EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000005654 (Gene tree)
Gene ID: 102207014
Gene Symbol: rab12 (1 of many)
Alias: zgc:111945
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 18220 bases
Position: chrJH419236.1:2186793-2205012
Accession: 102207014
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000007397	MMR_HSR1	PF01926.23	5.8e-07	1	1
ENSPNYP00000007383	MMR_HSR1	PF01926.23	7.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000007578	-	4682	XM_005729039	ENSPNYP00000007397	243 (aa)	XP_005729096	UPI000329E4E8
ENSPNYT00000007564	-	1298	-	ENSPNYP00000007383	339 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000005654's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000005654's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000005654	rab12	74	36.464	ENSPNYG00000011135	RAB17	74	38.012
ENSPNYG00000005654	rab12	85	40.284	ENSPNYG00000022091	RAB15	90	42.268
ENSPNYG00000005654	rab12	68	32.335	ENSPNYG00000006192	rheb	89	32.335
ENSPNYG00000005654	rab12	79	32.487	ENSPNYG00000017514	rab34a	68	33.898
ENSPNYG00000005654	rab12	70	49.112	ENSPNYG00000010377	rab1ba	84	49.112
ENSPNYG00000005654	rab12	68	43.452	ENSPNYG00000019276	-	96	37.619
ENSPNYG00000005654	rab12	62	31.788	ENSPNYG00000013814	KRAS	85	32.099
ENSPNYG00000005654	rab12	65	40.252	ENSPNYG00000019963	rab6ba	93	37.853
ENSPNYG00000005654	rab12	85	38.164	ENSPNYG00000007156	rab35b	92	42.473
ENSPNYG00000005654	rab12	65	36.196	ENSPNYG00000015328	RAB9A	89	32.692
ENSPNYG00000005654	rab12	84	38.095	ENSPNYG00000018244	rab11al	76	42.424
ENSPNYG00000005654	rab12	65	32.704	ENSPNYG00000001744	rhebl1	85	32.704
ENSPNYG00000005654	rab12	85	36.321	ENSPNYG00000007314	-	80	40.462
ENSPNYG00000005654	rab12	68	37.059	ENSPNYG00000018613	si:dkey-13a21.4	82	37.059
ENSPNYG00000005654	rab12	79	36.364	ENSPNYG00000000044	rab33a	68	40.491
ENSPNYG00000005654	rab12	83	38.942	ENSPNYG00000010325	rab42a	86	35.808
ENSPNYG00000005654	rab12	67	35.119	ENSPNYG00000000233	rab9b	78	34.857
ENSPNYG00000005654	rab12	65	34.375	ENSPNYG00000017153	rab34b	83	35.333
ENSPNYG00000005654	rab12	67	48.780	ENSPNYG00000007064	rab18a	79	48.780
ENSPNYG00000005654	rab12	71	38.372	ENSPNYG00000015851	-	75	38.372
ENSPNYG00000005654	rab12	70	42.353	ENSPNYG00000018214	rab25b	87	41.758
ENSPNYG00000005654	rab12	71	40.462	ENSPNYG00000008498	-	81	38.587
ENSPNYG00000005654	rab12	72	49.143	ENSPNYG00000009172	rab1ab	83	50.296
ENSPNYG00000005654	rab12	68	30.000	ENSPNYG00000017665	rasl11a	68	30.000
ENSPNYG00000005654	rab12	77	45.455	ENSPNYG00000009728	rab30	80	46.409
ENSPNYG00000005654	rab12	84	38.679	ENSPNYG00000019611	-	75	43.636
ENSPNYG00000005654	rab12	65	38.994	ENSPNYG00000013288	rab41	81	37.427
ENSPNYG00000005654	rab12	64	31.210	ENSPNYG00000005416	si:ch73-116o1.2	80	31.548
ENSPNYG00000005654	rab12	100	100.000	ENSPNYG00000023905	rab12	100	100.000
ENSPNYG00000005654	rab12	71	46.512	ENSPNYG00000007520	-	81	46.512
ENSPNYG00000005654	rab12	67	33.929	ENSPNYG00000008014	rab32b	78	33.918
