EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000006164 (Gene tree)
Gene ID: 102213588
Gene Symbol: mtrex
Alias: julie|mtrex|skiv2l2|wu:fd11a05|zgc:63838
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 16409 bases
Position: chrJH419207.1:6672978-6689386
Accession: 102213588
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000008099	rRNA_proc-arch	PF13234.6	1.4e-87	1	1
ENSPNYP00000008133	rRNA_proc-arch	PF13234.6	1e-84	1	1
ENSPNYP00000008133	DEAD	PF00270.29	7e-17	1	1
ENSPNYP00000008099	DEAD	PF00270.29	7.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000008298	-	3606	XM_005720308	ENSPNYP00000008099	1037 (aa)	XP_005720365	UPI0003AFE027
ENSPNYT00000008332	-	3012	-	ENSPNYP00000008133	1003 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000006164's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000006164's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000006164	mtrex	89	35.220	ENSPNYG00000017853	skiv2l	80	35.036

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000006164	mtrex	100	82.364	ENSG00000039123	MTREX	100	82.364	Homo_sapiens
ENSPNYG00000006164	mtrex	100	94.407	ENSAPOG00000007814	mtrex	100	94.407	Acanthochromis_polyacanthus
ENSPNYG00000006164	mtrex	100	82.588	ENSAMEG00000013856	MTREX	100	82.493	Ailuropoda_melanoleuca
ENSPNYG00000006164	mtrex	100	92.093	ENSACIG00000015117	mtrex	100	92.093	Amphilophus_citrinellus
ENSPNYG00000006164	mtrex	100	94.600	ENSAOCG00000011884	mtrex	100	94.600	Amphiprion_ocellaris
ENSPNYG00000006164	mtrex	100	94.407	ENSAPEG00000019384	mtrex	100	94.407	Amphiprion_percula
ENSPNYG00000006164	mtrex	100	94.696	ENSATEG00000015117	mtrex	100	94.793	Anabas_testudineus
ENSPNYG00000006164	mtrex	94	85.904	ENSAPLG00000009694	MTREX	98	85.802	Anas_platyrhynchos
ENSPNYG00000006164	mtrex	100	83.062	ENSACAG00000015200	MTREX	96	82.967	Anolis_carolinensis
ENSPNYG00000006164	mtrex	100	82.824	ENSANAG00000023095	MTREX	100	82.729	Aotus_nancymaae
ENSPNYG00000006164	mtrex	100	99.904	ENSACLG00000001921	mtrex	100	99.904	Astatotilapia_calliptera
ENSPNYG00000006164	mtrex	95	86.829	ENSAMXG00000018751	mtrex	99	87.247	Astyanax_mexicanus
ENSPNYG00000006164	mtrex	100	82.555	ENSBTAG00000010518	MTREX	100	82.459	Bos_taurus
ENSPNYG00000006164	mtrex	91	53.609	WBGene00012342	mtr-4	91	53.469	Caenorhabditis_elegans
ENSPNYG00000006164	mtrex	100	81.973	ENSCJAG00000001773	MTREX	100	81.973	Callithrix_jacchus
ENSPNYG00000006164	mtrex	100	82.634	ENSCAFG00000006818	MTREX	100	82.571	Canis_familiaris
ENSPNYG00000006164	mtrex	100	82.634	ENSCAFG00020024352	MTREX	100	82.571	Canis_lupus_dingo
ENSPNYG00000006164	mtrex	100	82.493	ENSCHIG00000024413	MTREX	100	82.398	Capra_hircus
ENSPNYG00000006164	mtrex	93	83.662	ENSTSYG00000007389	MTREX	100	83.662	Carlito_syrichta
ENSPNYG00000006164	mtrex	86	75.342	ENSCAPG00000008696	MTREX	95	75.114	Cavia_aperea
