EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000006835 (Gene tree)
Gene ID: 102207633
Gene Symbol: parn
Alias: zgc:56067
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 10608 bases
Position: chrJH419350.1:877059-887666
Accession: 102207633
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000009064	RNA_bind	PF08675.11	8.9e-34	1	1
ENSPNYP00000009034	RNA_bind	PF08675.11	1.1e-33	1	1
ENSPNYP00000009034	CAF1	PF04857.20	3.4e-90	1	1
ENSPNYP00000009064	CAF1	PF04857.20	1.1e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000009274	-	1764	-	ENSPNYP00000009064	587 (aa)	-	-
ENSPNYT00000009243	-	2823	XM_005744547	ENSPNYP00000009034	676 (aa)	XP_005744604	UPI0003AF670D

Gene Model

Click here to download ENSPNYG00000006835's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000006835's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000006835	parn	90	74.674	ENSG00000140694	PARN	99	70.383	Homo_sapiens
ENSPNYG00000006835	parn	95	70.455	ENSAMEG00000011208	PARN	83	78.879	Ailuropoda_melanoleuca
ENSPNYG00000006835	parn	94	87.835	ENSACIG00000000619	parn	99	85.290	Amphilophus_citrinellus
ENSPNYG00000006835	parn	100	88.921	ENSAOCG00000003465	parn	100	89.067	Amphiprion_ocellaris
ENSPNYG00000006835	parn	90	83.865	ENSAPEG00000010661	parn	94	94.479	Amphiprion_percula
ENSPNYG00000006835	parn	100	89.781	ENSATEG00000004661	parn	100	90.073	Anabas_testudineus
ENSPNYG00000006835	parn	94	70.796	ENSAPLG00000013914	PARN	91	74.483	Anas_platyrhynchos
ENSPNYG00000006835	parn	95	71.379	ENSACAG00000004973	PARN	98	70.110	Anolis_carolinensis
ENSPNYG00000006835	parn	90	74.115	ENSANAG00000031516	PARN	91	77.966	Aotus_nancymaae
ENSPNYG00000006835	parn	100	99.116	ENSACLG00000004742	parn	100	99.116	Astatotilapia_calliptera
ENSPNYG00000006835	parn	100	72.419	ENSAMXG00000012390	parn	96	76.768	Astyanax_mexicanus
ENSPNYG00000006835	parn	95	71.150	ENSBTAG00000018097	PARN	90	73.805	Bos_taurus
ENSPNYG00000006835	parn	90	74.674	ENSCJAG00000015866	PARN	91	77.966	Callithrix_jacchus
ENSPNYG00000006835	parn	98	69.521	ENSCAFG00000018795	PARN	98	69.767	Canis_familiaris
ENSPNYG00000006835	parn	98	69.863	ENSCAFG00020024126	PARN	98	70.078	Canis_lupus_dingo
ENSPNYG00000006835	parn	95	70.928	ENSCHIG00000018143	PARN	94	72.323	Capra_hircus
ENSPNYG00000006835	parn	79	48.017	ENSCAPG00000007984	PARN	78	51.351	Cavia_aperea
ENSPNYG00000006835	parn	90	73.184	ENSCPOG00000002263	PARN	91	73.801	Cavia_porcellus
ENSPNYG00000006835	parn	90	74.674	ENSCCAG00000030367	PARN	91	77.966	Cebus_capucinus
ENSPNYG00000006835	parn	100	65.886	ENSCATG00000041368	PARN	100	77.966	Cercocebus_atys
ENSPNYG00000006835	parn	51	32.414	ENSCATG00000033196	PNLDC1	72	32.414	Cercocebus_atys
ENSPNYG00000006835	parn	90	73.743	ENSCLAG00000015406	PARN	91	73.810	Chinchilla_lanigera
ENSPNYG00000006835	parn	90	74.674	ENSCSAG00000008142	PARN	92	74.199	Chlorocebus_sabaeus
ENSPNYG00000006835	parn	94	56.738	ENSCHOG00000007014	PARN	91	58.031	Choloepus_hoffmanni
ENSPNYG00000006835	parn	85	70.980	ENSCPBG00000006609	PARN	90	75.191	Chrysemys_picta_bellii
ENSPNYG00000006835	parn	87	41.308	ENSCING00000010142	-	99	42.322	Ciona_intestinalis
