EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000006037 (Gene tree)
Gene ID: 102203654
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Minus strand
Length: 15745 bases
Position: chrJH419322.1:493357-509101
Accession: 102203654
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000007979	GTP_EFTU	PF00009.27	6.2e-63	1	1
ENSPNYP00000007951	GTP_EFTU	PF00009.27	6.4e-63	1	1
ENSPNYP00000007979	GTP_EFTU_D2	PF03144.25	8.5e-17	1	1
ENSPNYP00000007951	GTP_EFTU_D2	PF03144.25	8.6e-17	1	1
ENSPNYP00000007979	EFG_IV	PF03764.18	6.1e-38	1	1
ENSPNYP00000007951	EFG_IV	PF03764.18	6.3e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000008176	-	2217	-	ENSPNYP00000007979	738 (aa)	-	-
ENSPNYT00000008146	-	3872	XM_005742105	ENSPNYP00000007951	748 (aa)	XP_005742162	UPI0003AFF77C

Gene Model

Click here to download ENSPNYG00000006037's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000006037's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000006037	gfm1	98	32.695	ENSPNYG00000001950	gfm2	97	32.822
ENSPNYG00000006037	gfm1	74	39.597	ENSPNYG00000006476	eef2b	73	39.597
ENSPNYG00000006037	gfm1	74	38.926	ENSPNYG00000017403	-	72	38.926

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000006037	gfm1	100	80.108	ENSG00000168827	GFM1	100	93.333	Homo_sapiens
ENSPNYG00000006037	gfm1	92	89.099	ENSAPOG00000016489	gfm1	98	89.099	Acanthochromis_polyacanthus
ENSPNYG00000006037	gfm1	99	81.199	ENSAMEG00000013542	GFM1	95	82.451	Ailuropoda_melanoleuca
ENSPNYG00000006037	gfm1	99	90.177	ENSACIG00000014465	gfm1	99	86.476	Amphilophus_citrinellus
ENSPNYG00000006037	gfm1	100	89.973	ENSAOCG00000006023	gfm1	100	89.973	Amphiprion_ocellaris
ENSPNYG00000006037	gfm1	100	89.706	ENSAPEG00000024499	gfm1	100	89.706	Amphiprion_percula
ENSPNYG00000006037	gfm1	100	90.374	ENSATEG00000013789	gfm1	100	90.374	Anabas_testudineus
ENSPNYG00000006037	gfm1	98	81.241	ENSAPLG00000005022	GFM1	100	81.241	Anas_platyrhynchos
ENSPNYG00000006037	gfm1	99	79.781	ENSACAG00000006829	GFM1	99	79.781	Anolis_carolinensis
ENSPNYG00000006037	gfm1	100	80.514	ENSANAG00000035983	GFM1	100	79.494	Aotus_nancymaae
ENSPNYG00000006037	gfm1	100	99.332	ENSACLG00000016586	gfm1	100	99.332	Astatotilapia_calliptera
ENSPNYG00000006037	gfm1	99	85.890	ENSAMXG00000013435	gfm1	97	86.584	Astyanax_mexicanus
ENSPNYG00000006037	gfm1	100	80.217	ENSBTAG00000027795	GFM1	97	80.217	Bos_taurus
ENSPNYG00000006037	gfm1	95	58.345	WBGene00009246	gfm-1	95	58.006	Caenorhabditis_elegans
ENSPNYG00000006037	gfm1	100	80.920	ENSCJAG00000000363	GFM1	97	82.094	Callithrix_jacchus
ENSPNYG00000006037	gfm1	97	82.312	ENSCAFG00000009006	GFM1	100	81.953	Canis_familiaris
ENSPNYG00000006037	gfm1	97	82.312	ENSCAFG00020005878	GFM1	98	82.312	Canis_lupus_dingo
