EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNYG00000006975 (Gene tree)
Gene ID: 106456518
Gene Symbol: nom1
Alias: si:ch211-266o5.1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Pundamilia_nyererei
Status: putative
Strand: Plus strand
Length: 11790 bases
Position: chrJH419212.1:7357601-7369390
Accession: 106456518
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNYP00000009202	MA3	PF02847.17	3.1e-22	1	1
ENSPNYP00000009211	MA3	PF02847.17	8.6e-22	1	1
ENSPNYP00000009211	MIF4G	PF02854.19	4.9e-21	1	1
ENSPNYP00000009202	MIF4G	PF02854.19	8.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNYT00000009425	-	3030	XM_013915676	ENSPNYP00000009211	837 (aa)	XP_013771130	UPI0006AB2B7A
ENSPNYT00000009416	-	1662	-	ENSPNYP00000009202	553 (aa)	-	-

Gene Model

Click here to download ENSPNYG00000006975's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNYG00000006975's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNYG00000006975	nom1	97	66.790	ENSG00000146909	NOM1	85	57.938	Homo_sapiens
ENSPNYG00000006975	nom1	96	89.474	ENSAPOG00000012073	nom1	100	76.807	Acanthochromis_polyacanthus
ENSPNYG00000006975	nom1	97	63.720	ENSAMEG00000001412	NOM1	99	55.631	Ailuropoda_melanoleuca
ENSPNYG00000006975	nom1	95	92.176	ENSACIG00000018050	nom1	67	92.557	Amphilophus_citrinellus
ENSPNYG00000006975	nom1	96	88.910	ENSAOCG00000006229	nom1	100	77.103	Amphiprion_ocellaris
ENSPNYG00000006975	nom1	96	88.910	ENSAPEG00000015994	nom1	100	76.601	Amphiprion_percula
ENSPNYG00000006975	nom1	96	87.030	ENSATEG00000005405	nom1	100	75.566	Anabas_testudineus
ENSPNYG00000006975	nom1	95	65.909	ENSAPLG00000006585	NOM1	80	65.909	Anas_platyrhynchos
ENSPNYG00000006975	nom1	98	64.168	ENSACAG00000011192	NOM1	63	65.242	Anolis_carolinensis
ENSPNYG00000006975	nom1	100	99.164	ENSACLG00000000033	nom1	100	99.230	Astatotilapia_calliptera
ENSPNYG00000006975	nom1	97	73.840	ENSAMXG00000041486	nom1	63	73.616	Astyanax_mexicanus
ENSPNYG00000006975	nom1	97	63.704	ENSBTAG00000016435	NOM1	63	63.704	Bos_taurus
ENSPNYG00000006975	nom1	97	65.741	ENSCJAG00000004336	NOM1	95	53.486	Callithrix_jacchus
ENSPNYG00000006975	nom1	95	65.217	ENSCAFG00020005121	NOM1	83	55.116	Canis_lupus_dingo
ENSPNYG00000006975	nom1	95	64.326	ENSCHIG00000020102	NOM1	63	64.030	Capra_hircus
ENSPNYG00000006975	nom1	97	65.741	ENSTSYG00000000227	NOM1	65	65.498	Carlito_syrichta
ENSPNYG00000006975	nom1	93	68.208	ENSCAPG00000016273	NOM1	99	68.208	Cavia_aperea
ENSPNYG00000006975	nom1	96	62.734	ENSCPOG00000025538	NOM1	96	50.955	Cavia_porcellus
ENSPNYG00000006975	nom1	89	68.483	ENSCCAG00000014944	NOM1	99	67.514	Cebus_capucinus
ENSPNYG00000006975	nom1	96	64.607	ENSCLAG00000000267	NOM1	63	64.607	Chinchilla_lanigera
ENSPNYG00000006975	nom1	96	66.791	ENSCPBG00000018215	NOM1	74	66.667	Chrysemys_picta_bellii
ENSPNYG00000006975	nom1	89	42.626	ENSCING00000005248	-	67	42.600	Ciona_intestinalis
ENSPNYG00000006975	nom1	95	66.541	ENSCANG00000041984	NOM1	91	66.541	Colobus_angolensis_palliatus