ENSPNYG00000005654	rab12	84	39.320	ENSPNYG00000010491	rab25a	96	37.379
ENSPNYG00000005654	rab12	67	49.390	ENSPNYG00000001751	rab18b	87	46.667
ENSPNYG00000005654	rab12	84	38.426	ENSPNYG00000019644	rab11ba	75	43.030
ENSPNYG00000005654	rab12	70	45.029	ENSPNYG00000000512	rab15	92	43.878
ENSPNYG00000005654	rab12	67	39.053	ENSPNYG00000015355	RAB29	81	39.053
ENSPNYG00000005654	rab12	71	37.572	ENSPNYG00000010615	rab5c	76	37.572
ENSPNYG00000005654	rab12	83	34.826	ENSPNYG00000010612	rab5aa	85	37.097
ENSPNYG00000005654	rab12	60	38.562	ENSPNYG00000003511	-	63	38.562
ENSPNYG00000005654	rab12	68	42.515	ENSPNYG00000015774	RAB39B	96	37.143
ENSPNYG00000005654	rab12	73	39.560	ENSPNYG00000012922	zgc:101559	77	39.560
ENSPNYG00000005654	rab12	67	31.902	ENSPNYG00000004845	rabl2	81	30.811
ENSPNYG00000005654	rab12	84	38.426	ENSPNYG00000004098	rab11bb	75	43.636
ENSPNYG00000005654	rab12	77	32.474	ENSPNYG00000019639	rab23	78	33.951
ENSPNYG00000005654	rab12	79	40.625	ENSPNYG00000012426	rab2a	92	40.816
ENSPNYG00000005654	rab12	71	40.462	ENSPNYG00000005326	-	80	40.462
ENSPNYG00000005654	rab12	83	35.644	ENSPNYG00000020556	rab6a	87	38.122
ENSPNYG00000005654	rab12	64	40.645	ENSPNYG00000010861	rab6bb	77	40.645
ENSPNYG00000005654	rab12	68	37.647	ENSPNYG00000005809	-	84	37.143
ENSPNYG00000005654	rab12	69	38.674	ENSPNYG00000013054	rab33ba	78	39.683
ENSPNYG00000005654	rab12	69	41.916	ENSPNYG00000009490	si:dkey-16l2.16	89	39.683
ENSPNYG00000005654	rab12	78	46.561	ENSPNYG00000015841	-	83	50.296
ENSPNYG00000005654	rab12	84	38.967	ENSPNYG00000002252	rab11a	95	38.967
ENSPNYG00000005654	rab12	77	37.895	ENSPNYG00000020409	RAB7A	87	37.017
ENSPNYG00000005654	rab12	71	51.744	ENSPNYG00000004681	-	88	51.977

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000005654	rab12	100	80.894	ENSG00000206418	RAB12	91	87.892	Homo_sapiens
ENSPNYG00000005654	rab12	89	78.082	ENSAMEG00000007452	RAB12	94	81.735	Ailuropoda_melanoleuca
ENSPNYG00000005654	rab12	100	98.770	ENSACIG00000020616	rab12	100	98.770	Amphilophus_citrinellus
ENSPNYG00000005654	rab12	100	98.354	ENSAOCG00000002130	rab12	100	98.354	Amphiprion_ocellaris
ENSPNYG00000005654	rab12	100	98.354	ENSAPEG00000013255	rab12	100	98.354	Amphiprion_percula
ENSPNYG00000005654	rab12	100	97.942	ENSATEG00000019683	rab12	100	97.942	Anabas_testudineus
ENSPNYG00000005654	rab12	89	84.932	ENSACAG00000003360	RAB12	86	87.892	Anolis_carolinensis
ENSPNYG00000005654	rab12	100	100.000	ENSACLG00000007696	rab12	100	100.000	Astatotilapia_calliptera
ENSPNYG00000005654	rab12	100	89.837	ENSAMXG00000004882	rab12	100	90.650	Astyanax_mexicanus
ENSPNYG00000005654	rab12	93	85.022	ENSBTAG00000010356	RAB12	91	88.341	Bos_taurus
ENSPNYG00000005654	rab12	93	84.513	ENSCJAG00000015468	RAB12	72	84.082	Callithrix_jacchus
ENSPNYG00000005654	rab12	93	84.581	ENSCAFG00020023721	RAB12	84	84.146	Canis_lupus_dingo
ENSPNYG00000005654	rab12	93	85.022	ENSCHIG00000016103	RAB12	91	88.341	Capra_hircus