ENSPNYG00000006037	gfm1	99	80.764	ENSCHIG00000015220	GFM1	95	82.173	Capra_hircus
ENSPNYG00000006037	gfm1	100	80.108	ENSTSYG00000002013	GFM1	100	79.150	Carlito_syrichta
ENSPNYG00000006037	gfm1	99	69.946	ENSCAPG00000005699	GFM1	97	71.133	Cavia_aperea
ENSPNYG00000006037	gfm1	98	80.966	ENSCPOG00000001194	GFM1	100	78.912	Cavia_porcellus
ENSPNYG00000006037	gfm1	100	80.379	ENSCCAG00000025561	GFM1	100	79.470	Cebus_capucinus
ENSPNYG00000006037	gfm1	100	80.244	ENSCATG00000037622	GFM1	100	79.494	Cercocebus_atys
ENSPNYG00000006037	gfm1	98	80.138	ENSCLAG00000002503	GFM1	96	80.138	Chinchilla_lanigera
ENSPNYG00000006037	gfm1	100	80.244	ENSCSAG00000012162	GFM1	100	79.494	Chlorocebus_sabaeus
ENSPNYG00000006037	gfm1	100	70.955	ENSCHOG00000004867	GFM1	100	70.955	Choloepus_hoffmanni
ENSPNYG00000006037	gfm1	98	81.956	ENSCPBG00000018367	GFM1	97	81.956	Chrysemys_picta_bellii
ENSPNYG00000006037	gfm1	95	59.859	ENSCING00000011960	-	92	59.859	Ciona_intestinalis
ENSPNYG00000006037	gfm1	95	60.511	ENSCSAVG00000008514	-	99	59.687	Ciona_savignyi
ENSPNYG00000006037	gfm1	100	80.244	ENSCANG00000031714	GFM1	100	79.494	Colobus_angolensis_palliatus
ENSPNYG00000006037	gfm1	100	79.946	ENSCGRG00001022095	GFM1	100	79.122	Cricetulus_griseus_chok1gshd
ENSPNYG00000006037	gfm1	100	79.946	ENSCGRG00000012043	GFM1	100	79.122	Cricetulus_griseus_crigri
ENSPNYG00000006037	gfm1	98	83.817	ENSCSEG00000017088	gfm1	99	83.817	Cynoglossus_semilaevis
ENSPNYG00000006037	gfm1	100	92.914	ENSCVAG00000004126	gfm1	100	92.914	Cyprinodon_variegatus
ENSPNYG00000006037	gfm1	100	82.086	ENSDARG00000063624	gfm1	100	82.086	Danio_rerio
ENSPNYG00000006037	gfm1	55	79.951	ENSDNOG00000016385	-	100	79.951	Dasypus_novemcinctus
ENSPNYG00000006037	gfm1	100	78.486	ENSDORG00000014165	Gfm1	100	78.486	Dipodomys_ordii
ENSPNYG00000006037	gfm1	96	68.406	FBgn0263133	mEFG1	95	68.406	Drosophila_melanogaster
ENSPNYG00000006037	gfm1	97	73.786	ENSETEG00000019197	GFM1	95	73.786	Echinops_telfairi
ENSPNYG00000006037	gfm1	91	63.111	ENSEBUG00000012794	gfm1	100	63.111	Eptatretus_burgeri
ENSPNYG00000006037	gfm1	97	60.694	ENSEEUG00000000429	GFM1	99	60.694	Erinaceus_europaeus
ENSPNYG00000006037	gfm1	100	85.561	ENSELUG00000014728	gfm1	100	85.561	Esox_lucius
ENSPNYG00000006037	gfm1	100	80.379	ENSFCAG00000013291	GFM1	96	81.405	Felis_catus
ENSPNYG00000006037	gfm1	91	80.889	ENSFALG00000007619	GFM1	100	80.889	Ficedula_albicollis
ENSPNYG00000006037	gfm1	98	81.103	ENSFDAG00000016559	GFM1	100	78.780	Fukomys_damarensis
ENSPNYG00000006037	gfm1	100	91.845	ENSFHEG00000006091	gfm1	100	91.845	Fundulus_heteroclitus
ENSPNYG00000006037	gfm1	98	86.245	ENSGMOG00000010161	gfm1	100	86.245	Gadus_morhua
ENSPNYG00000006037	gfm1	98	81.077	ENSGALG00000009634	GFM1	98	81.077	Gallus_gallus
