EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000005379 (Gene tree)
Gene ID: 102201983
Gene Symbol: grsf1
Alias: wu:fb62c04|zgc:153305
Full Name: G-rich sequence factor 1-like
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 6410 bases
Position: chrJH419243.1:807336-813745
Accession: 102201983
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000007014	RRM_1	PF00076.22	1.4e-29	1	2
ENSPNYP00000007014	RRM_1	PF00076.22	1.4e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000007188	-	2636	XM_005730523	ENSPNYP00000007014	396 (aa)	XP_005730580	UPI0003AF8C03

Gene Model

Click here to download ENSPNYG00000005379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000005379's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000005379	grsf1	78	44.713	ENSPNYG00000000204	hnrnph1	94	42.571
ENSPNYG00000005379	grsf1	77	58.228	ENSPNYG00000016363	hnrnph3	69	58.228

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000005379	grsf1	100	71.287	ENSAPOG00000012487	grsf1	100	71.287	Acanthochromis_polyacanthus
ENSPNYG00000005379	grsf1	100	80.000	ENSACIG00000005871	grsf1	100	80.750	Amphilophus_citrinellus
ENSPNYG00000005379	grsf1	100	72.772	ENSAOCG00000017462	-	100	72.772	Amphiprion_ocellaris
ENSPNYG00000005379	grsf1	100	72.750	ENSAPEG00000007240	-	100	72.750	Amphiprion_percula
ENSPNYG00000005379	grsf1	98	68.939	ENSATEG00000007185	grsf1	99	68.939	Anabas_testudineus
ENSPNYG00000005379	grsf1	100	97.750	ENSACLG00000003685	-	100	97.750	Astatotilapia_calliptera
ENSPNYG00000005379	grsf1	86	51.863	ENSAMXG00000012270	grsf1	99	51.863	Astyanax_mexicanus
ENSPNYG00000005379	grsf1	99	59.184	ENSCSEG00000019209	-	99	59.763	Cynoglossus_semilaevis
ENSPNYG00000005379	grsf1	99	64.662	ENSCVAG00000004476	grsf1	100	64.662	Cyprinodon_variegatus
ENSPNYG00000005379	grsf1	97	47.570	ENSDARG00000053021	grsf1	93	47.570	Danio_rerio
ENSPNYG00000005379	grsf1	99	50.000	ENSFHEG00000013358	-	99	50.493	Fundulus_heteroclitus
ENSPNYG00000005379	grsf1	77	53.667	ENSGMOG00000014047	grsf1	100	53.667	Gadus_morhua
ENSPNYG00000005379	grsf1	99	62.871	ENSGAFG00000004496	grsf1	99	62.871	Gambusia_affinis
ENSPNYG00000005379	grsf1	77	64.087	ENSGACG00000014447	grsf1	97	64.087	Gasterosteus_aculeatus
ENSPNYG00000005379	grsf1	100	98.000	ENSHBUG00000006284	grsf1	99	98.000	Haplochromis_burtoni
ENSPNYG00000005379	grsf1	99	58.794	ENSHCOG00000007715	-	99	58.794	Hippocampus_comes
ENSPNYG00000005379	grsf1	85	53.254	ENSIPUG00000010533	grsf1	84	53.254	Ictalurus_punctatus
ENSPNYG00000005379	grsf1	99	60.664	ENSKMAG00000004528	grsf1	100	60.664	Kryptolebias_marmoratus
ENSPNYG00000005379	grsf1	76	59.184	ENSLBEG00000018100	grsf1	93	59.184	Labrus_bergylta
ENSPNYG00000005379	grsf1	99	68.473	ENSMAMG00000002627	grsf1	99	68.473	Mastacembelus_armatus
ENSPNYG00000005379	grsf1	100	97.750	ENSMZEG00005020633	-	100	97.750	Maylandia_zebra
ENSPNYG00000005379	grsf1	97	65.426	ENSMMOG00000014231	grsf1	99	65.206	Mola_mola
ENSPNYG00000005379	grsf1	100	65.060	ENSMALG00000000251	grsf1	100	65.060	Monopterus_albus
ENSPNYG00000005379	grsf1	98	95.420	ENSNBRG00000017774	grsf1	96	95.420	Neolamprologus_brichardi
ENSPNYG00000005379	grsf1	100	93.500	ENSONIG00000014119	grsf1	100	93.500	Oreochromis_niloticus
ENSPNYG00000005379	grsf1	99	64.286	ENSORLG00000030211	grsf1	99	64.286	Oryzias_latipes
ENSPNYG00000005379	grsf1	99	62.404	ENSORLG00020014383	grsf1	99	63.171	Oryzias_latipes_hni
ENSPNYG00000005379	grsf1	99	62.916	ENSORLG00015006520	grsf1	99	64.194	Oryzias_latipes_hsok
ENSPNYG00000005379	grsf1	89	66.761	ENSOMEG00000009181	grsf1	99	65.217	Oryzias_melastigma
ENSPNYG00000005379	grsf1	83	56.667	ENSPKIG00000019432	grsf1	88	53.973	Paramormyrops_kingsleyae
ENSPNYG00000005379	grsf1	82	65.672	ENSPMGG00000013654	grsf1	92	65.672	Periophthalmus_magnuspinnatus
ENSPNYG00000005379	grsf1	99	62.836	ENSPFOG00000006122	grsf1	99	62.864	Poecilia_formosa
ENSPNYG00000005379	grsf1	99	63.480	ENSPLAG00000020977	grsf1	99	62.990	Poecilia_latipinna
ENSPNYG00000005379	grsf1	99	62.162	ENSPMEG00000012485	grsf1	99	62.654	Poecilia_mexicana
ENSPNYG00000005379	grsf1	99	62.683	ENSPREG00000013383	grsf1	99	63.171	Poecilia_reticulata
ENSPNYG00000005379	grsf1	81	57.407	ENSPNAG00000014912	grsf1	78	57.407	Pygocentrus_nattereri
ENSPNYG00000005379	grsf1	82	47.024	ENSSFOG00015014620	grsf1	83	47.024	Scleropages_formosus
ENSPNYG00000005379	grsf1	100	63.914	ENSSMAG00000014181	grsf1	88	63.914	Scophthalmus_maximus
ENSPNYG00000005379	grsf1	100	63.861	ENSSDUG00000009397	-	98	68.769	Seriola_dumerili
ENSPNYG00000005379	grsf1	100	65.594	ENSSLDG00000025494	grsf1	100	65.594	Seriola_lalandi_dorsalis
ENSPNYG00000005379	grsf1	99	66.089	ENSSPAG00000023296	grsf1	99	66.089	Stegastes_partitus
ENSPNYG00000005379	grsf1	96	60.836	ENSTRUG00000015354	grsf1	99	60.759	Takifugu_rubripes
ENSPNYG00000005379	grsf1	80	63.492	ENSTNIG00000015350	-	100	63.810	Tetraodon_nigroviridis
ENSPNYG00000005379	grsf1	99	63.366	ENSXMAG00000029710	grsf1	100	63.366	Xiphophorus_maculatus