ENSPNYG00000005654	rab12	86	85.238	ENSCPOG00000022689	RAB12	100	89.524	Cavia_porcellus
ENSPNYG00000005654	rab12	100	80.816	ENSCCAG00000022862	RAB12	100	84.082	Cebus_capucinus
ENSPNYG00000005654	rab12	91	84.375	ENSCATG00000037784	RAB12	93	87.892	Cercocebus_atys
ENSPNYG00000005654	rab12	84	88.780	ENSCSAG00000017569	RAB12	72	83.871	Chlorocebus_sabaeus
ENSPNYG00000005654	rab12	93	83.700	ENSCPBG00000028375	RAB12	91	88.341	Chrysemys_picta_bellii
ENSPNYG00000005654	rab12	89	84.475	ENSCANG00000031453	RAB12	99	88.128	Colobus_angolensis_palliatus
ENSPNYG00000005654	rab12	93	84.141	ENSCGRG00001006958	Rab12	83	83.333	Cricetulus_griseus_chok1gshd
ENSPNYG00000005654	rab12	100	97.942	ENSCSEG00000016933	rab12	100	97.942	Cynoglossus_semilaevis
ENSPNYG00000005654	rab12	100	97.154	ENSCVAG00000003539	rab12	100	97.154	Cyprinodon_variegatus
ENSPNYG00000005654	rab12	100	88.066	ENSDARG00000089428	rab12	94	94.091	Danio_rerio
ENSPNYG00000005654	rab12	84	88.293	ENSDNOG00000046064	RAB12	51	87.444	Dasypus_novemcinctus
ENSPNYG00000005654	rab12	92	83.260	ENSDORG00000008920	Rab12	98	87.892	Dipodomys_ordii
ENSPNYG00000005654	rab12	78	66.138	ENSEBUG00000006581	rab12	89	67.582	Eptatretus_burgeri
ENSPNYG00000005654	rab12	93	84.141	ENSEASG00005002926	RAB12	83	83.740	Equus_asinus_asinus
ENSPNYG00000005654	rab12	93	84.141	ENSECAG00000007384	RAB12	71	83.740	Equus_caballus
ENSPNYG00000005654	rab12	100	91.358	ENSELUG00000007123	rab12	100	89.300	Esox_lucius
ENSPNYG00000005654	rab12	93	84.581	ENSFCAG00000027710	RAB12	72	84.146	Felis_catus
ENSPNYG00000005654	rab12	100	97.143	ENSFHEG00000004319	rab12	100	97.143	Fundulus_heteroclitus
ENSPNYG00000005654	rab12	86	92.823	ENSGMOG00000012335	rab12	87	91.388	Gadus_morhua
ENSPNYG00000005654	rab12	93	83.772	ENSGALG00000033608	RAB12	89	87.892	Gallus_gallus
ENSPNYG00000005654	rab12	97	87.712	ENSGACG00000016639	rab12	100	93.119	Gasterosteus_aculeatus
ENSPNYG00000005654	rab12	93	83.260	ENSGAGG00000007278	RAB12	91	88.341	Gopherus_agassizii
ENSPNYG00000005654	rab12	100	100.000	ENSHBUG00000008497	rab12	100	100.000	Haplochromis_burtoni
ENSPNYG00000005654	rab12	97	79.747	ENSHGLG00000006189	RAB12	86	88.235	Heterocephalus_glaber_female
ENSPNYG00000005654	rab12	100	91.770	ENSHCOG00000012376	rab12	100	91.770	Hippocampus_comes
ENSPNYG00000005654	rab12	91	93.665	ENSIPUG00000017401	rab12	90	93.636	Ictalurus_punctatus
ENSPNYG00000005654	rab12	92	82.667	ENSSTOG00000025122	RAB12	96	87.671	Ictidomys_tridecemlineatus
ENSPNYG00000005654	rab12	91	84.375	ENSJJAG00000019064	Rab12	98	87.892	Jaculus_jaculus
ENSPNYG00000005654	rab12	100	93.416	ENSKMAG00000020056	rab12	100	92.181	Kryptolebias_marmoratus
ENSPNYG00000005654	rab12	100	97.531	ENSLBEG00000013756	rab12	100	97.531	Labrus_bergylta
ENSPNYG00000005654	rab12	91	87.892	ENSLACG00000010461	RAB12	90	87.892	Latimeria_chalumnae
ENSPNYG00000005654	rab12	100	83.871	ENSLOCG00000002680	rab12	100	87.903	Lepisosteus_oculatus
