EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPNYG00000005192 (Gene tree)
Gene ID
102198637
Gene Symbol
pabpc1a
Alias
-
Full Name
poly(A) binding protein cytoplasmic 1
Gene Type
protein_coding
Species
Pundamilia_nyererei
Status
putative
Strand
Minus strand
Length
6240 bases
Position
chrJH419330.1:649727-655966
Accession
102198637
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPNYP00000006793PABPPF00658.184.6e-3211
ENSPNYP00000006769PABPPF00658.186.4e-3211
ENSPNYP00000006793RRM_5PF13893.63.3e-0812
ENSPNYP00000006793RRM_5PF13893.63.3e-0822
ENSPNYP00000006769RRM_5PF13893.63.5e-0812
ENSPNYP00000006769RRM_5PF13893.63.5e-0822
ENSPNYP00000006769RRM_1PF00076.221.9e-9314
ENSPNYP00000006769RRM_1PF00076.221.9e-9324
ENSPNYP00000006769RRM_1PF00076.221.9e-9334
ENSPNYP00000006769RRM_1PF00076.221.9e-9344
ENSPNYP00000006793RRM_1PF00076.228.6e-8714
ENSPNYP00000006793RRM_1PF00076.228.6e-8724
ENSPNYP00000006793RRM_1PF00076.228.6e-8734
ENSPNYP00000006793RRM_1PF00076.228.6e-8744
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPNYT00000006962-1734-ENSPNYP00000006793577 (aa)--
ENSPNYT00000006938-3669XM_005742929ENSPNYP00000006769635 (aa)XP_005742986UPI000329F8FE
Gene Model
Click here to download ENSPNYG00000005192's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000005192's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPNYG00000005192pabpc1a10089.185ENSPNYG00000012578pabpc1b10089.185
ENSPNYG00000005192pabpc1a5534.884ENSPNYG00000015832-5834.884
ENSPNYG00000005192pabpc1a6237.333ENSPNYG00000017434rbm197637.333
ENSPNYG00000005192pabpc1a7339.759ENSPNYG00000017486celf5a7439.759
ENSPNYG00000005192pabpc1a9876.592ENSPNYG00000006134pabpc49876.752
ENSPNYG00000005192pabpc1a6131.579ENSPNYG00000002643RBMS15931.579
ENSPNYG00000005192pabpc1a5836.986ENSPNYG00000011518celf3a8136.986
ENSPNYG00000005192pabpc1a5136.047ENSPNYG00000002565-5236.047
ENSPNYG00000005192pabpc1a6237.349ENSPNYG00000001514ELAVL29837.349
ENSPNYG00000005192pabpc1a6136.145ENSPNYG00000021720elavl48736.145
ENSPNYG00000005192pabpc1a6133.684ENSPNYG00000017656rbms2b5433.684
ENSPNYG00000005192pabpc1a5742.308ENSPNYG00000010982-6142.308
ENSPNYG00000005192pabpc1a9875.708ENSPNYG00000004101pabpc1l9975.708
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPNYG00000005192pabpc1a6178.889ENSG00000184388PABPC1L2B9880.102Homo_sapiens
ENSPNYG00000005192pabpc1a6178.889ENSG00000186288PABPC1L2A9880.102Homo_sapiens
ENSPNYG00000005192pabpc1a10090.439ENSAPOG00000017776pabpc1b10090.439Acanthochromis_polyacanthus
ENSPNYG00000005192pabpc1a10098.110ENSAPOG00000015105pabpc1a10098.110Acanthochromis_polyacanthus
ENSPNYG00000005192pabpc1a6178.889ENSAMEG00000019441-9880.102Ailuropoda_melanoleuca
