EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNYG00000006659 (Gene tree)
Gene ID: 102196947
Gene Symbol: rabl3
Alias: fb40b02|wu:fb40b02|zgc:100876
Full Name: RAB%2C member of RAS oncogene family like 3
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 3746 bases
Position: chrJH419340.1:1658386-1662131
Accession: 102196947
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000008773	MMR_HSR1	PF01926.23	5.5e-06	1	1
ENSPNYP00000008759	MMR_HSR1	PF01926.23	6.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000008967	-	1454	XM_005743766	ENSPNYP00000008759	233 (aa)	XP_005743823	UPI0003AFEFC7
ENSPNYT00000008981	-	618	-	ENSPNYP00000008773	205 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000006659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000006659's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNYG00000006659	rabl3	59	31.405	ENSPNYG00000019276	-	53	31.405
ENSPNYG00000006659	rabl3	59	32.231	ENSPNYG00000015774	RAB39B	53	32.231

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000006659	rabl3	100	85.593	ENSG00000144840	RABL3	100	92.248	Homo_sapiens
ENSPNYG00000006659	rabl3	100	98.291	ENSAPOG00000024479	rabl3	100	98.291	Acanthochromis_polyacanthus
ENSPNYG00000006659	rabl3	100	86.441	ENSAMEG00000004809	RABL3	100	86.441	Ailuropoda_melanoleuca
ENSPNYG00000006659	rabl3	100	93.562	ENSACIG00000014343	rabl3	100	93.562	Amphilophus_citrinellus
ENSPNYG00000006659	rabl3	100	98.291	ENSAOCG00000011851	rabl3	100	98.291	Amphiprion_ocellaris
ENSPNYG00000006659	rabl3	100	98.291	ENSAPEG00000011214	rabl3	100	98.291	Amphiprion_percula
ENSPNYG00000006659	rabl3	100	97.854	ENSATEG00000003503	rabl3	100	97.854	Anabas_testudineus
ENSPNYG00000006659	rabl3	100	80.932	ENSACAG00000011313	-	100	80.932	Anolis_carolinensis
ENSPNYG00000006659	rabl3	100	87.712	ENSANAG00000027278	RABL3	100	87.712	Aotus_nancymaae
ENSPNYG00000006659	rabl3	100	99.571	ENSACLG00000009820	rabl3	100	99.571	Astatotilapia_calliptera
ENSPNYG00000006659	rabl3	100	94.421	ENSAMXG00000038716	rabl3	100	94.421	Astyanax_mexicanus
ENSPNYG00000006659	rabl3	100	88.136	ENSBTAG00000015898	RABL3	100	88.136	Bos_taurus
ENSPNYG00000006659	rabl3	100	87.712	ENSCJAG00000008611	RABL3	100	87.712	Callithrix_jacchus
ENSPNYG00000006659	rabl3	100	87.288	ENSCAFG00000011292	RABL3	89	87.288	Canis_familiaris
ENSPNYG00000006659	rabl3	100	87.288	ENSCAFG00020006397	RABL3	100	87.288	Canis_lupus_dingo
ENSPNYG00000006659	rabl3	100	88.136	ENSCHIG00000017365	RABL3	100	88.136	Capra_hircus
ENSPNYG00000006659	rabl3	100	86.017	ENSCPOG00000009645	RABL3	100	86.017	Cavia_porcellus
ENSPNYG00000006659	rabl3	100	86.017	ENSCATG00000032561	RABL3	100	86.017	Cercocebus_atys
ENSPNYG00000006659	rabl3	100	85.593	ENSCLAG00000010855	RABL3	100	85.593	Chinchilla_lanigera
ENSPNYG00000006659	rabl3	99	85.837	ENSCSAG00000007155	RABL3	100	85.837	Chlorocebus_sabaeus
ENSPNYG00000006659	rabl3	100	86.441	ENSCPBG00000001999	RABL3	100	86.441	Chrysemys_picta_bellii
ENSPNYG00000006659	rabl3	100	86.017	ENSCANG00000031684	RABL3	100	86.017	Colobus_angolensis_palliatus
ENSPNYG00000006659	rabl3	100	83.475	ENSCGRG00001021537	Rabl3	100	83.475	Cricetulus_griseus_chok1gshd