ENSPNYG00000006037	gfm1	100	90.508	ENSGAFG00000012527	gfm1	100	90.508	Gambusia_affinis
ENSPNYG00000006037	gfm1	100	89.453	ENSGACG00000009864	gfm1	100	89.453	Gasterosteus_aculeatus
ENSPNYG00000006037	gfm1	100	80.379	ENSGGOG00000003085	GFM1	100	79.494	Gorilla_gorilla
ENSPNYG00000006037	gfm1	100	99.465	ENSHBUG00000002120	gfm1	100	99.465	Haplochromis_burtoni
ENSPNYG00000006037	gfm1	100	79.296	ENSHGLG00000016855	GFM1	100	78.382	Heterocephalus_glaber_female
ENSPNYG00000006037	gfm1	100	79.296	ENSHGLG00100013049	GFM1	100	78.382	Heterocephalus_glaber_male
ENSPNYG00000006037	gfm1	99	90.797	ENSHCOG00000007638	gfm1	99	90.714	Hippocampus_comes
ENSPNYG00000006037	gfm1	99	85.597	ENSIPUG00000005873	gfm1	100	84.492	Ictalurus_punctatus
ENSPNYG00000006037	gfm1	99	79.026	ENSSTOG00000010150	GFM1	100	78.763	Ictidomys_tridecemlineatus
ENSPNYG00000006037	gfm1	97	81.085	ENSJJAG00000016447	Gfm1	97	80.552	Jaculus_jaculus
ENSPNYG00000006037	gfm1	100	87.567	ENSKMAG00000020768	gfm1	100	87.567	Kryptolebias_marmoratus
ENSPNYG00000006037	gfm1	95	91.155	ENSLBEG00000021315	gfm1	100	91.155	Labrus_bergylta
ENSPNYG00000006037	gfm1	99	81.583	ENSLACG00000012295	GFM1	99	81.583	Latimeria_chalumnae
ENSPNYG00000006037	gfm1	99	80.601	ENSLOCG00000003778	gfm1	100	80.601	Lepisosteus_oculatus
ENSPNYG00000006037	gfm1	100	77.943	ENSLAFG00000010945	GFM1	100	77.931	Loxodonta_africana
ENSPNYG00000006037	gfm1	100	80.244	ENSMFAG00000035731	GFM1	97	81.405	Macaca_fascicularis
ENSPNYG00000006037	gfm1	100	80.244	ENSMMUG00000004961	GFM1	97	81.405	Macaca_mulatta
ENSPNYG00000006037	gfm1	100	80.108	ENSMNEG00000033245	GFM1	100	79.361	Macaca_nemestrina
ENSPNYG00000006037	gfm1	98	79.642	ENSMLEG00000030908	GFM1	100	78.590	Mandrillus_leucophaeus
ENSPNYG00000006037	gfm1	100	91.310	ENSMAMG00000011760	gfm1	100	91.310	Mastacembelus_armatus
ENSPNYG00000006037	gfm1	100	99.465	ENSMZEG00005016639	gfm1	100	99.465	Maylandia_zebra
ENSPNYG00000006037	gfm1	98	80.939	ENSMGAG00000010641	GFM1	97	80.939	Meleagris_gallopavo
ENSPNYG00000006037	gfm1	100	80.488	ENSMAUG00000000611	Gfm1	97	81.655	Mesocricetus_auratus
ENSPNYG00000006037	gfm1	100	80.920	ENSMICG00000049086	GFM1	96	82.094	Microcebus_murinus
ENSPNYG00000006037	gfm1	97	82.197	ENSMOCG00000000465	Gfm1	96	82.197	Microtus_ochrogaster
ENSPNYG00000006037	gfm1	98	91.298	ENSMMOG00000012538	gfm1	98	91.298	Mola_mola
ENSPNYG00000006037	gfm1	98	81.354	ENSMODG00000015673	GFM1	99	80.326	Monodelphis_domestica
ENSPNYG00000006037	gfm1	98	88.721	ENSMALG00000012508	gfm1	97	88.721	Monopterus_albus
ENSPNYG00000006037	gfm1	97	82.008	MGP_CAROLIEiJ_G0025052	Gfm1	95	82.008	Mus_caroli
ENSPNYG00000006037	gfm1	97	82.008	ENSMUSG00000027774	Gfm1	95	82.008	Mus_musculus