ENSPNYG00000005192pabpc1a10087.458ENSACIG00000018366pabpc1b10086.719Amphilophus_citrinellus
ENSPNYG00000005192pabpc1a10099.213ENSACIG00000004685pabpc1a10099.213Amphilophus_citrinellus
ENSPNYG00000005192pabpc1a10090.596ENSAOCG00000019839pabpc1b10090.596Amphiprion_ocellaris
ENSPNYG00000005192pabpc1a10098.268ENSAOCG00000011656pabpc1a10098.268Amphiprion_ocellaris
ENSPNYG00000005192pabpc1a10098.268ENSAPEG00000006963pabpc1a10098.268Amphiprion_percula
ENSPNYG00000005192pabpc1a10090.596ENSAPEG00000010435pabpc1b10090.596Amphiprion_percula
ENSPNYG00000005192pabpc1a10089.515ENSATEG00000012917pabpc1b10089.515Anabas_testudineus
ENSPNYG00000005192pabpc1a10097.638ENSATEG00000024852pabpc1a10097.638Anabas_testudineus
ENSPNYG00000005192pabpc1a6178.889ENSANAG00000019431-9880.102Aotus_nancymaae
ENSPNYG00000005192pabpc1a6178.889ENSANAG00000019429-9880.102Aotus_nancymaae
ENSPNYG00000005192pabpc1a100100.000ENSACLG00000009399pabpc1a100100.000Astatotilapia_calliptera
ENSPNYG00000005192pabpc1a10089.185ENSACLG00000014335pabpc1b10089.185Astatotilapia_calliptera
ENSPNYG00000005192pabpc1a10090.439ENSAMXG00000008599pabpc1b10090.439Astyanax_mexicanus
ENSPNYG00000005192pabpc1a6178.889ENSBTAG00000050902-9879.024Bos_taurus
ENSPNYG00000005192pabpc1a6178.889ENSBTAG00000052491-9778.889Bos_taurus
ENSPNYG00000005192pabpc1a6178.889ENSCJAG00000041326-9880.102Callithrix_jacchus
ENSPNYG00000005192pabpc1a6178.889ENSCAFG00020002052-9879.024Canis_lupus_dingo
ENSPNYG00000005192pabpc1a6178.889ENSCHIG00000011138-9880.102Capra_hircus
ENSPNYG00000005192pabpc1a6178.889ENSCHIG00000006283-9880.102Capra_hircus
ENSPNYG00000005192pabpc1a6178.889ENSTSYG00000001775-9880.102Carlito_syrichta
ENSPNYG00000005192pabpc1a6178.889ENSCPOG00000009525-9880.102Cavia_porcellus
ENSPNYG00000005192pabpc1a6178.889ENSCCAG00000031524-9880.102Cebus_capucinus
ENSPNYG00000005192pabpc1a6178.889ENSCATG00000043125-9880.102Cercocebus_atys
ENSPNYG00000005192pabpc1a6178.889ENSCATG00000042826-9880.102Cercocebus_atys
ENSPNYG00000005192pabpc1a6176.667ENSCLAG00000017409-9878.061Chinchilla_lanigera
ENSPNYG00000005192pabpc1a6176.667ENSCLAG00000017412-9878.061Chinchilla_lanigera
ENSPNYG00000005192pabpc1a6178.889ENSCSAG00000000102-9880.102Chlorocebus_sabaeus
ENSPNYG00000005192pabpc1a6179.641ENSCGRG00001023387-9677.436Cricetulus_griseus_chok1gshd
ENSPNYG00000005192pabpc1a10088.871ENSCSEG00000015241-10088.871Cynoglossus_semilaevis
ENSPNYG00000005192pabpc1a9997.468ENSCSEG00000013324pabpc1a10097.468Cynoglossus_semilaevis
ENSPNYG00000005192pabpc1a10097.638ENSCVAG00000021872pabpc1a10097.638Cyprinodon_variegatus
ENSPNYG00000005192pabpc1a10087.793ENSCVAG00000005489pabpc1b10087.793Cyprinodon_variegatus
ENSPNYG00000005192pabpc1a10089.342ENSDARG00000021140pabpc1b9992.199Danio_rerio