ENSPNYG00000006975	nom1	97	65.185	ENSCGRG00001020293	Nom1	80	58.730	Cricetulus_griseus_chok1gshd
ENSPNYG00000006975	nom1	93	66.859	ENSCGRG00000005405	Nom1	97	66.859	Cricetulus_griseus_crigri
ENSPNYG00000006975	nom1	90	81.855	ENSCSEG00000000932	nom1	96	68.103	Cynoglossus_semilaevis
ENSPNYG00000006975	nom1	97	84.112	ENSCVAG00000007562	nom1	98	72.573	Cyprinodon_variegatus
ENSPNYG00000006975	nom1	95	75.947	ENSDARG00000060027	nom1	100	75.975	Danio_rerio
ENSPNYG00000006975	nom1	94	57.414	ENSDORG00000015682	Nom1	79	55.776	Dipodomys_ordii
ENSPNYG00000006975	nom1	90	38.039	FBgn0035336	CG9004	60	38.104	Drosophila_melanogaster
ENSPNYG00000006975	nom1	76	57.381	ENSETEG00000003104	NOM1	71	57.381	Echinops_telfairi
ENSPNYG00000006975	nom1	78	52.620	ENSEBUG00000010077	nom1	96	52.620	Eptatretus_burgeri
ENSPNYG00000006975	nom1	97	66.728	ENSEASG00005001489	NOM1	63	67.290	Equus_asinus_asinus
ENSPNYG00000006975	nom1	95	67.547	ENSECAG00000007596	NOM1	57	67.547	Equus_caballus
ENSPNYG00000006975	nom1	96	80.189	ENSELUG00000006266	nom1	98	67.186	Esox_lucius
ENSPNYG00000006975	nom1	97	64.576	ENSFCAG00000006467	NOM1	84	57.001	Felis_catus
ENSPNYG00000006975	nom1	95	67.871	ENSFALG00000006904	NOM1	99	58.203	Ficedula_albicollis
ENSPNYG00000006975	nom1	96	65.038	ENSFDAG00000016241	NOM1	64	65.038	Fukomys_damarensis
ENSPNYG00000006975	nom1	97	83.364	ENSFHEG00000015974	nom1	98	73.812	Fundulus_heteroclitus
ENSPNYG00000006975	nom1	94	74.138	ENSGMOG00000005129	nom1	69	73.120	Gadus_morhua
ENSPNYG00000006975	nom1	95	65.399	ENSGALG00000006437	NOM1	81	54.217	Gallus_gallus
ENSPNYG00000006975	nom1	97	83.178	ENSGAFG00000003211	nom1	98	73.277	Gambusia_affinis
ENSPNYG00000006975	nom1	95	67.486	ENSGAGG00000014347	NOM1	64	67.486	Gopherus_agassizii
ENSPNYG00000006975	nom1	97	66.236	ENSGGOG00000010920	NOM1	88	54.096	Gorilla_gorilla
ENSPNYG00000006975	nom1	100	98.327	ENSHBUG00000014616	nom1	100	98.460	Haplochromis_burtoni
ENSPNYG00000006975	nom1	95	66.983	ENSHGLG00000007392	NOM1	61	66.983	Heterocephalus_glaber_female
ENSPNYG00000006975	nom1	95	66.983	ENSHGLG00100014407	NOM1	61	66.983	Heterocephalus_glaber_male
ENSPNYG00000006975	nom1	58	77.358	ENSHCOG00000011999	-	86	76.543	Hippocampus_comes
ENSPNYG00000006975	nom1	97	71.269	ENSIPUG00000013980	nom1	63	72.401	Ictalurus_punctatus
ENSPNYG00000006975	nom1	96	66.667	ENSSTOG00000031736	NOM1	94	66.667	Ictidomys_tridecemlineatus
ENSPNYG00000006975	nom1	88	68.866	ENSJJAG00000011716	Nom1	98	68.866	Jaculus_jaculus
ENSPNYG00000006975	nom1	98	83.272	ENSLBEG00000009252	nom1	100	72.203	Labrus_bergylta
ENSPNYG00000006975	nom1	95	69.418	ENSLACG00000011777	NOM1	95	58.291	Latimeria_chalumnae
ENSPNYG00000006975	nom1	97	74.532	ENSLOCG00000012452	nom1	67	74.860	Lepisosteus_oculatus
ENSPNYG00000006975	nom1	99	59.165	ENSLAFG00000007119	NOM1	67	59.165	Loxodonta_africana
ENSPNYG00000006975	nom1	97	62.018	ENSMMUG00000039033	NOM1	62	62.799	Macaca_mulatta
ENSPNYG00000006975	nom1	95	66.919	ENSMLEG00000037062	NOM1	99	66.919	Mandrillus_leucophaeus