ENSPNYG00000006659	rabl3	100	83.475	ENSCGRG00000002114	Rabl3	100	83.475	Cricetulus_griseus_crigri
ENSPNYG00000006659	rabl3	100	90.952	ENSCSEG00000014982	rabl3	100	90.952	Cynoglossus_semilaevis
ENSPNYG00000006659	rabl3	100	91.707	ENSCVAG00000009904	rabl3	100	91.707	Cyprinodon_variegatus
ENSPNYG00000006659	rabl3	100	93.991	ENSDARG00000040959	rabl3	100	93.991	Danio_rerio
ENSPNYG00000006659	rabl3	100	86.017	ENSDNOG00000008174	RABL3	100	86.017	Dasypus_novemcinctus
ENSPNYG00000006659	rabl3	100	85.593	ENSETEG00000010206	RABL3	100	85.593	Echinops_telfairi
ENSPNYG00000006659	rabl3	100	87.712	ENSECAG00000023059	RABL3	100	87.712	Equus_caballus
ENSPNYG00000006659	rabl3	100	81.780	ENSEEUG00000002897	RABL3	100	81.780	Erinaceus_europaeus
ENSPNYG00000006659	rabl3	100	93.991	ENSELUG00000014758	rabl3	100	93.991	Esox_lucius
ENSPNYG00000006659	rabl3	100	87.288	ENSFCAG00000031879	RABL3	100	83.491	Felis_catus
ENSPNYG00000006659	rabl3	100	84.322	ENSFALG00000005296	RABL3	100	84.322	Ficedula_albicollis
ENSPNYG00000006659	rabl3	100	86.383	ENSFDAG00000000307	RABL3	100	86.383	Fukomys_damarensis
ENSPNYG00000006659	rabl3	100	94.421	ENSFHEG00000011273	rabl3	100	94.421	Fundulus_heteroclitus
ENSPNYG00000006659	rabl3	100	94.850	ENSGMOG00000007845	rabl3	100	94.850	Gadus_morhua
ENSPNYG00000006659	rabl3	100	85.593	ENSGALG00000014949	RABL3	100	85.593	Gallus_gallus
ENSPNYG00000006659	rabl3	100	93.991	ENSGAFG00000015953	rabl3	100	93.991	Gambusia_affinis
ENSPNYG00000006659	rabl3	100	93.991	ENSGACG00000007387	rabl3	100	94.574	Gasterosteus_aculeatus
ENSPNYG00000006659	rabl3	100	86.864	ENSGAGG00000003677	RABL3	100	86.864	Gopherus_agassizii
ENSPNYG00000006659	rabl3	100	85.593	ENSGGOG00000006059	RABL3	100	85.593	Gorilla_gorilla
ENSPNYG00000006659	rabl3	100	100.000	ENSHBUG00000019478	rabl3	93	100.000	Haplochromis_burtoni
ENSPNYG00000006659	rabl3	100	86.383	ENSHGLG00000014491	RABL3	100	86.383	Heterocephalus_glaber_female
ENSPNYG00000006659	rabl3	100	86.383	ENSHGLG00100004866	RABL3	100	86.383	Heterocephalus_glaber_male
ENSPNYG00000006659	rabl3	100	94.146	ENSHCOG00000019245	rabl3	100	94.146	Hippocampus_comes
ENSPNYG00000006659	rabl3	100	92.275	ENSIPUG00000012657	rabl3	100	92.275	Ictalurus_punctatus
ENSPNYG00000006659	rabl3	100	85.593	ENSSTOG00000019452	RABL3	100	85.593	Ictidomys_tridecemlineatus
ENSPNYG00000006659	rabl3	100	82.547	ENSJJAG00000023553	Rabl3	100	82.547	Jaculus_jaculus
ENSPNYG00000006659	rabl3	100	90.987	ENSKMAG00000015464	rabl3	100	90.987	Kryptolebias_marmoratus
ENSPNYG00000006659	rabl3	100	97.436	ENSLBEG00000020595	rabl3	100	97.436	Labrus_bergylta
ENSPNYG00000006659	rabl3	100	97.436	ENSLBEG00000010627	-	100	97.436	Labrus_bergylta
ENSPNYG00000006659	rabl3	100	88.559	ENSLOCG00000006265	rabl3	100	88.559	Lepisosteus_oculatus
ENSPNYG00000006659	rabl3	100	86.864	ENSLAFG00000003711	RABL3	100	86.864	Loxodonta_africana
ENSPNYG00000006659	rabl3	100	86.017	ENSMFAG00000031923	RABL3	100	86.017	Macaca_fascicularis
ENSPNYG00000006659	rabl3	100	82.075	ENSMMUG00000001594	RABL3	100	82.075	Macaca_mulatta