ENSPNYG00000006164	mtrex	100	82.555	ENSCPOG00000009797	MTREX	100	82.571	Cavia_porcellus
ENSPNYG00000006164	mtrex	100	82.729	ENSCCAG00000014177	MTREX	100	82.555	Cebus_capucinus
ENSPNYG00000006164	mtrex	100	82.555	ENSCATG00000042153	MTREX	100	82.459	Cercocebus_atys
ENSPNYG00000006164	mtrex	100	82.634	ENSCLAG00000006622	MTREX	100	82.571	Chinchilla_lanigera
ENSPNYG00000006164	mtrex	100	78.897	ENSCSAG00000016445	MTREX	100	78.802	Chlorocebus_sabaeus
ENSPNYG00000006164	mtrex	61	97.222	ENSCHOG00000010936	-	62	97.222	Choloepus_hoffmanni
ENSPNYG00000006164	mtrex	100	83.670	ENSCPBG00000026551	MTREX	94	83.573	Chrysemys_picta_bellii
ENSPNYG00000006164	mtrex	99	65.134	ENSCING00000003239	-	99	65.326	Ciona_intestinalis
ENSPNYG00000006164	mtrex	99	64.265	ENSCSAVG00000009304	-	99	69.173	Ciona_savignyi
ENSPNYG00000006164	mtrex	100	82.824	ENSCANG00000035770	MTREX	100	82.729	Colobus_angolensis_palliatus
ENSPNYG00000006164	mtrex	100	82.745	ENSCGRG00001024680	Mtrex	100	82.650	Cricetulus_griseus_chok1gshd
ENSPNYG00000006164	mtrex	100	82.745	ENSCGRG00000000307	Mtrex	100	82.650	Cricetulus_griseus_crigri
ENSPNYG00000006164	mtrex	100	93.057	ENSCSEG00000018621	mtrex	98	93.346	Cynoglossus_semilaevis
ENSPNYG00000006164	mtrex	100	93.346	ENSCVAG00000004556	mtrex	100	93.346	Cyprinodon_variegatus
ENSPNYG00000006164	mtrex	100	87.175	ENSDARG00000013457	mtrex	100	87.078	Danio_rerio
ENSPNYG00000006164	mtrex	100	82.700	ENSDNOG00000015375	MTREX	100	82.605	Dasypus_novemcinctus
ENSPNYG00000006164	mtrex	100	82.920	ENSDORG00000006782	Mtrex	100	82.952	Dipodomys_ordii
ENSPNYG00000006164	mtrex	98	62.829	FBgn0001986	Mtr4	96	62.391	Drosophila_melanogaster
ENSPNYG00000006164	mtrex	90	66.977	ENSETEG00000000727	MTREX	90	66.977	Echinops_telfairi
ENSPNYG00000006164	mtrex	99	73.340	ENSEBUG00000012869	mtrex	99	73.244	Eptatretus_burgeri
ENSPNYG00000006164	mtrex	100	82.555	ENSEASG00005013270	MTREX	100	82.650	Equus_asinus_asinus
ENSPNYG00000006164	mtrex	100	82.650	ENSECAG00000023723	MTREX	100	88.837	Equus_caballus
ENSPNYG00000006164	mtrex	93	84.718	ENSEEUG00000000527	MTREX	94	84.452	Erinaceus_europaeus
ENSPNYG00000006164	mtrex	98	87.683	ENSELUG00000004898	mtrex	100	91.396	Esox_lucius
ENSPNYG00000006164	mtrex	100	82.857	ENSFCAG00000010575	MTREX	100	82.762	Felis_catus
ENSPNYG00000006164	mtrex	100	82.263	ENSFALG00000010850	MTREX	100	82.263	Ficedula_albicollis
ENSPNYG00000006164	mtrex	100	82.218	ENSFDAG00000011199	MTREX	100	82.122	Fukomys_damarensis
ENSPNYG00000006164	mtrex	100	93.539	ENSFHEG00000023014	mtrex	100	90.568	Fundulus_heteroclitus
ENSPNYG00000006164	mtrex	100	86.141	ENSGMOG00000014702	mtrex	100	86.167	Gadus_morhua
ENSPNYG00000006164	mtrex	100	82.755	ENSGALG00000014709	MTREX	86	82.659	Gallus_gallus
ENSPNYG00000006164	mtrex	100	93.443	ENSGAFG00000012425	mtrex	100	93.443	Gambusia_affinis