ENSPNYG00000006975	nom1	98	82.721	ENSMAMG00000004118	nom1	98	75.060	Mastacembelus_armatus
ENSPNYG00000006975	nom1	100	99.044	ENSMZEG00005000384	nom1	100	99.044	Maylandia_zebra
ENSPNYG00000006975	nom1	95	65.530	ENSMGAG00000005051	NOM1	77	65.530	Meleagris_gallopavo
ENSPNYG00000006975	nom1	97	65.370	ENSMAUG00000017988	Nom1	85	57.359	Mesocricetus_auratus
ENSPNYG00000006975	nom1	95	65.537	ENSMICG00000017531	NOM1	63	65.537	Microcebus_murinus
ENSPNYG00000006975	nom1	97	65.370	ENSMOCG00000015962	Nom1	95	53.461	Microtus_ochrogaster
ENSPNYG00000006975	nom1	96	78.755	ENSMMOG00000004419	nom1	99	69.240	Mola_mola
ENSPNYG00000006975	nom1	97	68.266	ENSMODG00000005177	NOM1	81	60.969	Monodelphis_domestica
ENSPNYG00000006975	nom1	87	86.957	ENSMALG00000008800	nom1	98	74.710	Monopterus_albus
ENSPNYG00000006975	nom1	97	64.444	MGP_CAROLIEiJ_G0027043	Nom1	94	52.210	Mus_caroli
ENSPNYG00000006975	nom1	97	64.259	ENSMUSG00000001569	Nom1	94	52.638	Mus_musculus
ENSPNYG00000006975	nom1	97	64.444	MGP_SPRETEiJ_G0028039	Nom1	94	52.262	Mus_spretus
ENSPNYG00000006975	nom1	95	62.760	ENSMPUG00000009745	NOM1	99	55.747	Mustela_putorius_furo
ENSPNYG00000006975	nom1	95	66.919	ENSMLUG00000009129	NOM1	88	66.919	Myotis_lucifugus
ENSPNYG00000006975	nom1	100	97.139	ENSNBRG00000016429	nom1	100	97.139	Neolamprologus_brichardi
ENSPNYG00000006975	nom1	97	64.890	ENSNLEG00000000238	NOM1	95	53.061	Nomascus_leucogenys
ENSPNYG00000006975	nom1	81	69.565	ENSMEUG00000001108	NOM1	74	54.066	Notamacropus_eugenii
ENSPNYG00000006975	nom1	80	56.818	ENSOPRG00000014676	NOM1	70	49.789	Ochotona_princeps
ENSPNYG00000006975	nom1	94	65.326	ENSODEG00000009399	NOM1	98	57.775	Octodon_degus
ENSPNYG00000006975	nom1	97	95.327	ENSONIG00000005958	nom1	100	95.802	Oreochromis_niloticus
ENSPNYG00000006975	nom1	84	68.251	ENSOANG00000006139	-	97	68.251	Ornithorhynchus_anatinus
ENSPNYG00000006975	nom1	97	53.945	ENSOCUG00000021448	-	91	47.541	Oryctolagus_cuniculus
ENSPNYG00000006975	nom1	97	66.421	ENSOCUG00000004071	-	85	58.276	Oryctolagus_cuniculus
ENSPNYG00000006975	nom1	96	84.023	ENSORLG00000010541	nom1	98	73.633	Oryzias_latipes
ENSPNYG00000006975	nom1	96	84.023	ENSORLG00020010789	nom1	99	74.160	Oryzias_latipes_hni
ENSPNYG00000006975	nom1	96	83.835	ENSORLG00015010475	nom1	99	74.548	Oryzias_latipes_hsok
ENSPNYG00000006975	nom1	96	84.230	ENSOMEG00000004219	nom1	98	74.396	Oryzias_melastigma
ENSPNYG00000006975	nom1	95	66.415	ENSOGAG00000001124	NOM1	88	65.556	Otolemur_garnettii
ENSPNYG00000006975	nom1	95	64.326	ENSOARG00000007261	NOM1	71	64.326	Ovis_aries
ENSPNYG00000006975	nom1	97	66.421	ENSPPAG00000041374	NOM1	95	54.217	Pan_paniscus
ENSPNYG00000006975	nom1	97	64.273	ENSPTIG00000013532	NOM1	94	57.021	Panthera_tigris_altaica
ENSPNYG00000006975	nom1	97	66.421	ENSPTRG00000019917	NOM1	95	54.096	Pan_troglodytes
ENSPNYG00000006975	nom1	97	66.052	ENSPANG00000007605	NOM1	62	66.296	Papio_anubis
ENSPNYG00000006975	nom1	95	70.132	ENSPKIG00000005825	nom1	98	59.521	Paramormyrops_kingsleyae