ENSPNYG00000006659	rabl3	100	86.017	ENSMNEG00000043980	RABL3	100	86.017	Macaca_nemestrina
ENSPNYG00000006659	rabl3	100	86.017	ENSMLEG00000028177	RABL3	100	86.017	Mandrillus_leucophaeus
ENSPNYG00000006659	rabl3	100	97.854	ENSMAMG00000015155	rabl3	100	97.854	Mastacembelus_armatus
ENSPNYG00000006659	rabl3	100	99.571	ENSMZEG00005002607	rabl3	100	99.571	Maylandia_zebra
ENSPNYG00000006659	rabl3	100	83.475	ENSMAUG00000013022	Rabl3	100	83.475	Mesocricetus_auratus
ENSPNYG00000006659	rabl3	100	86.864	ENSMICG00000049288	RABL3	100	86.864	Microcebus_murinus
ENSPNYG00000006659	rabl3	100	83.051	ENSMOCG00000015237	Rabl3	100	83.051	Microtus_ochrogaster
ENSPNYG00000006659	rabl3	100	92.340	ENSMMOG00000005628	rabl3	100	92.340	Mola_mola
ENSPNYG00000006659	rabl3	100	87.288	ENSMODG00000018232	RABL3	100	87.288	Monodelphis_domestica
ENSPNYG00000006659	rabl3	100	90.678	ENSMALG00000018837	rabl3	100	90.678	Monopterus_albus
ENSPNYG00000006659	rabl3	100	83.475	MGP_CAROLIEiJ_G0020728	Rabl3	100	91.473	Mus_caroli
ENSPNYG00000006659	rabl3	100	83.475	ENSMUSG00000022827	Rabl3	100	91.473	Mus_musculus
ENSPNYG00000006659	rabl3	100	83.051	MGP_PahariEiJ_G0016429	Rabl3	100	91.473	Mus_pahari
ENSPNYG00000006659	rabl3	100	83.475	MGP_SPRETEiJ_G0021628	Rabl3	100	91.473	Mus_spretus
ENSPNYG00000006659	rabl3	100	87.288	ENSMPUG00000008257	RABL3	89	87.288	Mustela_putorius_furo
ENSPNYG00000006659	rabl3	100	86.441	ENSMLUG00000014113	RABL3	100	86.441	Myotis_lucifugus
ENSPNYG00000006659	rabl3	99	82.039	ENSNGAG00000001939	Rabl3	99	82.039	Nannospalax_galili
ENSPNYG00000006659	rabl3	93	98.618	ENSNBRG00000012423	rabl3	92	98.618	Neolamprologus_brichardi
ENSPNYG00000006659	rabl3	100	85.593	ENSNLEG00000031723	RABL3	100	85.593	Nomascus_leucogenys
ENSPNYG00000006659	rabl3	100	86.441	ENSMEUG00000006606	RABL3	100	86.441	Notamacropus_eugenii
ENSPNYG00000006659	rabl3	100	85.593	ENSODEG00000004758	-	100	85.593	Octodon_degus
ENSPNYG00000006659	rabl3	100	99.571	ENSONIG00000004281	rabl3	100	99.571	Oreochromis_niloticus
ENSPNYG00000006659	rabl3	99	85.043	ENSOANG00000003928	RABL3	99	85.043	Ornithorhynchus_anatinus
ENSPNYG00000006659	rabl3	100	95.708	ENSORLG00000020457	rabl3	100	95.708	Oryzias_latipes
ENSPNYG00000006659	rabl3	100	95.708	ENSORLG00020008991	rabl3	100	90.987	Oryzias_latipes_hni
ENSPNYG00000006659	rabl3	100	95.708	ENSORLG00015005649	rabl3	88	95.708	Oryzias_latipes_hsok
ENSPNYG00000006659	rabl3	100	96.996	ENSOMEG00000015066	rabl3	100	96.996	Oryzias_melastigma
ENSPNYG00000006659	rabl3	100	86.017	ENSOGAG00000005961	RABL3	100	86.017	Otolemur_garnettii
ENSPNYG00000006659	rabl3	100	88.136	ENSOARG00000019939	RABL3	100	88.136	Ovis_aries
ENSPNYG00000006659	rabl3	94	84.234	ENSPPAG00000036997	RABL3	87	84.234	Pan_paniscus
ENSPNYG00000006659	rabl3	100	87.288	ENSPPRG00000016325	RABL3	100	87.288	Panthera_pardus
ENSPNYG00000006659	rabl3	100	87.288	ENSPTIG00000018021	RABL3	100	87.288	Panthera_tigris_altaica
ENSPNYG00000006659	rabl3	100	85.593	ENSPTRG00000015272	RABL3	100	85.593	Pan_troglodytes
ENSPNYG00000006659	rabl3	100	86.017	ENSPANG00000001339	RABL3	100	86.017	Papio_anubis