ENSPNYG00000005192pabpc1a10091.536ENSDARG00000017219pabpc1a10091.536Danio_rerio
ENSPNYG00000005192pabpc1a6179.191ENSDNOG00000030926-9878.571Dasypus_novemcinctus
ENSPNYG00000005192pabpc1a6176.111ENSDORG00000011362-9877.551Dipodomys_ordii
ENSPNYG00000005192pabpc1a6178.889ENSEASG00005010399-9878.641Equus_asinus_asinus
ENSPNYG00000005192pabpc1a6178.889ENSECAG00000002620-9878.641Equus_caballus
ENSPNYG00000005192pabpc1a6175.000ENSEEUG00000008203-9876.020Erinaceus_europaeus
ENSPNYG00000005192pabpc1a10088.750ENSELUG00000015062-10088.750Esox_lucius
ENSPNYG00000005192pabpc1a9993.868ENSELUG00000003614pabpc1a10093.868Esox_lucius
ENSPNYG00000005192pabpc1a6158.937ENSELUG00000005389-9758.621Esox_lucius
ENSPNYG00000005192pabpc1a6178.889ENSFCAG00000039701-9880.102Felis_catus
ENSPNYG00000005192pabpc1a6178.889ENSFDAG00000005484-9880.102Fukomys_damarensis
ENSPNYG00000005192pabpc1a10097.795ENSFHEG00000018979pabpc1a10097.795Fundulus_heteroclitus
ENSPNYG00000005192pabpc1a10089.342ENSFHEG00000008186pabpc1b10089.498Fundulus_heteroclitus
ENSPNYG00000005192pabpc1a10080.930ENSGMOG00000002448-10080.930Gadus_morhua
ENSPNYG00000005192pabpc1a9993.045ENSGMOG00000013448pabpc1a9993.199Gadus_morhua
ENSPNYG00000005192pabpc1a10097.323ENSGAFG00000019750pabpc1a10097.323Gambusia_affinis
ENSPNYG00000005192pabpc1a10089.969ENSGAFG00000010193pabpc1b10090.125Gambusia_affinis
ENSPNYG00000005192pabpc1a10097.480ENSGACG00000003572pabpc1a10097.480Gasterosteus_aculeatus
ENSPNYG00000005192pabpc1a10087.578ENSGACG00000003771pabpc1b10087.907Gasterosteus_aculeatus
ENSPNYG00000005192pabpc1a6178.889ENSGGOG00000038606-9880.102Gorilla_gorilla
ENSPNYG00000005192pabpc1a6178.889ENSGGOG00000043933-9880.102Gorilla_gorilla
ENSPNYG00000005192pabpc1a100100.000ENSHBUG00000020487pabpc1a100100.000Haplochromis_burtoni
ENSPNYG00000005192pabpc1a10089.185ENSHBUG00000002075pabpc1b10089.185Haplochromis_burtoni
ENSPNYG00000005192pabpc1a6177.778ENSHGLG00000019762-9879.082Heterocephalus_glaber_female
ENSPNYG00000005192pabpc1a6177.778ENSHGLG00000019668-9879.082Heterocephalus_glaber_female
ENSPNYG00000005192pabpc1a6177.778ENSHGLG00100020854-9879.082Heterocephalus_glaber_male
ENSPNYG00000005192pabpc1a9870.470ENSHCOG00000003175pabpc1b9970.470Hippocampus_comes
ENSPNYG00000005192pabpc1a10097.480ENSHCOG00000013502pabpc1a10097.480Hippocampus_comes
ENSPNYG00000005192pabpc1a10090.866ENSIPUG00000008848pabpc1a10090.866Ictalurus_punctatus
ENSPNYG00000005192pabpc1a7358.095ENSIPUG00000021244-6555.717Ictalurus_punctatus
ENSPNYG00000005192pabpc1a7858.209ENSIPUG00000018724-7658.209Ictalurus_punctatus
ENSPNYG00000005192pabpc1a10087.329ENSIPUG00000010791-9987.329Ictalurus_punctatus
ENSPNYG00000005192pabpc1a6178.333ENSSTOG00000022096-9879.592Ictidomys_tridecemlineatus