ENSPNYG00000006164	mtrex	100	86.616	ENSGACG00000016260	mtrex	99	91.630	Gasterosteus_aculeatus
ENSPNYG00000006164	mtrex	100	83.189	ENSGAGG00000020036	MTREX	100	83.093	Gopherus_agassizii
ENSPNYG00000006164	mtrex	100	82.364	ENSGGOG00000001867	MTREX	100	82.364	Gorilla_gorilla
ENSPNYG00000006164	mtrex	100	99.904	ENSHBUG00000006229	mtrex	100	99.904	Haplochromis_burtoni
ENSPNYG00000006164	mtrex	100	82.459	ENSHGLG00000019445	SKIV2L2	100	82.505	Heterocephalus_glaber_female
ENSPNYG00000006164	mtrex	100	82.459	ENSHGLG00100011833	SKIV2L2	100	82.505	Heterocephalus_glaber_male
ENSPNYG00000006164	mtrex	92	90.418	ENSHCOG00000019995	mtrex	100	90.418	Hippocampus_comes
ENSPNYG00000006164	mtrex	100	85.549	ENSIPUG00000024348	skiv2l2	100	85.852	Ictalurus_punctatus
ENSPNYG00000006164	mtrex	100	82.381	ENSSTOG00000010802	MTREX	100	82.381	Ictidomys_tridecemlineatus
ENSPNYG00000006164	mtrex	100	78.386	ENSJJAG00000020975	Mtrex	100	78.194	Jaculus_jaculus
ENSPNYG00000006164	mtrex	100	93.732	ENSKMAG00000012642	mtrex	100	93.732	Kryptolebias_marmoratus
ENSPNYG00000006164	mtrex	100	94.021	ENSLBEG00000019367	mtrex	100	94.021	Labrus_bergylta
ENSPNYG00000006164	mtrex	100	84.534	ENSLACG00000009075	MTREX	100	84.534	Latimeria_chalumnae
ENSPNYG00000006164	mtrex	100	86.455	ENSLOCG00000010186	mtrex	100	86.455	Lepisosteus_oculatus
ENSPNYG00000006164	mtrex	99	80.707	ENSLAFG00000010497	MTREX	100	80.553	Loxodonta_africana
ENSPNYG00000006164	mtrex	100	82.555	ENSMFAG00000031610	MTREX	100	82.459	Macaca_fascicularis
ENSPNYG00000006164	mtrex	100	82.762	ENSMMUG00000010379	MTREX	100	82.667	Macaca_mulatta
ENSPNYG00000006164	mtrex	100	82.555	ENSMNEG00000032746	MTREX	100	82.459	Macaca_nemestrina
ENSPNYG00000006164	mtrex	100	82.555	ENSMLEG00000041051	MTREX	100	82.459	Mandrillus_leucophaeus
ENSPNYG00000006164	mtrex	100	91.610	ENSMAMG00000016753	mtrex	98	95.391	Mastacembelus_armatus
ENSPNYG00000006164	mtrex	100	99.904	ENSMZEG00005000414	mtrex	100	99.904	Maylandia_zebra
ENSPNYG00000006164	mtrex	95	61.972	ENSMGAG00000003980	MTREX	99	61.670	Meleagris_gallopavo
ENSPNYG00000006164	mtrex	100	82.745	ENSMAUG00000010727	Mtrex	100	82.650	Mesocricetus_auratus
ENSPNYG00000006164	mtrex	100	82.841	ENSMICG00000012779	MTREX	100	82.920	Microcebus_murinus
ENSPNYG00000006164	mtrex	100	82.476	ENSMOCG00000019886	Mtrex	100	82.381	Microtus_ochrogaster
ENSPNYG00000006164	mtrex	100	90.173	ENSMMOG00000002476	mtrex	100	90.173	Mola_mola
ENSPNYG00000006164	mtrex	100	83.285	ENSMODG00000019494	MTREX	100	83.189	Monodelphis_domestica
ENSPNYG00000006164	mtrex	100	82.081	ENSMALG00000002917	mtrex	98	89.938	Monopterus_albus
ENSPNYG00000006164	mtrex	100	82.505	MGP_CAROLIEiJ_G0018896	Mtrex	100	82.505	Mus_caroli
ENSPNYG00000006164	mtrex	100	82.122	ENSMUSG00000016018	Mtrex	100	82.235	Mus_musculus