ENSPNYG00000006835	parn	90	62.727	ENSCANG00000028849	-	89	77.966	Colobus_angolensis_palliatus
ENSPNYG00000006835	parn	92	71.095	ENSCGRG00001012096	Parn	100	65.149	Cricetulus_griseus_chok1gshd
ENSPNYG00000006835	parn	92	71.095	ENSCGRG00000004939	Parn	100	65.149	Cricetulus_griseus_crigri
ENSPNYG00000006835	parn	100	82.558	ENSCSEG00000002064	parn	100	82.558	Cynoglossus_semilaevis
ENSPNYG00000006835	parn	100	85.380	ENSCVAG00000014848	parn	100	85.088	Cyprinodon_variegatus
ENSPNYG00000006835	parn	100	67.493	ENSDARG00000102634	parn	100	67.347	Danio_rerio
ENSPNYG00000006835	parn	95	70.928	ENSDNOG00000000833	PARN	94	79.213	Dasypus_novemcinctus
ENSPNYG00000006835	parn	72	71.161	ENSETEG00000014828	-	69	75.758	Echinops_telfairi
ENSPNYG00000006835	parn	90	73.184	ENSEASG00005011400	PARN	97	69.111	Equus_asinus_asinus
ENSPNYG00000006835	parn	90	72.998	ENSECAG00000017792	PARN	97	68.955	Equus_caballus
ENSPNYG00000006835	parn	74	61.905	ENSEEUG00000010370	PARN	78	63.964	Erinaceus_europaeus
ENSPNYG00000006835	parn	100	75.472	ENSELUG00000013139	parn	90	75.762	Esox_lucius
ENSPNYG00000006835	parn	98	70.205	ENSFCAG00000044961	PARN	87	76.271	Felis_catus
ENSPNYG00000006835	parn	94	70.745	ENSFALG00000003911	PARN	90	74.271	Ficedula_albicollis
ENSPNYG00000006835	parn	93	72.152	ENSFDAG00000009234	PARN	90	74.739	Fukomys_damarensis
ENSPNYG00000006835	parn	93	77.660	ENSFHEG00000013738	parn	92	91.525	Fundulus_heteroclitus
ENSPNYG00000006835	parn	93	80.289	ENSGMOG00000003231	parn	99	85.273	Gadus_morhua
ENSPNYG00000006835	parn	100	65.367	ENSGALG00000003091	PARN	92	74.315	Gallus_gallus
ENSPNYG00000006835	parn	100	84.425	ENSGAFG00000011061	parn	100	83.697	Gambusia_affinis
ENSPNYG00000006835	parn	100	76.531	ENSGACG00000019501	parn	100	76.822	Gasterosteus_aculeatus
ENSPNYG00000006835	parn	90	74.674	ENSGGOG00000025224	PARN	94	75.000	Gorilla_gorilla
ENSPNYG00000006835	parn	100	99.558	ENSHBUG00000017906	parn	100	99.558	Haplochromis_burtoni
ENSPNYG00000006835	parn	90	73.184	ENSHGLG00000010886	PARN	91	73.459	Heterocephalus_glaber_female
ENSPNYG00000006835	parn	90	73.184	ENSHGLG00100014659	PARN	91	73.459	Heterocephalus_glaber_male
ENSPNYG00000006835	parn	99	76.370	ENSHCOG00000008683	parn	94	84.249	Hippocampus_comes
ENSPNYG00000006835	parn	100	61.863	ENSIPUG00000012401	parn	100	61.773	Ictalurus_punctatus
ENSPNYG00000006835	parn	100	64.912	ENSSTOG00000007519	PARN	100	64.646	Ictidomys_tridecemlineatus
ENSPNYG00000006835	parn	100	65.190	ENSJJAG00000023049	Parn	91	74.346	Jaculus_jaculus
ENSPNYG00000006835	parn	100	86.842	ENSKMAG00000009462	parn	100	86.842	Kryptolebias_marmoratus
ENSPNYG00000006835	parn	93	88.871	ENSLBEG00000009167	parn	100	88.558	Labrus_bergylta
ENSPNYG00000006835	parn	85	70.611	ENSLACG00000004207	PARN	100	75.708	Latimeria_chalumnae
ENSPNYG00000006835	parn	100	71.965	ENSLOCG00000000715	parn	100	72.595	Lepisosteus_oculatus
ENSPNYG00000006835	parn	90	74.488	ENSLAFG00000015036	PARN	99	70.186	Loxodonta_africana
ENSPNYG00000006835	parn	90	72.761	ENSMFAG00000044852	PARN	89	77.966	Macaca_fascicularis
ENSPNYG00000006835	parn	90	74.674	ENSMMUG00000018849	PARN	89	77.966	Macaca_mulatta