ENSPNYG00000006975	nom1	98	66.912	ENSPSIG00000017848	NOM1	90	66.912	Pelodiscus_sinensis
ENSPNYG00000006975	nom1	97	84.328	ENSPMGG00000002577	nom1	100	70.868	Periophthalmus_magnuspinnatus
ENSPNYG00000006975	nom1	97	66.111	ENSPEMG00000024180	Nom1	63	66.111	Peromyscus_maniculatus_bairdii
ENSPNYG00000006975	nom1	98	66.788	ENSPCIG00000027941	NOM1	61	66.788	Phascolarctos_cinereus
ENSPNYG00000006975	nom1	97	84.299	ENSPFOG00000015771	nom1	98	74.517	Poecilia_formosa
ENSPNYG00000006975	nom1	97	84.673	ENSPLAG00000007856	nom1	98	73.633	Poecilia_latipinna
ENSPNYG00000006975	nom1	97	84.112	ENSPMEG00000014155	nom1	98	74.758	Poecilia_mexicana
ENSPNYG00000006975	nom1	97	83.925	ENSPREG00000008850	nom1	98	74.213	Poecilia_reticulata
ENSPNYG00000006975	nom1	97	60.886	ENSPPYG00000018222	NOM1	95	50.542	Pongo_abelii
ENSPNYG00000006975	nom1	78	62.093	ENSPCAG00000000440	NOM1	79	62.326	Procavia_capensis
ENSPNYG00000006975	nom1	95	65.226	ENSPCOG00000015222	NOM1	99	65.909	Propithecus_coquereli
ENSPNYG00000006975	nom1	97	63.720	ENSPVAG00000014760	NOM1	95	52.038	Pteropus_vampyrus
ENSPNYG00000006975	nom1	98	72.243	ENSPNAG00000011085	nom1	61	72.243	Pygocentrus_nattereri
ENSPNYG00000006975	nom1	93	62.428	ENSRNOG00000048969	AABR07059041.1	64	62.620	Rattus_norvegicus
ENSPNYG00000006975	nom1	97	66.174	ENSRBIG00000037042	NOM1	63	66.174	Rhinopithecus_bieti
ENSPNYG00000006975	nom1	97	65.804	ENSRROG00000037293	NOM1	63	65.804	Rhinopithecus_roxellana
ENSPNYG00000006975	nom1	75	62.740	ENSSHAG00000002835	-	99	63.680	Sarcophilus_harrisii
ENSPNYG00000006975	nom1	96	69.159	ENSSHAG00000017998	-	79	68.901	Sarcophilus_harrisii
ENSPNYG00000006975	nom1	88	72.634	ENSSFOG00015003196	nom1	100	72.840	Scleropages_formosus
ENSPNYG00000006975	nom1	98	85.240	ENSSMAG00000011047	nom1	98	76.506	Scophthalmus_maximus
ENSPNYG00000006975	nom1	97	85.900	ENSSDUG00000006834	nom1	100	76.796	Seriola_dumerili
ENSPNYG00000006975	nom1	97	85.475	ENSSLDG00000021812	nom1	100	75.235	Seriola_lalandi_dorsalis
ENSPNYG00000006975	nom1	95	56.180	ENSSPUG00000002556	NOM1	100	54.938	Sphenodon_punctatus
ENSPNYG00000006975	nom1	96	88.722	ENSSPAG00000000953	nom1	100	77.225	Stegastes_partitus
ENSPNYG00000006975	nom1	61	66.374	ENSTGUG00000016587	-	100	66.374	Taeniopygia_guttata
ENSPNYG00000006975	nom1	99	65.405	ENSTGUG00000000702	-	79	65.405	Taeniopygia_guttata
ENSPNYG00000006975	nom1	97	81.262	ENSTRUG00000010239	nom1	98	71.100	Takifugu_rubripes
ENSPNYG00000006975	nom1	98	78.889	ENSTNIG00000012783	nom1	100	69.395	Tetraodon_nigroviridis
ENSPNYG00000006975	nom1	96	65.730	ENSTTRG00000009691	NOM1	93	53.163	Tursiops_truncatus
ENSPNYG00000006975	nom1	97	64.140	ENSUAMG00000025450	NOM1	62	64.140	Ursus_americanus
ENSPNYG00000006975	nom1	97	64.088	ENSUMAG00000014275	NOM1	97	55.616	Ursus_maritimus
ENSPNYG00000006975	nom1	95	65.849	ENSVVUG00000002608	NOM1	62	65.421	Vulpes_vulpes
ENSPNYG00000006975	nom1	90	66.265	ENSXETG00000021611	nom1	82	72.195	Xenopus_tropicalis
ENSPNYG00000006975	nom1	97	83.364	ENSXMAG00000002451	nom1	98	73.398	Xiphophorus_maculatus