EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000005911 (Gene tree)
Gene ID: 102202137
Gene Symbol: srprb
Alias: wu:fk57h10|zgc:111820|zgc:92746
Full Name: SRP receptor subunit beta
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 6271 bases
Position: chrJH419322.1:481919-488189
Accession: 102202137
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000007719	MMR_HSR1	PF01926.23	9.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000007909	-	3813	XM_005742099	ENSPNYP00000007719	276 (aa)	XP_005742156	UPI000329B275

Gene Model

Click here to download ENSPNYG00000005911's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000005911's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000005911	srprb	62	30.994	ENSPNYG00000020555	arf2b	87	30.994

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000005911	srprb	100	91.007	ENSAPOG00000021219	srprb	100	91.007	Acanthochromis_polyacanthus
ENSPNYG00000005911	srprb	97	94.382	ENSACIG00000014621	srprb	100	94.382	Amphilophus_citrinellus
ENSPNYG00000005911	srprb	100	91.007	ENSAOCG00000017265	srprb	100	91.007	Amphiprion_ocellaris
ENSPNYG00000005911	srprb	100	91.007	ENSAPEG00000024541	srprb	88	91.007	Amphiprion_percula
ENSPNYG00000005911	srprb	100	88.406	ENSATEG00000014016	srprb	100	88.406	Anabas_testudineus
ENSPNYG00000005911	srprb	100	100.000	ENSACLG00000016748	srprb	100	100.000	Astatotilapia_calliptera
ENSPNYG00000005911	srprb	96	72.453	ENSAMXG00000044118	srprb	99	72.453	Astyanax_mexicanus
ENSPNYG00000005911	srprb	100	86.232	ENSCSEG00000017194	srprb	100	86.232	Cynoglossus_semilaevis
ENSPNYG00000005911	srprb	96	87.547	ENSCVAG00000004221	srprb	99	87.547	Cyprinodon_variegatus
ENSPNYG00000005911	srprb	96	69.811	ENSDARG00000030949	srprb	99	69.811	Danio_rerio
ENSPNYG00000005911	srprb	97	79.775	ENSELUG00000009740	srprb	98	79.775	Esox_lucius
ENSPNYG00000005911	srprb	97	87.640	ENSFHEG00000006004	srprb	100	87.640	Fundulus_heteroclitus
ENSPNYG00000005911	srprb	99	80.147	ENSGMOG00000002081	srprb	100	80.147	Gadus_morhua
ENSPNYG00000005911	srprb	96	86.792	ENSGAFG00000012593	srprb	99	86.792	Gambusia_affinis
ENSPNYG00000005911	srprb	99	87.500	ENSGACG00000009891	srprb	100	87.500	Gasterosteus_aculeatus
ENSPNYG00000005911	srprb	100	100.000	ENSHBUG00000002145	srprb	100	100.000	Haplochromis_burtoni
ENSPNYG00000005911	srprb	98	81.852	ENSHCOG00000007732	srprb	99	81.852	Hippocampus_comes
ENSPNYG00000005911	srprb	92	69.565	ENSIPUG00000004177	srprb	94	69.565	Ictalurus_punctatus
ENSPNYG00000005911	srprb	97	83.895	ENSKMAG00000020736	srprb	100	83.895	Kryptolebias_marmoratus
ENSPNYG00000005911	srprb	100	88.406	ENSLBEG00000021483	srprb	100	88.406	Labrus_bergylta
ENSPNYG00000005911	srprb	99	70.290	ENSLOCG00000009740	srprb	92	70.652	Lepisosteus_oculatus
ENSPNYG00000005911	srprb	100	88.406	ENSMAMG00000011876	srprb	100	88.406	Mastacembelus_armatus
ENSPNYG00000005911	srprb	94	99.228	ENSMZEG00005016621	srprb	100	99.228	Maylandia_zebra
ENSPNYG00000005911	srprb	97	87.732	ENSMMOG00000012550	srprb	99	87.732	Mola_mola
ENSPNYG00000005911	srprb	100	86.957	ENSMALG00000012595	srprb	100	86.957	Monopterus_albus
ENSPNYG00000005911	srprb	75	99.515	ENSNBRG00000004699	srprb	88	99.515	Neolamprologus_brichardi
ENSPNYG00000005911	srprb	100	98.188	ENSONIG00000003788	srprb	82	98.188	Oreochromis_niloticus
ENSPNYG00000005911	srprb	99	80.220	ENSORLG00000006430	srprb	99	80.220	Oryzias_latipes
ENSPNYG00000005911	srprb	100	80.072	ENSORLG00020003413	srprb	100	80.072	Oryzias_latipes_hni
ENSPNYG00000005911	srprb	100	80.072	ENSORLG00015000166	srprb	100	80.072	Oryzias_latipes_hsok
ENSPNYG00000005911	srprb	100	81.884	ENSOMEG00000012735	srprb	100	81.884	Oryzias_melastigma
ENSPNYG00000005911	srprb	91	72.222	ENSPKIG00000013147	srprb	95	72.222	Paramormyrops_kingsleyae
ENSPNYG00000005911	srprb	100	81.884	ENSPMGG00000014061	srprb	100	81.884	Periophthalmus_magnuspinnatus
ENSPNYG00000005911	srprb	96	87.547	ENSPFOG00000011347	srprb	96	87.547	Poecilia_formosa
ENSPNYG00000005911	srprb	94	88.031	ENSPLAG00000001156	srprb	100	88.031	Poecilia_latipinna
ENSPNYG00000005911	srprb	94	87.645	ENSPMEG00000012169	srprb	100	87.645	Poecilia_mexicana
ENSPNYG00000005911	srprb	94	86.873	ENSPREG00000001449	srprb	100	86.873	Poecilia_reticulata
ENSPNYG00000005911	srprb	96	72.830	ENSPNAG00000009983	srprb	99	72.830	Pygocentrus_nattereri
ENSPNYG00000005911	srprb	92	74.902	ENSSFOG00015019355	srprb	95	74.902	Scleropages_formosus
ENSPNYG00000005911	srprb	100	87.681	ENSSMAG00000013202	srprb	100	87.681	Scophthalmus_maximus
ENSPNYG00000005911	srprb	100	90.217	ENSSDUG00000018746	srprb	94	90.217	Seriola_dumerili
ENSPNYG00000005911	srprb	100	90.580	ENSSLDG00000020560	srprb	100	90.580	Seriola_lalandi_dorsalis
ENSPNYG00000005911	srprb	100	91.007	ENSSPAG00000008898	srprb	100	91.007	Stegastes_partitus
ENSPNYG00000005911	srprb	100	84.783	ENSTRUG00000022463	srprb	100	85.870	Takifugu_rubripes
ENSPNYG00000005911	srprb	95	82.890	ENSTNIG00000007725	srprb	100	82.890	Tetraodon_nigroviridis
ENSPNYG00000005911	srprb	94	88.031	ENSXCOG00000012585	srprb	100	88.031	Xiphophorus_couchianus
ENSPNYG00000005911	srprb	94	87.645	ENSXMAG00000028725	srprb	100	87.645	Xiphophorus_maculatus