ENSPNYG00000006835	parn	90	74.674	ENSMNEG00000045108	PARN	89	77.966	Macaca_nemestrina
ENSPNYG00000006835	parn	90	74.488	ENSMLEG00000031743	PARN	89	77.966	Mandrillus_leucophaeus
ENSPNYG00000006835	parn	100	89.956	ENSMAMG00000006939	parn	100	89.956	Mastacembelus_armatus
ENSPNYG00000006835	parn	100	99.264	ENSMZEG00005013590	parn	100	99.264	Maylandia_zebra
ENSPNYG00000006835	parn	94	69.449	ENSMGAG00000001004	PARN	90	72.396	Meleagris_gallopavo
ENSPNYG00000006835	parn	100	60.526	ENSMAUG00000008025	Parn	100	60.681	Mesocricetus_auratus
ENSPNYG00000006835	parn	95	70.928	ENSMICG00000016053	PARN	98	76.271	Microcebus_murinus
ENSPNYG00000006835	parn	83	73.695	ENSMOCG00000022211	Parn	100	79.192	Microtus_ochrogaster
ENSPNYG00000006835	parn	100	78.956	ENSMMOG00000011333	parn	100	78.956	Mola_mola
ENSPNYG00000006835	parn	83	75.600	ENSMODG00000004915	PARN	99	81.087	Monodelphis_domestica
ENSPNYG00000006835	parn	96	89.650	ENSMALG00000019426	parn	94	94.043	Monopterus_albus
ENSPNYG00000006835	parn	95	68.959	MGP_CAROLIEiJ_G0020466	Parn	91	72.241	Mus_caroli
ENSPNYG00000006835	parn	95	68.007	ENSMUSG00000022685	Parn	100	75.610	Mus_musculus
ENSPNYG00000006835	parn	95	69.136	MGP_PahariEiJ_G0016172	Parn	91	73.010	Mus_pahari
ENSPNYG00000006835	parn	90	71.004	MGP_SPRETEiJ_G0021361	Parn	92	72.137	Mus_spretus
ENSPNYG00000006835	parn	98	70.034	ENSMPUG00000014464	PARN	90	74.740	Mustela_putorius_furo
ENSPNYG00000006835	parn	83	72.892	ENSMLUG00000005414	PARN	100	78.586	Myotis_lucifugus
ENSPNYG00000006835	parn	100	91.568	ENSNBRG00000006805	parn	100	91.568	Neolamprologus_brichardi
ENSPNYG00000006835	parn	90	74.488	ENSNLEG00000010241	PARN	91	77.966	Nomascus_leucogenys
ENSPNYG00000006835	parn	82	65.000	ENSMEUG00000008178	-	77	65.000	Notamacropus_eugenii
ENSPNYG00000006835	parn	89	70.699	ENSOPRG00000012187	PARN	92	69.191	Ochotona_princeps
ENSPNYG00000006835	parn	90	68.646	ENSODEG00000001617	PARN	100	61.943	Octodon_degus
ENSPNYG00000006835	parn	100	98.527	ENSONIG00000000151	parn	100	98.527	Oreochromis_niloticus
ENSPNYG00000006835	parn	92	72.943	ENSOCUG00000000322	PARN	91	75.087	Oryctolagus_cuniculus
ENSPNYG00000006835	parn	100	82.206	ENSORLG00020010313	parn	100	82.206	Oryzias_latipes_hni
ENSPNYG00000006835	parn	100	81.912	ENSORLG00015000300	parn	100	81.912	Oryzias_latipes_hsok
ENSPNYG00000006835	parn	100	80.966	ENSOMEG00000019555	parn	100	80.820	Oryzias_melastigma
ENSPNYG00000006835	parn	83	73.547	ENSOGAG00000014626	PARN	100	79.032	Otolemur_garnettii
ENSPNYG00000006835	parn	83	74.498	ENSOARG00000007574	PARN	100	80.000	Ovis_aries
ENSPNYG00000006835	parn	90	74.488	ENSPPAG00000031438	PARN	91	77.966	Pan_paniscus
ENSPNYG00000006835	parn	98	70.205	ENSPPRG00000018583	PARN	87	76.271	Panthera_pardus
ENSPNYG00000006835	parn	98	70.205	ENSPTIG00000012135	PARN	87	76.271	Panthera_tigris_altaica
ENSPNYG00000006835	parn	90	74.488	ENSPTRG00000007792	PARN	91	77.966	Pan_troglodytes
ENSPNYG00000006835	parn	90	72.253	ENSPANG00000020099	PARN	89	77.966	Papio_anubis
ENSPNYG00000006835	parn	93	77.034	ENSPKIG00000022807	parn	90	76.256	Paramormyrops_kingsleyae