ENSPNYG00000006037	gfm1	98	81.354	MGP_PahariEiJ_G0026495	Gfm1	97	81.241	Mus_pahari
ENSPNYG00000006037	gfm1	97	82.008	MGP_SPRETEiJ_G0025994	Gfm1	95	82.008	Mus_spretus
ENSPNYG00000006037	gfm1	100	80.514	ENSMPUG00000002859	GFM1	96	81.543	Mustela_putorius_furo
ENSPNYG00000006037	gfm1	100	80.920	ENSMLUG00000000452	GFM1	96	81.956	Myotis_lucifugus
ENSPNYG00000006037	gfm1	98	80.249	ENSNGAG00000012375	Gfm1	100	78.133	Nannospalax_galili
ENSPNYG00000006037	gfm1	99	98.901	ENSNBRG00000004631	gfm1	99	98.901	Neolamprologus_brichardi
ENSPNYG00000006037	gfm1	100	80.379	ENSNLEG00000004176	GFM1	100	79.494	Nomascus_leucogenys
ENSPNYG00000006037	gfm1	92	72.500	ENSMEUG00000007784	GFM1	99	72.500	Notamacropus_eugenii
ENSPNYG00000006037	gfm1	98	80.966	ENSOPRG00000009860	GFM1	99	80.245	Ochotona_princeps
ENSPNYG00000006037	gfm1	99	80.381	ENSODEG00000004316	GFM1	100	78.780	Octodon_degus
ENSPNYG00000006037	gfm1	100	98.396	ENSONIG00000003772	gfm1	100	98.396	Oreochromis_niloticus
ENSPNYG00000006037	gfm1	98	81.793	ENSOCUG00000013561	GFM1	97	81.731	Oryctolagus_cuniculus
ENSPNYG00000006037	gfm1	96	91.243	ENSORLG00000006487	gfm1	100	91.243	Oryzias_latipes
ENSPNYG00000006037	gfm1	100	89.840	ENSORLG00020003362	gfm1	100	89.840	Oryzias_latipes_hni
ENSPNYG00000006037	gfm1	100	89.973	ENSORLG00015005829	gfm1	100	89.973	Oryzias_latipes_hsok
ENSPNYG00000006037	gfm1	100	91.979	ENSOMEG00000012894	gfm1	100	91.979	Oryzias_melastigma
ENSPNYG00000006037	gfm1	100	79.702	ENSOGAG00000008298	GFM1	96	80.854	Otolemur_garnettii
ENSPNYG00000006037	gfm1	97	81.276	ENSOARG00000002409	GFM1	99	81.276	Ovis_aries
ENSPNYG00000006037	gfm1	100	80.379	ENSPPAG00000033881	GFM1	100	79.494	Pan_paniscus
ENSPNYG00000006037	gfm1	100	80.379	ENSPPRG00000009281	GFM1	96	81.405	Panthera_pardus
ENSPNYG00000006037	gfm1	100	80.244	ENSPTIG00000012416	GFM1	96	81.267	Panthera_tigris_altaica
ENSPNYG00000006037	gfm1	100	80.379	ENSPTRG00000015570	GFM1	100	79.494	Pan_troglodytes
ENSPNYG00000006037	gfm1	100	80.108	ENSPANG00000016512	GFM1	100	79.361	Papio_anubis
ENSPNYG00000006037	gfm1	100	83.155	ENSPKIG00000004876	gfm1	100	83.155	Paramormyrops_kingsleyae
ENSPNYG00000006037	gfm1	98	82.920	ENSPSIG00000012567	GFM1	97	82.920	Pelodiscus_sinensis
ENSPNYG00000006037	gfm1	98	88.138	ENSPMGG00000014068	gfm1	100	88.138	Periophthalmus_magnuspinnatus
ENSPNYG00000006037	gfm1	100	80.081	ENSPEMG00000008942	Gfm1	100	79.228	Peromyscus_maniculatus_bairdii
ENSPNYG00000006037	gfm1	88	77.301	ENSPCIG00000020195	GFM1	98	79.332	Phascolarctos_cinereus
ENSPNYG00000006037	gfm1	100	91.310	ENSPFOG00000011022	gfm1	100	91.310	Poecilia_formosa
ENSPNYG00000006037	gfm1	98	92.403	ENSPLAG00000019585	gfm1	100	90.871	Poecilia_latipinna
ENSPNYG00000006037	gfm1	100	91.176	ENSPMEG00000012376	gfm1	100	91.176	Poecilia_mexicana