ENSPNYG00000006164	mtrex	100	82.122	MGP_PahariEiJ_G0015967	Mtrex	100	82.235	Mus_pahari
ENSPNYG00000006164	mtrex	100	82.122	MGP_SPRETEiJ_G0019775	Mtrex	100	82.235	Mus_spretus
ENSPNYG00000006164	mtrex	100	82.634	ENSMPUG00000007619	MTREX	100	82.667	Mustela_putorius_furo
ENSPNYG00000006164	mtrex	100	82.000	ENSMLUG00000001152	MTREX	100	82.000	Myotis_lucifugus
ENSPNYG00000006164	mtrex	100	82.824	ENSNGAG00000011938	Mtrex	100	82.729	Nannospalax_galili
ENSPNYG00000006164	mtrex	100	99.711	ENSNBRG00000011293	mtrex	100	99.711	Neolamprologus_brichardi
ENSPNYG00000006164	mtrex	100	78.762	ENSNLEG00000001494	MTREX	100	78.306	Nomascus_leucogenys
ENSPNYG00000006164	mtrex	83	94.118	ENSMEUG00000006496	-	83	94.118	Notamacropus_eugenii
ENSPNYG00000006164	mtrex	100	69.665	ENSOPRG00000008009	MTREX	100	69.790	Ochotona_princeps
ENSPNYG00000006164	mtrex	100	82.061	ENSODEG00000017234	MTREX	100	82.095	Octodon_degus
ENSPNYG00000006164	mtrex	100	99.325	ENSONIG00000007587	mtrex	100	99.325	Oreochromis_niloticus
ENSPNYG00000006164	mtrex	50	82.592	ENSOANG00000004885	-	99	82.398	Ornithorhynchus_anatinus
ENSPNYG00000006164	mtrex	100	83.078	ENSOCUG00000004463	MTREX	100	82.983	Oryctolagus_cuniculus
ENSPNYG00000006164	mtrex	100	92.382	ENSORLG00000005443	mtrex	100	92.478	Oryzias_latipes
ENSPNYG00000006164	mtrex	100	92.382	ENSORLG00020006329	mtrex	100	92.478	Oryzias_latipes_hni
ENSPNYG00000006164	mtrex	100	92.285	ENSORLG00015012924	mtrex	100	92.382	Oryzias_latipes_hsok
ENSPNYG00000006164	mtrex	100	92.782	ENSOMEG00000008825	mtrex	100	92.493	Oryzias_melastigma
ENSPNYG00000006164	mtrex	100	82.824	ENSOGAG00000002886	MTREX	100	82.538	Otolemur_garnettii
ENSPNYG00000006164	mtrex	100	82.258	ENSOARG00000007764	MTREX	100	82.163	Ovis_aries
ENSPNYG00000006164	mtrex	100	82.538	ENSPPAG00000039291	MTREX	100	82.364	Pan_paniscus
ENSPNYG00000006164	mtrex	100	82.857	ENSPPRG00000019701	MTREX	100	82.762	Panthera_pardus
ENSPNYG00000006164	mtrex	100	81.429	ENSPTIG00000009313	MTREX	100	81.333	Panthera_tigris_altaica
ENSPNYG00000006164	mtrex	100	82.538	ENSPTRG00000016878	MTREX	100	82.364	Pan_troglodytes
ENSPNYG00000006164	mtrex	100	82.459	ENSPANG00000009697	MTREX	100	82.364	Papio_anubis
ENSPNYG00000006164	mtrex	100	85.413	ENSPKIG00000020833	mtrex	100	85.317	Paramormyrops_kingsleyae
ENSPNYG00000006164	mtrex	100	82.370	ENSPSIG00000012150	MTREX	100	83.670	Pelodiscus_sinensis
ENSPNYG00000006164	mtrex	100	89.499	ENSPMGG00000002582	mtrex	100	89.499	Periophthalmus_magnuspinnatus
ENSPNYG00000006164	mtrex	95	64.854	ENSPMAG00000009668	mtrex	100	64.789	Petromyzon_marinus
ENSPNYG00000006164	mtrex	93	86.272	ENSPCIG00000024730	MTREX	100	87.093	Phascolarctos_cinereus
ENSPNYG00000006164	mtrex	76	94.670	ENSPFOG00000003141	mtrex	100	94.670	Poecilia_formosa
ENSPNYG00000006164	mtrex	100	93.346	ENSPLAG00000021311	mtrex	100	93.346	Poecilia_latipinna