ENSPNYG00000006835	parn	95	71.454	ENSPSIG00000014804	PARN	91	74.872	Pelodiscus_sinensis
ENSPNYG00000006835	parn	94	79.821	ENSPMGG00000014431	parn	85	79.902	Periophthalmus_magnuspinnatus
ENSPNYG00000006835	parn	95	70.179	ENSPEMG00000018439	Parn	91	71.626	Peromyscus_maniculatus_bairdii
ENSPNYG00000006835	parn	87	64.299	ENSPMAG00000003956	parn	98	69.171	Petromyzon_marinus
ENSPNYG00000006835	parn	71	68.852	ENSPCIG00000001259	PARN	91	77.966	Phascolarctos_cinereus
ENSPNYG00000006835	parn	100	84.964	ENSPFOG00000012823	parn	100	84.964	Poecilia_formosa
ENSPNYG00000006835	parn	100	85.109	ENSPLAG00000006395	parn	100	85.109	Poecilia_latipinna
ENSPNYG00000006835	parn	100	85.109	ENSPMEG00000007711	parn	100	85.109	Poecilia_mexicana
ENSPNYG00000006835	parn	100	85.109	ENSPREG00000000147	parn	100	85.109	Poecilia_reticulata
ENSPNYG00000006835	parn	90	74.026	ENSPPYG00000007123	PARN	91	74.276	Pongo_abelii
ENSPNYG00000006835	parn	90	64.126	ENSPCAG00000001741	PARN	92	64.158	Procavia_capensis
ENSPNYG00000006835	parn	95	68.430	ENSPCOG00000019292	PARN	98	76.271	Propithecus_coquereli
ENSPNYG00000006835	parn	94	67.851	ENSPVAG00000002547	PARN	90	71.553	Pteropus_vampyrus
ENSPNYG00000006835	parn	93	72.484	ENSPNAG00000018905	parn	100	72.484	Pygocentrus_nattereri
ENSPNYG00000006835	parn	95	69.056	ENSRNOG00000002912	Parn	96	79.592	Rattus_norvegicus
ENSPNYG00000006835	parn	90	74.627	ENSSBOG00000034726	PARN	89	77.966	Saimiri_boliviensis_boliviensis
ENSPNYG00000006835	parn	70	73.159	ENSSHAG00000008493	PARN	93	79.665	Sarcophilus_harrisii
ENSPNYG00000006835	parn	100	71.184	ENSSFOG00015014165	parn	98	75.966	Scleropages_formosus
ENSPNYG00000006835	parn	100	84.120	ENSSMAG00000000685	parn	100	84.549	Scophthalmus_maximus
ENSPNYG00000006835	parn	100	90.684	ENSSDUG00000014555	parn	100	90.393	Seriola_dumerili
ENSPNYG00000006835	parn	73	75.114	ENSSARG00000014339	PARN	75	81.149	Sorex_araneus
ENSPNYG00000006835	parn	95	70.928	ENSSPUG00000007719	PARN	91	75.000	Sphenodon_punctatus
ENSPNYG00000006835	parn	100	90.029	ENSSPAG00000007095	parn	100	90.029	Stegastes_partitus
ENSPNYG00000006835	parn	98	69.692	ENSSSCG00000007878	PARN	88	69.592	Sus_scrofa
ENSPNYG00000006835	parn	94	70.973	ENSTGUG00000004971	PARN	94	72.517	Taeniopygia_guttata
ENSPNYG00000006835	parn	100	78.184	ENSTNIG00000008252	parn	100	78.917	Tetraodon_nigroviridis
ENSPNYG00000006835	parn	80	61.506	ENSTBEG00000010407	PARN	90	62.928	Tupaia_belangeri
ENSPNYG00000006835	parn	94	66.312	ENSTTRG00000002843	PARN	94	68.106	Tursiops_truncatus
ENSPNYG00000006835	parn	73	68.950	ENSUAMG00000008283	PARN	94	68.192	Ursus_americanus
ENSPNYG00000006835	parn	95	70.753	ENSUMAG00000004527	PARN	83	79.213	Ursus_maritimus
ENSPNYG00000006835	parn	89	73.585	ENSVPAG00000008968	PARN	93	71.034	Vicugna_pacos
ENSPNYG00000006835	parn	98	69.863	ENSVVUG00000019509	PARN	98	70.078	Vulpes_vulpes
ENSPNYG00000006835	parn	90	71.375	ENSXETG00000010994	parn	100	76.894	Xenopus_tropicalis
ENSPNYG00000006835	parn	93	80.216	ENSXCOG00000015990	parn	99	83.502	Xiphophorus_couchianus
ENSPNYG00000006835	parn	100	83.504	ENSXMAG00000014783	parn	100	83.212	Xiphophorus_maculatus