ENSPNYG00000006037	gfm1	100	91.043	ENSPREG00000001332	gfm1	95	91.043	Poecilia_reticulata
ENSPNYG00000006037	gfm1	100	80.108	ENSPPYG00000014244	GFM1	100	79.228	Pongo_abelii
ENSPNYG00000006037	gfm1	95	80.085	ENSPCAG00000008934	GFM1	100	80.085	Procavia_capensis
ENSPNYG00000006037	gfm1	98	81.517	ENSPCOG00000022259	GFM1	96	81.517	Propithecus_coquereli
ENSPNYG00000006037	gfm1	100	79.973	ENSPVAG00000013605	GFM1	96	80.992	Pteropus_vampyrus
ENSPNYG00000006037	gfm1	98	86.584	ENSPNAG00000001237	gfm1	100	84.492	Pygocentrus_nattereri
ENSPNYG00000006037	gfm1	100	80.217	ENSRNOG00000012873	Gfm1	97	80.217	Rattus_norvegicus
ENSPNYG00000006037	gfm1	100	80.108	ENSRBIG00000031363	GFM1	100	79.361	Rhinopithecus_bieti
ENSPNYG00000006037	gfm1	100	80.244	ENSRROG00000031081	GFM1	100	79.494	Rhinopithecus_roxellana
ENSPNYG00000006037	gfm1	96	55.602	YLR069C	-	94	55.602	Saccharomyces_cerevisiae
ENSPNYG00000006037	gfm1	100	80.650	ENSSBOG00000023252	GFM1	97	81.818	Saimiri_boliviensis_boliviensis
ENSPNYG00000006037	gfm1	98	82.434	ENSSHAG00000017772	GFM1	99	81.411	Sarcophilus_harrisii
ENSPNYG00000006037	gfm1	100	83.445	ENSSFOG00015003117	gfm1	100	83.445	Scleropages_formosus
ENSPNYG00000006037	gfm1	100	89.171	ENSSMAG00000013221	gfm1	100	89.171	Scophthalmus_maximus
ENSPNYG00000006037	gfm1	100	92.781	ENSSDUG00000018665	gfm1	100	92.781	Seriola_dumerili
ENSPNYG00000006037	gfm1	100	92.647	ENSSLDG00000020606	gfm1	100	92.647	Seriola_lalandi_dorsalis
ENSPNYG00000006037	gfm1	98	79.558	ENSSPUG00000018686	GFM1	98	79.558	Sphenodon_punctatus
ENSPNYG00000006037	gfm1	100	92.914	ENSSPAG00000008800	gfm1	100	92.914	Stegastes_partitus
ENSPNYG00000006037	gfm1	99	80.218	ENSSSCG00000025651	GFM1	95	81.616	Sus_scrofa
ENSPNYG00000006037	gfm1	100	87.567	ENSTRUG00000009244	gfm1	100	87.567	Takifugu_rubripes
ENSPNYG00000006037	gfm1	100	89.973	ENSTNIG00000007729	gfm1	100	89.973	Tetraodon_nigroviridis
ENSPNYG00000006037	gfm1	91	73.333	ENSTBEG00000017404	GFM1	89	73.333	Tupaia_belangeri
ENSPNYG00000006037	gfm1	99	80.491	ENSTTRG00000001735	GFM1	95	81.894	Tursiops_truncatus
ENSPNYG00000006037	gfm1	99	81.063	ENSUAMG00000026381	GFM1	96	81.680	Ursus_americanus
ENSPNYG00000006037	gfm1	99	81.063	ENSUMAG00000011268	GFM1	96	81.680	Ursus_maritimus
ENSPNYG00000006037	gfm1	100	76.965	ENSVPAG00000009444	GFM1	96	78.069	Vicugna_pacos
ENSPNYG00000006037	gfm1	99	81.070	ENSVVUG00000020091	GFM1	100	81.657	Vulpes_vulpes
ENSPNYG00000006037	gfm1	100	81.782	ENSXETG00000032551	GFM1	100	81.782	Xenopus_tropicalis
ENSPNYG00000006037	gfm1	54	89.136	ENSXCOG00000012590	gfm1	93	89.136	Xiphophorus_couchianus
ENSPNYG00000006037	gfm1	100	90.909	ENSXMAG00000000261	gfm1	100	90.909	Xiphophorus_maculatus