ENSPNYG00000006164	mtrex	93	94.910	ENSPMEG00000010597	mtrex	99	94.910	Poecilia_mexicana
ENSPNYG00000006164	mtrex	100	93.250	ENSPREG00000003089	mtrex	100	93.250	Poecilia_reticulata
ENSPNYG00000006164	mtrex	98	82.074	ENSPPYG00000015469	MTREX	98	82.074	Pongo_abelii
ENSPNYG00000006164	mtrex	94	73.023	ENSPCAG00000013120	MTREX	94	73.023	Procavia_capensis
ENSPNYG00000006164	mtrex	99	77.277	ENSPCOG00000018092	MTREX	100	77.173	Propithecus_coquereli
ENSPNYG00000006164	mtrex	100	82.745	ENSPVAG00000002445	MTREX	100	82.667	Pteropus_vampyrus
ENSPNYG00000006164	mtrex	100	87.488	ENSPNAG00000008794	mtrex	100	87.584	Pygocentrus_nattereri
ENSPNYG00000006164	mtrex	99	82.126	ENSRNOG00000010125	Mtrex	97	81.609	Rattus_norvegicus
ENSPNYG00000006164	mtrex	100	81.011	ENSRBIG00000034930	MTREX	100	80.916	Rhinopithecus_bieti
ENSPNYG00000006164	mtrex	100	82.634	ENSRROG00000039895	MTREX	100	82.538	Rhinopithecus_roxellana
ENSPNYG00000006164	mtrex	91	54.927	YJL050W	MTR4	95	52.536	Saccharomyces_cerevisiae
ENSPNYG00000006164	mtrex	100	82.824	ENSSBOG00000026693	MTREX	100	82.952	Saimiri_boliviensis_boliviensis
ENSPNYG00000006164	mtrex	95	85.497	ENSSHAG00000004600	MTREX	98	85.396	Sarcophilus_harrisii
ENSPNYG00000006164	mtrex	100	86.551	ENSSFOG00015014355	skiv2l2	100	86.551	Scleropages_formosus
ENSPNYG00000006164	mtrex	100	93.828	ENSSMAG00000007572	mtrex	100	93.828	Scophthalmus_maximus
ENSPNYG00000006164	mtrex	100	95.275	ENSSDUG00000023789	mtrex	100	95.275	Seriola_dumerili
ENSPNYG00000006164	mtrex	100	95.371	ENSSLDG00000006301	mtrex	100	95.371	Seriola_lalandi_dorsalis
ENSPNYG00000006164	mtrex	93	86.435	ENSSARG00000008387	MTREX	100	81.333	Sorex_araneus
ENSPNYG00000006164	mtrex	90	84.577	ENSSPUG00000007071	MTREX	96	85.572	Sphenodon_punctatus
ENSPNYG00000006164	mtrex	100	90.972	ENSSPAG00000011319	mtrex	100	91.070	Stegastes_partitus
ENSPNYG00000006164	mtrex	100	82.683	ENSSSCG00000016911	MTREX	100	82.588	Sus_scrofa
ENSPNYG00000006164	mtrex	100	82.037	ENSTGUG00000002480	MTREX	100	81.940	Taeniopygia_guttata
ENSPNYG00000006164	mtrex	100	91.418	ENSTRUG00000014571	mtrex	100	91.418	Takifugu_rubripes
ENSPNYG00000006164	mtrex	100	67.969	ENSTBEG00000007769	MTREX	100	68.034	Tupaia_belangeri
ENSPNYG00000006164	mtrex	100	82.696	ENSTTRG00000008678	MTREX	100	82.600	Tursiops_truncatus
ENSPNYG00000006164	mtrex	100	82.443	ENSUAMG00000023061	MTREX	100	82.571	Ursus_americanus
ENSPNYG00000006164	mtrex	100	82.709	ENSUMAG00000009373	MTREX	99	87.671	Ursus_maritimus
ENSPNYG00000006164	mtrex	100	73.669	ENSVPAG00000011174	MTREX	100	73.289	Vicugna_pacos
ENSPNYG00000006164	mtrex	100	82.729	ENSVVUG00000021337	MTREX	100	82.667	Vulpes_vulpes
ENSPNYG00000006164	mtrex	100	84.601	ENSXETG00000032798	MTREX	100	84.504	Xenopus_tropicalis
ENSPNYG00000006164	mtrex	100	93.828	ENSXMAG00000004799	mtrex	100	93.828	Xiphophorus_maculatus