG00000004673	sf1	100	99.706	ENSMZEG00005009196	sf1	100	99.706	Maylandia_zebra
ENSPNYG00000004673	sf1	59	76.869	ENSMAUG00000014064	Sf1	65	83.158	Mesocricetus_auratus
ENSPNYG00000004673	sf1	59	78.199	ENSMICG00000001202	SF1	89	82.415	Microcebus_murinus
ENSPNYG00000004673	sf1	59	78.199	ENSMOCG00000022038	Sf1	65	83.158	Microtus_ochrogaster
ENSPNYG00000004673	sf1	67	88.816	ENSMMOG00000020474	sf1	67	88.621	Mola_mola
ENSPNYG00000004673	sf1	59	76.923	ENSMODG00000029407	SF1	80	83.158	Monodelphis_domestica
ENSPNYG00000004673	sf1	67	86.404	ENSMALG00000020521	sf1	73	86.433	Monopterus_albus
ENSPNYG00000004673	sf1	59	78.436	MGP_CAROLIEiJ_G0022607	Sf1	99	95.489	Mus_caroli
ENSPNYG00000004673	sf1	59	78.436	ENSMUSG00000024949	Sf1	99	95.489	Mus_musculus
ENSPNYG00000004673	sf1	59	78.436	MGP_PahariEiJ_G0014101	Sf1	99	95.489	Mus_pahari
ENSPNYG00000004673	sf1	59	78.436	MGP_SPRETEiJ_G0023518	Sf1	99	95.489	Mus_spretus
ENSPNYG00000004673	sf1	59	76.636	ENSMPUG00000012684	SF1	58	82.632	Mustela_putorius_furo
ENSPNYG00000004673	sf1	63	73.836	ENSMLUG00000029800	-	64	78.947	Myotis_lucifugus
ENSPNYG00000004673	sf1	59	76.869	ENSMLUG00000015217	-	58	82.632	Myotis_lucifugus
ENSPNYG00000004673	sf1	59	78.436	ENSNGAG00000005550	Sf1	65	82.895	Nannospalax_galili
ENSPNYG00000004673	sf1	100	93.979	ENSNBRG00000017606	sf1	100	93.979	Neolamprologus_brichardi
ENSPNYG00000004673	sf1	59	78.436	ENSNLEG00000005236	-	89	82.632	Nomascus_leucogenys
ENSPNYG00000004673	sf1	58	77.381	ENSMEUG00000013424	SF1	69	83.333	Notamacropus_eugenii
ENSPNYG00000004673	sf1	100	99.412	ENSONIG00000015728	sf1	100	99.412	Oreochromis_niloticus
ENSPNYG00000004673	sf1	59	78.199	ENSOCUG00000026486	SF1	59	82.368	Oryctolagus_cuniculus
ENSPNYG00000004673	sf1	69	87.768	ENSORLG00000011853	sf1	66	88.767	Oryzias_latipes
ENSPNYG00000004673	sf1	69	88.197	ENSORLG00020011834	sf1	66	89.207	Oryzias_latipes_hni
ENSPNYG00000004673	sf1	67	87.746	ENSORLG00015012855	sf1	66	88.326	Oryzias_latipes_hsok
ENSPNYG00000004673	sf1	67	89.956	ENSOMEG00000005210	sf1	67	90.549	Oryzias_melastigma
ENSPNYG00000004673	sf1	59	78.199	ENSOGAG00000016196	SF1	58	82.368	Otolemur_garnettii
ENSPNYG00000004673	sf1	59	78.199	ENSOARG00000009166	SF1	65	82.368	Ovis_aries
ENSPNYG00000004673	sf1	59	79.376	ENSPPAG00000002799	-	90	82.632	Pan_paniscus
ENSPNYG00000004673	sf1	59	78.417	ENSPPRG00000013566	SF1	58	83.978	Panthera_pardus
ENSPNYG00000004673	sf1	59	78.199	ENSPTIG00000016141	SF1	67	82.632	Panthera_tigris_altaica
ENSPNYG00000004673	sf1	59	79.286	ENSPTRG00000003846	SF1	89	82.632	Pan_troglodytes