ENSPNYG00000005192pabpc1a6178.333ENSSTOG00000026028-9879.592Ictidomys_tridecemlineatus
ENSPNYG00000005192pabpc1a6177.222ENSJJAG00000007037-9878.571Jaculus_jaculus
ENSPNYG00000005192pabpc1a10097.638ENSKMAG00000000605pabpc1a10097.638Kryptolebias_marmoratus
ENSPNYG00000005192pabpc1a10088.679ENSKMAG00000008049pabpc1b10088.836Kryptolebias_marmoratus
ENSPNYG00000005192pabpc1a10089.342ENSLBEG00000026845pabpc1b10089.342Labrus_bergylta
ENSPNYG00000005192pabpc1a10097.480ENSLBEG00000024002-10097.480Labrus_bergylta
ENSPNYG00000005192pabpc1a6177.778ENSLAFG00000023096-9878.974Loxodonta_africana
ENSPNYG00000005192pabpc1a6178.453ENSMFAG00000028878-9879.695Macaca_fascicularis
ENSPNYG00000005192pabpc1a6178.889ENSMMUG00000009740-9880.102Macaca_mulatta
ENSPNYG00000005192pabpc1a6178.889ENSMMUG00000037681-9880.102Macaca_mulatta
ENSPNYG00000005192pabpc1a6178.889ENSMMUG00000039929-9880.102Macaca_mulatta
ENSPNYG00000005192pabpc1a6178.889ENSMNEG00000037732-9880.102Macaca_nemestrina
ENSPNYG00000005192pabpc1a6178.889ENSMLEG00000027495-9880.102Mandrillus_leucophaeus
ENSPNYG00000005192pabpc1a9998.798ENSMAMG00000004502-10097.795Mastacembelus_armatus
ENSPNYG00000005192pabpc1a10089.655ENSMAMG00000014610pabpc1b10089.655Mastacembelus_armatus
ENSPNYG00000005192pabpc1a10089.185ENSMZEG00005026745pabpc1b10089.185Maylandia_zebra
ENSPNYG00000005192pabpc1a100100.000ENSMZEG00005025416pabpc1a100100.000Maylandia_zebra
ENSPNYG00000005192pabpc1a6178.889ENSMICG00000047642-9880.102Microcebus_murinus
ENSPNYG00000005192pabpc1a9998.077ENSMMOG00000018044pabpc1a10098.077Mola_mola
ENSPNYG00000005192pabpc1a10087.671ENSMMOG00000018009pabpc1b9987.671Mola_mola
ENSPNYG00000005192pabpc1a9872.873ENSMODG00000013156-9873.194Monodelphis_domestica
ENSPNYG00000005192pabpc1a9866.188ENSMODG00000015024-9965.517Monodelphis_domestica
ENSPNYG00000005192pabpc1a10097.480ENSMALG00000013020-10097.480Monopterus_albus
ENSPNYG00000005192pabpc1a10086.874ENSMALG00000006066pabpc1b9986.403Monopterus_albus
ENSPNYG00000005192pabpc1a6180.838ENSNGAG00000012688-9878.571Nannospalax_galili
ENSPNYG00000005192pabpc1a10099.843ENSNBRG00000003068-100100.000Neolamprologus_brichardi
ENSPNYG00000005192pabpc1a10089.483ENSNBRG00000013737pabpc1b10089.185Neolamprologus_brichardi
ENSPNYG00000005192pabpc1a6178.889ENSNLEG00000018128-9880.102Nomascus_leucogenys
ENSPNYG00000005192pabpc1a6178.333ENSODEG00000018540-9879.592Octodon_degus
ENSPNYG00000005192pabpc1a10089.342ENSONIG00000002717pabpc1b10089.342Oreochromis_niloticus
ENSPNYG00000005192pabpc1a10099.055ENSONIG00000006871-10099.055Oreochromis_niloticus
ENSPNYG00000005192pabpc1a6178.889ENSOCUG00000002565-9880.102Oryctolagus_cuniculus
ENSPNYG00000005192pabpc1a9998.571ENSORLG00000002691pabpc1a10098.571Oryzias_latipes