ENSPNYG00000005654	rab12	100	81.301	ENSMFAG00000043551	RAB12	100	84.553	Macaca_fascicularis
ENSPNYG00000005654	rab12	84	88.780	ENSMNEG00000040853	RAB12	88	87.892	Macaca_nemestrina
ENSPNYG00000005654	rab12	100	97.942	ENSMAMG00000006862	rab12	100	97.942	Mastacembelus_armatus
ENSPNYG00000005654	rab12	100	100.000	ENSMZEG00005024316	rab12	100	100.000	Maylandia_zebra
ENSPNYG00000005654	rab12	83	84.804	ENSMGAG00000009197	RAB12	100	88.725	Meleagris_gallopavo
ENSPNYG00000005654	rab12	93	84.141	ENSMAUG00000008371	Rab12	83	83.333	Mesocricetus_auratus
ENSPNYG00000005654	rab12	91	83.929	ENSMICG00000030661	RAB12	93	87.444	Microcebus_murinus
ENSPNYG00000005654	rab12	89	84.018	ENSMOCG00000000452	Rab12	100	87.671	Microtus_ochrogaster
ENSPNYG00000005654	rab12	93	85.022	ENSMODG00000021452	RAB12	73	84.553	Monodelphis_domestica
ENSPNYG00000005654	rab12	100	95.062	ENSMALG00000015762	rab12	100	93.827	Monopterus_albus
ENSPNYG00000005654	rab12	93	85.022	MGP_CAROLIEiJ_G0021839	Rab12	84	84.146	Mus_caroli
ENSPNYG00000005654	rab12	93	85.022	ENSMUSG00000023460	Rab12	100	84.146	Mus_musculus
ENSPNYG00000005654	rab12	93	85.022	MGP_PahariEiJ_G0020826	Rab12	100	84.146	Mus_pahari
ENSPNYG00000005654	rab12	93	85.022	MGP_SPRETEiJ_G0022750	Rab12	83	84.146	Mus_spretus
ENSPNYG00000005654	rab12	100	80.488	ENSMLUG00000002883	RAB12	92	87.892	Myotis_lucifugus
ENSPNYG00000005654	rab12	95	81.545	ENSNGAG00000024103	-	95	87.444	Nannospalax_galili
ENSPNYG00000005654	rab12	91	77.232	ENSNGAG00000019722	-	91	77.130	Nannospalax_galili
ENSPNYG00000005654	rab12	100	100.000	ENSNBRG00000014428	rab12	100	100.000	Neolamprologus_brichardi
ENSPNYG00000005654	rab12	100	80.894	ENSNLEG00000006939	RAB12	91	87.892	Nomascus_leucogenys
ENSPNYG00000005654	rab12	100	80.894	ENSMEUG00000000493	RAB12	100	84.146	Notamacropus_eugenii
ENSPNYG00000005654	rab12	89	85.388	ENSODEG00000006414	RAB12	100	89.041	Octodon_degus
ENSPNYG00000005654	rab12	100	99.588	ENSONIG00000018469	rab12	100	99.588	Oreochromis_niloticus
ENSPNYG00000005654	rab12	100	97.942	ENSORLG00000003902	rab12	100	97.942	Oryzias_latipes
ENSPNYG00000005654	rab12	100	97.531	ENSORLG00020005131	rab12	100	97.531	Oryzias_latipes_hni
ENSPNYG00000005654	rab12	100	97.531	ENSORLG00015007869	rab12	100	97.531	Oryzias_latipes_hsok
ENSPNYG00000005654	rab12	100	98.765	ENSOMEG00000008191	rab12	100	98.765	Oryzias_melastigma
ENSPNYG00000005654	rab12	86	84.762	ENSOGAG00000028002	RAB12	99	88.571	Otolemur_garnettii
ENSPNYG00000005654	rab12	79	89.529	ENSOARG00000000728	RAB12	88	87.442	Ovis_aries
ENSPNYG00000005654	rab12	84	84.541	ENSPPAG00000009152	RAB12	97	88.835	Pan_paniscus
ENSPNYG00000005654	rab12	100	80.894	ENSPPRG00000024521	RAB12	91	87.892	Panthera_pardus
ENSPNYG00000005654	rab12	100	80.894	ENSPTRG00000009853	RAB12	91	87.892	Pan_troglodytes
ENSPNYG00000005654	rab12	100	81.377	ENSPANG00000009320	RAB12	90	88.341	Papio_anubis
ENSPNYG00000005654	rab12	100	89.344	ENSPKIG00000008579	rab12	100	89.754	Paramormyrops_kingsleyae
