EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000004681 (Gene tree)
Gene ID: 102195105
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 6759 bases
Position: chrJH419250.1:3046966-3053724
Accession: 102195105
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000006089	MMR_HSR1	PF01926.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000006241	-	2585	XM_005732086	ENSPNYP00000006089	200 (aa)	XP_005732143	UPI0003AFAF86

Gene Model

Click here to download ENSPNYG00000004681's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000004681's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000004681	-	86	56.725	ENSPNYG00000022091	RAB15	81	56.725
ENSPNYG00000004681	-	73	44.371	ENSPNYG00000003511	-	63	44.371
ENSPNYG00000004681	-	98	53.465	ENSPNYG00000009172	rab1ab	98	53.465
ENSPNYG00000004681	-	84	44.910	ENSPNYG00000005326	-	78	44.910
ENSPNYG00000004681	-	56	36.283	ENSPNYG00000007565	RAP2B	94	36.800
ENSPNYG00000004681	-	75	30.263	ENSPNYG00000009889	-	79	30.065
ENSPNYG00000004681	-	92	44.041	ENSPNYG00000019611	-	89	44.041
ENSPNYG00000004681	-	86	32.370	ENSPNYG00000004845	rabl2	74	32.370
ENSPNYG00000004681	-	81	41.317	ENSPNYG00000015328	RAB9A	76	41.317
ENSPNYG00000004681	-	88	51.977	ENSPNYG00000023905	rab12	71	51.744
ENSPNYG00000004681	-	84	42.012	ENSPNYG00000010325	rab42a	64	42.012
ENSPNYG00000004681	-	92	47.027	ENSPNYG00000008498	-	82	47.027
ENSPNYG00000004681	-	92	38.587	ENSPNYG00000023810	-	85	38.587
ENSPNYG00000004681	-	99	47.525	ENSPNYG00000007156	rab35b	100	48.515
ENSPNYG00000004681	-	89	46.774	ENSPNYG00000009728	rab30	85	46.774
ENSPNYG00000004681	-	81	38.037	ENSPNYG00000011135	RAB17	71	38.037
ENSPNYG00000004681	-	82	39.645	ENSPNYG00000008014	rab32b	78	39.645
ENSPNYG00000004681	-	77	35.714	ENSPNYG00000001744	rhebl1	83	35.714
ENSPNYG00000004681	-	84	47.024	ENSPNYG00000012426	rab2a	79	47.024
ENSPNYG00000004681	-	97	52.000	ENSPNYG00000010377	rab1ba	98	52.000
ENSPNYG00000004681	-	84	44.311	ENSPNYG00000007314	-	78	44.311
ENSPNYG00000004681	-	85	37.278	ENSPNYG00000019639	rab23	81	37.725
ENSPNYG00000004681	-	79	43.671	ENSPNYG00000010491	rab25a	75	43.671
ENSPNYG00000004681	-	90	37.566	ENSPNYG00000005809	-	91	37.566
ENSPNYG00000004681	-	96	35.714	ENSPNYG00000018613	si:dkey-13a21.4	95	35.714
ENSPNYG00000004681	-	79	37.500	ENSPNYG00000017153	rab34b	83	38.514
ENSPNYG00000004681	-	96	42.714	ENSPNYG00000018214	rab25b	95	42.857
ENSPNYG00000004681	-	69	31.884	ENSPNYG00000003962	arl3	72	31.884
ENSPNYG00000004681	-	87	41.954	ENSPNYG00000015851	-	88	38.974
ENSPNYG00000004681	-	92	44.041	ENSPNYG00000004098	rab11bb	89	44.041
ENSPNYG00000004681	-	83	31.361	ENSPNYG00000016378	-	78	31.361
ENSPNYG00000004681	-	86	34.857	ENSPNYG00000006192	rheb	92	34.857
ENSPNYG00000004681	-	97	44.059	ENSPNYG00000018244	rab11al	94	44.059
ENSPNYG00000004681	-	89	55.618	ENSPNYG00000007520	-	84	55.618
ENSPNYG00000004681	-	85	38.286	ENSPNYG00000000233	rab9b	78	38.286
ENSPNYG00000004681	-	79	44.304	ENSPNYG00000013288	rab41	75	44.304
ENSPNYG00000004681	-	88	51.977	ENSPNYG00000005654	rab12	71	51.744
ENSPNYG00000004681	-	94	36.765	ENSPNYG00000017514	rab34a	78	36.765
ENSPNYG00000004681	-	85	49.412	ENSPNYG00000009490	si:dkey-16l2.16	81	49.412
ENSPNYG00000004681	-	88	54.857	ENSPNYG00000000512	rab15	82	54.857
ENSPNYG00000004681	-	85	39.344	ENSPNYG00000013054	rab33ba	75	39.344
ENSPNYG00000004681	-	85	45.930	ENSPNYG00000019276	-	81	45.930
ENSPNYG00000004681	-	94	41.837	ENSPNYG00000000044	rab33a	82	41.837
ENSPNYG00000004681	-	82	46.951	ENSPNYG00000007064	rab18a	80	46.951
ENSPNYG00000004681	-	88	37.989	ENSPNYG00000020409	RAB7A	86	37.989
ENSPNYG00000004681	-	84	42.775	ENSPNYG00000019963	rab6ba	91	42.775
ENSPNYG00000004681	-	97	41.463	ENSPNYG00000002252	rab11a	95	41.463
ENSPNYG00000004681	-	84	37.059	ENSPNYG00000005416	si:ch73-116o1.2	81	37.059
ENSPNYG00000004681	-	86	39.665	ENSPNYG00000015355	RAB29	86	39.665
ENSPNYG00000004681	-	81	32.370	ENSPNYG00000017665	rasl11a	67	32.370
ENSPNYG00000004681	-	95	42.640	ENSPNYG00000001751	rab18b	93	42.640
ENSPNYG00000004681	-	96	33.854	ENSPNYG00000015124	hrasb	98	33.854
ENSPNYG00000004681	-	82	32.749	ENSPNYG00000011286	rasl11b	79	33.166
ENSPNYG00000004681	-	76	46.053	ENSPNYG00000010861	rab6bb	76	46.053
ENSPNYG00000004681	-	79	45.570	ENSPNYG00000020556	rab6a	76	45.570
ENSPNYG00000004681	-	99	54.040	ENSPNYG00000015841	-	96	54.040
ENSPNYG00000004681	-	81	41.615	ENSPNYG00000010615	rab5c	80	40.000
ENSPNYG00000004681	-	95	39.062	ENSPNYG00000010612	rab5aa	89	39.062
ENSPNYG00000004681	-	81	37.037	ENSPNYG00000013814	KRAS	98	33.679
ENSPNYG00000004681	-	86	45.087	ENSPNYG00000015774	RAB39B	81	45.087
ENSPNYG00000004681	-	80	44.512	ENSPNYG00000012922	zgc:101559	70	44.512
ENSPNYG00000004681	-	92	44.041	ENSPNYG00000019644	rab11ba	89	44.041