ENSPNYG00000004673	sf1	59	77.962	ENSPANG00000020754	SF1	89	82.632	Papio_anubis
ENSPNYG00000004673	sf1	60	76.389	ENSPEMG00000010463	Sf1	65	83.158	Peromyscus_maniculatus_bairdii
ENSPNYG00000004673	sf1	59	78.282	ENSPCIG00000018173	SF1	60	82.895	Phascolarctos_cinereus
ENSPNYG00000004673	sf1	97	89.728	ENSPFOG00000013683	sf1	67	90.549	Poecilia_formosa
ENSPNYG00000004673	sf1	90	89.123	ENSPLAG00000018076	sf1	62	89.976	Poecilia_latipinna
ENSPNYG00000004673	sf1	97	89.728	ENSPMEG00000005726	sf1	67	90.549	Poecilia_mexicana
ENSPNYG00000004673	sf1	97	89.426	ENSPREG00000004155	sf1	67	89.890	Poecilia_reticulata
ENSPNYG00000004673	sf1	59	78.199	ENSPPYG00000003098	-	70	82.368	Pongo_abelii
ENSPNYG00000004673	sf1	59	77.725	ENSPCAG00000013631	SF1	75	66.667	Procavia_capensis
ENSPNYG00000004673	sf1	59	78.199	ENSPCOG00000027546	SF1	89	82.415	Propithecus_coquereli
ENSPNYG00000004673	sf1	59	76.869	ENSPVAG00000016938	SF1	75	68.775	Pteropus_vampyrus
ENSPNYG00000004673	sf1	67	83.478	ENSPNAG00000013072	sf1	67	83.772	Pygocentrus_nattereri
ENSPNYG00000004673	sf1	59	78.436	ENSRNOG00000021085	Sf1	58	83.158	Rattus_norvegicus
ENSPNYG00000004673	sf1	59	78.199	ENSRBIG00000042818	SF1	89	82.632	Rhinopithecus_bieti
ENSPNYG00000004673	sf1	60	77.336	ENSRROG00000045655	SF1	90	82.415	Rhinopithecus_roxellana
ENSPNYG00000004673	sf1	80	65.749	ENSSBOG00000022267	-	84	72.779	Saimiri_boliviensis_boliviensis
ENSPNYG00000004673	sf1	70	72.577	ENSSHAG00000006841	SF1	68	84.987	Sarcophilus_harrisii
ENSPNYG00000004673	sf1	71	80.493	ENSSFOG00015021978	sf1	66	80.435	Scleropages_formosus
ENSPNYG00000004673	sf1	84	87.435	ENSSMAG00000007549	sf1	70	89.107	Scophthalmus_maximus
ENSPNYG00000004673	sf1	67	91.685	ENSSDUG00000003903	sf1	70	93.231	Seriola_dumerili
ENSPNYG00000004673	sf1	59	73.621	ENSSARG00000008180	SF1	71	77.867	Sorex_araneus
ENSPNYG00000004673	sf1	59	79.953	ENSSPUG00000012907	SF1	58	85.634	Sphenodon_punctatus
ENSPNYG00000004673	sf1	97	93.505	ENSSPAG00000019060	sf1	67	93.860	Stegastes_partitus
ENSPNYG00000004673	sf1	59	76.869	ENSSSCG00000013021	SF1	58	82.632	Sus_scrofa
ENSPNYG00000004673	sf1	72	72.180	ENSTNIG00000004820	sf1	72	77.892	Tetraodon_nigroviridis
ENSPNYG00000004673	sf1	59	73.580	ENSTBEG00000013133	SF1	62	66.452	Tupaia_belangeri
ENSPNYG00000004673	sf1	59	80.723	ENSUMAG00000007268	SF1	69	82.632	Ursus_maritimus
ENSPNYG00000004673	sf1	85	72.326	ENSXETG00000008434	sf1	62	85.675	Xenopus_tropicalis
ENSPNYG00000004673	sf1	71	86.948	ENSXCOG00000003704	sf1	69	92.857	Xiphophorus_couchianus
ENSPNYG00000004673	sf1	97	89.275	ENSXMAG00000007822	sf1	70	90.570	Xiphophorus_maculatus