ENSPNYG00000005654	rab12	100	89.712	ENSPMGG00000001890	rab12	100	90.947	Periophthalmus_magnuspinnatus
ENSPNYG00000005654	rab12	93	84.581	ENSPEMG00000021032	Rab12	84	83.740	Peromyscus_maniculatus_bairdii
ENSPNYG00000005654	rab12	93	84.581	ENSPCIG00000010453	RAB12	61	84.146	Phascolarctos_cinereus
ENSPNYG00000005654	rab12	100	96.311	ENSPFOG00000001579	rab12	100	96.311	Poecilia_formosa
ENSPNYG00000005654	rab12	100	96.311	ENSPLAG00000013594	rab12	100	96.311	Poecilia_latipinna
ENSPNYG00000005654	rab12	100	96.311	ENSPMEG00000010417	rab12	100	96.311	Poecilia_mexicana
ENSPNYG00000005654	rab12	100	96.721	ENSPREG00000017487	rab12	100	96.721	Poecilia_reticulata
ENSPNYG00000005654	rab12	93	84.581	ENSPPYG00000009015	-	72	84.146	Pongo_abelii
ENSPNYG00000005654	rab12	100	80.488	ENSPCAG00000015007	RAB12	100	83.740	Procavia_capensis
ENSPNYG00000005654	rab12	100	80.894	ENSPCOG00000019816	RAB12	91	87.892	Propithecus_coquereli
ENSPNYG00000005654	rab12	100	80.488	ENSPVAG00000002757	RAB12	91	87.444	Pteropus_vampyrus
ENSPNYG00000005654	rab12	100	89.024	ENSPNAG00000015031	rab12	100	89.837	Pygocentrus_nattereri
ENSPNYG00000005654	rab12	93	82.895	ENSRNOG00000019295	Rab12	100	74.297	Rattus_norvegicus
ENSPNYG00000005654	rab12	91	84.375	ENSRBIG00000028760	RAB12	96	87.892	Rhinopithecus_bieti
ENSPNYG00000005654	rab12	91	84.375	ENSRROG00000019249	RAB12	93	87.892	Rhinopithecus_roxellana
ENSPNYG00000005654	rab12	94	79.654	ENSSBOG00000021125	RAB12	80	88.517	Saimiri_boliviensis_boliviensis
ENSPNYG00000005654	rab12	93	84.071	ENSSHAG00000001489	RAB12	100	84.071	Sarcophilus_harrisii
ENSPNYG00000005654	rab12	100	96.708	ENSSMAG00000012678	rab12	100	96.708	Scophthalmus_maximus
ENSPNYG00000005654	rab12	100	98.765	ENSSDUG00000008505	rab12	100	98.765	Seriola_dumerili
ENSPNYG00000005654	rab12	100	98.765	ENSSLDG00000022239	rab12	100	98.765	Seriola_lalandi_dorsalis
ENSPNYG00000005654	rab12	100	81.301	ENSSPUG00000003222	RAB12	100	84.553	Sphenodon_punctatus
ENSPNYG00000005654	rab12	100	98.765	ENSSPAG00000010822	rab12	100	98.765	Stegastes_partitus
ENSPNYG00000005654	rab12	93	85.022	ENSSSCG00000038026	RAB12	91	88.789	Sus_scrofa
ENSPNYG00000005654	rab12	86	88.517	ENSTGUG00000009889	RAB12	89	88.341	Taeniopygia_guttata
ENSPNYG00000005654	rab12	100	93.827	ENSTRUG00000024455	rab12	100	92.593	Takifugu_rubripes
ENSPNYG00000005654	rab12	100	94.650	ENSTNIG00000014859	rab12	100	93.416	Tetraodon_nigroviridis
ENSPNYG00000005654	rab12	89	84.475	ENSTTRG00000008711	RAB12	99	88.128	Tursiops_truncatus
ENSPNYG00000005654	rab12	100	80.894	ENSUAMG00000018092	RAB12	91	87.892	Ursus_americanus
ENSPNYG00000005654	rab12	90	83.710	ENSVVUG00000011748	RAB12	99	87.330	Vulpes_vulpes
ENSPNYG00000005654	rab12	86	89.151	ENSXETG00000004289	rab12	72	89.286	Xenopus_tropicalis
ENSPNYG00000005654	rab12	100	94.672	ENSXCOG00000019310	rab12	100	95.082	Xiphophorus_couchianus
ENSPNYG00000005654	rab12	100	95.902	ENSXMAG00000023617	rab12	100	95.902	Xiphophorus_maculatus