ENSPNYG00000005192pabpc1a9985.533ENSORLG00000003008-9985.374Oryzias_latipes
ENSPNYG00000005192pabpc1a10096.378ENSORLG00020022398pabpc1a10096.378Oryzias_latipes_hni
ENSPNYG00000005192pabpc1a10084.772ENSORLG00020022259-10084.615Oryzias_latipes_hni
ENSPNYG00000005192pabpc1a10096.220ENSORLG00015013633pabpc110096.220Oryzias_latipes_hsok
ENSPNYG00000005192pabpc1a10085.243ENSORLG00015010932-10085.086Oryzias_latipes_hsok
ENSPNYG00000005192pabpc1a10074.611ENSOMEG00000013627pabpc1b10081.922Oryzias_melastigma
ENSPNYG00000005192pabpc1a10097.165ENSOMEG00000020219pabpc1a10097.165Oryzias_melastigma
ENSPNYG00000005192pabpc1a6178.889ENSOGAG00000026047-9880.102Otolemur_garnettii
ENSPNYG00000005192pabpc1a6178.889ENSOGAG00000029513-9880.102Otolemur_garnettii
ENSPNYG00000005192pabpc1a6178.889ENSOARG00000005943-9880.102Ovis_aries
ENSPNYG00000005192pabpc1a6178.889ENSPPAG00000012920-9880.102Pan_paniscus
ENSPNYG00000005192pabpc1a6178.889ENSPPRG00000011809-9880.102Panthera_pardus
ENSPNYG00000005192pabpc1a6178.889ENSPPRG00000011804-9880.102Panthera_pardus
ENSPNYG00000005192pabpc1a6178.889ENSPTRG00000028252-9880.102Pan_troglodytes
ENSPNYG00000005192pabpc1a6178.889ENSPANG00000011549-9880.102Papio_anubis
ENSPNYG00000005192pabpc1a10090.439ENSPKIG00000005676pabpc1b10090.439Paramormyrops_kingsleyae
ENSPNYG00000005192pabpc1a7689.749ENSPMGG00000023134-9792.377Periophthalmus_magnuspinnatus
ENSPNYG00000005192pabpc1a7793.694ENSPMGG00000022487pabpc1a9298.202Periophthalmus_magnuspinnatus
ENSPNYG00000005192pabpc1a9971.949ENSPCIG00000016995-5571.949Phascolarctos_cinereus
ENSPNYG00000005192pabpc1a10089.498ENSPFOG00000005917pabpc1b10089.655Poecilia_formosa
ENSPNYG00000005192pabpc1a10096.136ENSPFOG00000010815pabpc1a10096.136Poecilia_formosa
ENSPNYG00000005192pabpc1a10098.110ENSPLAG00000004114pabpc1a10098.110Poecilia_latipinna
ENSPNYG00000005192pabpc1a10089.812ENSPLAG00000001388pabpc1b10089.969Poecilia_latipinna
ENSPNYG00000005192pabpc1a10089.498ENSPMEG00000014399pabpc1b10089.655Poecilia_mexicana
ENSPNYG00000005192pabpc1a10098.110ENSPMEG00000001334pabpc1a10098.110Poecilia_mexicana
ENSPNYG00000005192pabpc1a10089.812ENSPREG00000010911pabpc1b10089.969Poecilia_reticulata
ENSPNYG00000005192pabpc1a9999.519ENSPREG00000019595pabpc1a10099.519Poecilia_reticulata
ENSPNYG00000005192pabpc1a6178.889ENSPPYG00000020468-9880.102Pongo_abelii
ENSPNYG00000005192pabpc1a6178.889ENSPCAG00000005308-9880.102Procavia_capensis
ENSPNYG00000005192pabpc1a6178.333ENSPCOG00000026349-9879.592Propithecus_coquereli
ENSPNYG00000005192pabpc1a6179.330ENSPVAG00000016117-9880.513Pteropus_vampyrus
ENSPNYG00000005192pabpc1a10091.994ENSPNAG00000028408pabpc1a10091.680Pygocentrus_nattereri