ENSPNYG00000006659	rabl3	100	93.991	ENSPKIG00000007818	rabl3	100	93.991	Paramormyrops_kingsleyae
ENSPNYG00000006659	rabl3	100	86.017	ENSPSIG00000011358	RABL3	100	86.017	Pelodiscus_sinensis
ENSPNYG00000006659	rabl3	100	90.129	ENSPMGG00000015794	rabl3	100	90.129	Periophthalmus_magnuspinnatus
ENSPNYG00000006659	rabl3	100	83.475	ENSPEMG00000016913	Rabl3	100	83.475	Peromyscus_maniculatus_bairdii
ENSPNYG00000006659	rabl3	100	86.441	ENSPCIG00000018922	RABL3	100	86.441	Phascolarctos_cinereus
ENSPNYG00000006659	rabl3	100	95.708	ENSPFOG00000008586	rabl3	100	95.708	Poecilia_formosa
ENSPNYG00000006659	rabl3	100	95.708	ENSPLAG00000014482	rabl3	100	95.708	Poecilia_latipinna
ENSPNYG00000006659	rabl3	100	95.708	ENSPMEG00000002295	rabl3	100	95.708	Poecilia_mexicana
ENSPNYG00000006659	rabl3	100	95.279	ENSPREG00000014815	rabl3	100	95.279	Poecilia_reticulata
ENSPNYG00000006659	rabl3	100	86.017	ENSPPYG00000013501	RABL3	100	86.017	Pongo_abelii
ENSPNYG00000006659	rabl3	100	87.288	ENSPCOG00000022230	RABL3	100	87.288	Propithecus_coquereli
ENSPNYG00000006659	rabl3	100	85.593	ENSPVAG00000010013	RABL3	100	85.593	Pteropus_vampyrus
ENSPNYG00000006659	rabl3	100	96.137	ENSPNAG00000000748	rabl3	100	96.137	Pygocentrus_nattereri
ENSPNYG00000006659	rabl3	100	83.051	ENSRNOG00000026085	Rabl3	100	83.051	Rattus_norvegicus
ENSPNYG00000006659	rabl3	100	86.017	ENSRBIG00000040941	RABL3	100	86.017	Rhinopithecus_bieti
ENSPNYG00000006659	rabl3	100	86.017	ENSRROG00000043745	RABL3	100	86.017	Rhinopithecus_roxellana
ENSPNYG00000006659	rabl3	100	87.712	ENSSBOG00000004022	RABL3	100	87.712	Saimiri_boliviensis_boliviensis
ENSPNYG00000006659	rabl3	100	85.593	ENSSHAG00000012233	RABL3	100	85.593	Sarcophilus_harrisii
ENSPNYG00000006659	rabl3	100	93.991	ENSSFOG00015010171	rabl3	100	93.991	Scleropages_formosus
ENSPNYG00000006659	rabl3	100	97.009	ENSSMAG00000002403	rabl3	100	97.009	Scophthalmus_maximus
ENSPNYG00000006659	rabl3	100	98.283	ENSSDUG00000012078	rabl3	100	98.283	Seriola_dumerili
ENSPNYG00000006659	rabl3	100	98.712	ENSSLDG00000021899	rabl3	100	98.712	Seriola_lalandi_dorsalis
ENSPNYG00000006659	rabl3	100	86.864	ENSSARG00000008316	RABL3	100	86.864	Sorex_araneus
ENSPNYG00000006659	rabl3	100	86.017	ENSSPUG00000017490	RABL3	100	86.017	Sphenodon_punctatus
ENSPNYG00000006659	rabl3	100	98.712	ENSSPAG00000011642	rabl3	100	98.712	Stegastes_partitus
ENSPNYG00000006659	rabl3	100	87.712	ENSSSCG00000035258	RABL3	100	87.712	Sus_scrofa
ENSPNYG00000006659	rabl3	100	84.746	ENSTGUG00000013374	RABL3	100	84.746	Taeniopygia_guttata
ENSPNYG00000006659	rabl3	87	96.648	ENSTRUG00000007846	RABL3	100	96.875	Takifugu_rubripes
ENSPNYG00000006659	rabl3	100	73.729	ENSTBEG00000005153	RABL3	100	73.729	Tupaia_belangeri
ENSPNYG00000006659	rabl3	100	86.441	ENSUAMG00000005299	RABL3	100	86.441	Ursus_americanus
ENSPNYG00000006659	rabl3	100	86.017	ENSUMAG00000025256	RABL3	89	86.017	Ursus_maritimus
ENSPNYG00000006659	rabl3	100	87.712	ENSVPAG00000003776	RABL3	100	87.712	Vicugna_pacos
ENSPNYG00000006659	rabl3	100	87.288	ENSVVUG00000022300	RABL3	89	87.288	Vulpes_vulpes
ENSPNYG00000006659	rabl3	100	95.279	ENSXMAG00000003244	rabl3	100	95.279	Xiphophorus_maculatus