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000004681	-	100	95.500	ENSAPOG00000001040	-	100	95.500	Acanthochromis_polyacanthus
ENSPNYG00000004681	-	100	67.164	ENSACIG00000003157	-	100	67.164	Amphilophus_citrinellus
ENSPNYG00000004681	-	100	95.500	ENSAOCG00000015908	-	100	95.500	Amphiprion_ocellaris
ENSPNYG00000004681	-	100	95.500	ENSAPEG00000004121	-	100	95.500	Amphiprion_percula
ENSPNYG00000004681	-	100	90.500	ENSATEG00000023662	-	100	90.500	Anabas_testudineus
ENSPNYG00000004681	-	100	98.500	ENSACLG00000019643	-	100	98.500	Astatotilapia_calliptera
ENSPNYG00000004681	-	100	92.000	ENSCVAG00000022649	-	100	92.000	Cyprinodon_variegatus
ENSPNYG00000004681	-	86	73.837	ENSDARG00000103934	megf8	99	73.837	Danio_rerio
ENSPNYG00000004681	-	100	90.500	ENSGAFG00000014787	-	100	90.500	Gambusia_affinis
ENSPNYG00000004681	-	100	99.000	ENSHBUG00000003728	-	100	99.000	Haplochromis_burtoni
ENSPNYG00000004681	-	100	98.500	ENSMZEG00005015817	-	100	98.500	Maylandia_zebra
ENSPNYG00000004681	-	100	93.000	ENSMMOG00000003924	-	100	93.000	Mola_mola
ENSPNYG00000004681	-	100	93.500	ENSMALG00000020807	-	100	93.500	Monopterus_albus
ENSPNYG00000004681	-	54	88.889	ENSOPRG00000014416	-	100	88.889	Ochotona_princeps
ENSPNYG00000004681	-	100	90.000	ENSORLG00000025395	-	100	90.000	Oryzias_latipes
ENSPNYG00000004681	-	100	90.000	ENSORLG00020009535	-	100	90.000	Oryzias_latipes_hni
ENSPNYG00000004681	-	100	90.500	ENSORLG00015015518	-	100	90.500	Oryzias_latipes_hsok
ENSPNYG00000004681	-	100	87.065	ENSPKIG00000014528	-	100	87.065	Paramormyrops_kingsleyae
ENSPNYG00000004681	-	100	92.000	ENSPFOG00000014418	-	100	92.000	Poecilia_formosa
ENSPNYG00000004681	-	100	92.000	ENSPLAG00000003181	-	100	92.000	Poecilia_latipinna
ENSPNYG00000004681	-	100	92.000	ENSPMEG00000022988	-	100	92.000	Poecilia_mexicana
ENSPNYG00000004681	-	100	92.000	ENSPMEG00000008020	-	100	92.000	Poecilia_mexicana
ENSPNYG00000004681	-	100	90.000	ENSSFOG00015021754	rab13	100	90.000	Scleropages_formosus
ENSPNYG00000004681	-	100	94.000	ENSSMAG00000016376	-	100	94.000	Scophthalmus_maximus
ENSPNYG00000004681	-	100	66.990	ENSSMAG00000002569	-	100	66.990	Scophthalmus_maximus
ENSPNYG00000004681	-	100	95.500	ENSSDUG00000006307	-	100	95.500	Seriola_dumerili
ENSPNYG00000004681	-	100	95.500	ENSSLDG00000015823	-	100	95.500	Seriola_lalandi_dorsalis
ENSPNYG00000004681	-	100	95.500	ENSSPAG00000022440	-	100	95.500	Stegastes_partitus
ENSPNYG00000004681	-	100	93.500	ENSTNIG00000018319	-	100	93.500	Tetraodon_nigroviridis
ENSPNYG00000004681	-	100	91.000	ENSXMAG00000016094	-	100	91.000	Xiphophorus_maculatus