ENSPNYG00000005192pabpc1a10089.812ENSPNAG00000024626pabpc1b10089.812Pygocentrus_nattereri
ENSPNYG00000005192pabpc1a9989.671ENSRBIG00000028738-9589.671Rhinopithecus_bieti
ENSPNYG00000005192pabpc1a6178.889ENSRBIG00000027173-9880.102Rhinopithecus_bieti
ENSPNYG00000005192pabpc1a6178.889ENSRROG00000017404-9880.102Rhinopithecus_roxellana
ENSPNYG00000005192pabpc1a9863.622ENSSHAG00000000511-10063.622Sarcophilus_harrisii
ENSPNYG00000005192pabpc1a10089.639ENSSFOG00015006662pabpc1a10089.796Scleropages_formosus
ENSPNYG00000005192pabpc1a10090.424ENSSFOG00015002752-10090.424Scleropages_formosus
ENSPNYG00000005192pabpc1a7477.070ENSSFOG00015019668-9077.070Scleropages_formosus
ENSPNYG00000005192pabpc1a10097.795ENSSMAG00000010803pabpc1a10097.795Scophthalmus_maximus
ENSPNYG00000005192pabpc1a10088.871ENSSMAG00000006869pabpc1b10089.028Scophthalmus_maximus
ENSPNYG00000005192pabpc1a10097.638ENSSDUG00000006675pabpc1a10097.638Seriola_dumerili
ENSPNYG00000005192pabpc1a10088.401ENSSDUG00000011965pabpc1b10088.558Seriola_dumerili
ENSPNYG00000005192pabpc1a10097.638ENSSLDG00000011661pabpc1a10097.638Seriola_lalandi_dorsalis
ENSPNYG00000005192pabpc1a10090.047ENSSLDG00000014156pabpc1b10090.202Seriola_lalandi_dorsalis
ENSPNYG00000005192pabpc1a10090.596ENSSPAG00000019265pabpc1b10090.909Stegastes_partitus
ENSPNYG00000005192pabpc1a10098.268ENSSPAG00000014453-10098.268Stegastes_partitus
ENSPNYG00000005192pabpc1a6178.889ENSSSCG00000036336-9880.102Sus_scrofa
ENSPNYG00000005192pabpc1a6178.889ENSSSCG00000032167-9880.102Sus_scrofa
ENSPNYG00000005192pabpc1a10095.283ENSTRUG00000011577-10095.440Takifugu_rubripes
ENSPNYG00000005192pabpc1a10086.228ENSTRUG00000003767-10086.228Takifugu_rubripes
ENSPNYG00000005192pabpc1a10086.604ENSTNIG00000009153pabpc1b10086.604Tetraodon_nigroviridis
ENSPNYG00000005192pabpc1a10092.248ENSTNIG00000013307pabpc1a10092.403Tetraodon_nigroviridis
ENSPNYG00000005192pabpc1a6178.889ENSTTRG00000013181-9880.102Tursiops_truncatus
ENSPNYG00000005192pabpc1a6178.889ENSUAMG00000008089-9880.102Ursus_americanus
ENSPNYG00000005192pabpc1a6178.889ENSUMAG00000003364-9880.102Ursus_maritimus
ENSPNYG00000005192pabpc1a9755.017ENSUMAG00000023926-8969.890Ursus_maritimus
ENSPNYG00000005192pabpc1a6178.333ENSVVUG00000015892-9779.000Vulpes_vulpes
ENSPNYG00000005192pabpc1a9846.324ENSXETG00000015439-9746.324Xenopus_tropicalis
ENSPNYG00000005192pabpc1a10085.836ENSXCOG00000019901pabpc1b10085.423Xiphophorus_couchianus
ENSPNYG00000005192pabpc1a10095.189ENSXCOG00000017066pabpc1a9995.189Xiphophorus_couchianus
ENSPNYG00000005192pabpc1a10097.480ENSXMAG00000002555pabpc1a10097.480Xiphophorus_maculatus
ENSPNYG00000005192pabpc1a10089.969ENSXMAG00000003753pabpc1b10090.125Xiphophorus_maculatus

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